| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21241378
Identifier: 21241378
GI number: 21241378
Start: 712820
End: 713812
Strand: Direct
Name: 21241378
Synonym: XAC0607
Alternate gene names: NA
Gene position: 712820-713812 (Clockwise)
Preceding gene: 21241377
Following gene: 21241381
Centisome position: 13.77
GC content: 67.77
Gene sequence:
>993_bases GTGATTACCCGCAGGAAGGAAGCGCTTGTTCCGCATGTCGCCGCTGTCGCATGCACGGGCGCCATCCTGTTCTTTCTTGC CTGCCTGTTGCTGTACATGCCGCCGCCGCGCCAAACCCTGCAACACGACGACACGTTGCAGGTGTATTTCGTGCCGCGAC CGCAAGAGACGCCGCCGACACCACAGCAACCGCCGCAGGAGCCCGAGCGCAAACCGCGCGTTGCCTCGGCCGCGCGTGCG GCGCCGCCAGCCACGCGCACGCCGCCACCGCCGCGGCAGCTGGCAGCCGCCACTGCGCCTGCCAGCGATTCCATGTCGGC CCAGCTGTATACCCGCGACGGGCGCCTGCGCATGGCGCAGGTGGACCCCATGGCGCAGACCGGCAGTGCGGTGCCGCCGG GGATGACCGACGAACGCGCGCAGGCCAAGGCGCGCAAGATCATGGAGCGGGTCAACCCGGTGCAATACCAGGAAACCCGC TTCGCCAAGGATTGGAAGAGCGATGGCACCTTGGGCGATGTGGCGGTGCAGGAAATGAATCGCGGCATGAAGAAGTTCAA CGACATGCTCAACGGGCCGCAGACCCAGGTTGCCAAGGCGCGTCCGCCGCCGGAGGTGCGCTTCAATCCCGCGCTTGCCG GCAATCAGGCCGAGATGGGCAGCGAGGCGACGGGCGATGCCTATAAGTCCGCGCCGATTGCGCATGAAACGCTGCCCGAC CTCAAGGGTGAAGCCAGCCGTCGCATCCGCGAGGCATTGGCGGCGCTGGAACAGCGCAGTGCGCGTTGCGATGCCTCCAG GCGCACGTCGCTGTTGTCGCCGGTGCGCACGCACCTGTCGGATCTGGAACGCGCCGAGCACGCCTTGAACAACGGCGCCG ACCCGGTGGTGGCCGCACAGATGTTGCCGCGTCAGGCCGACAGCGCATACGACCTGGCCCGTCGCGCGCTGTGGTACGCC GATCGCCAGTTGAAGCAGTGCGCGCTGGGGTGA
Upstream 100 bases:
>100_bases ACAAACGCGCGCCGGCGCTGTGCCCGCTAGATTTGCGCGTCGCACATCACGGTTCGCTGTGTGCGGCATCGGCACTCTCA TCTCATCGGTCTCCCGCATT
Downstream 100 bases:
>100_bases AAGGCGCGTTTGTGGTGCTGTGTAGACGCAGCTGGGAATGCGGCAGTGTCATCGCGAGATTCAGCAATTCAGTGCCGCCG CACCTTCACCCCAACCCCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 330; Mature: 330
Protein sequence:
>330_residues MITRRKEALVPHVAAVACTGAILFFLACLLLYMPPPRQTLQHDDTLQVYFVPRPQETPPTPQQPPQEPERKPRVASAARA APPATRTPPPPRQLAAATAPASDSMSAQLYTRDGRLRMAQVDPMAQTGSAVPPGMTDERAQAKARKIMERVNPVQYQETR FAKDWKSDGTLGDVAVQEMNRGMKKFNDMLNGPQTQVAKARPPPEVRFNPALAGNQAEMGSEATGDAYKSAPIAHETLPD LKGEASRRIREALAALEQRSARCDASRRTSLLSPVRTHLSDLERAEHALNNGADPVVAAQMLPRQADSAYDLARRALWYA DRQLKQCALG
Sequences:
>Translated_330_residues MITRRKEALVPHVAAVACTGAILFFLACLLLYMPPPRQTLQHDDTLQVYFVPRPQETPPTPQQPPQEPERKPRVASAARA APPATRTPPPPRQLAAATAPASDSMSAQLYTRDGRLRMAQVDPMAQTGSAVPPGMTDERAQAKARKIMERVNPVQYQETR FAKDWKSDGTLGDVAVQEMNRGMKKFNDMLNGPQTQVAKARPPPEVRFNPALAGNQAEMGSEATGDAYKSAPIAHETLPD LKGEASRRIREALAALEQRSARCDASRRTSLLSPVRTHLSDLERAEHALNNGADPVVAAQMLPRQADSAYDLARRALWYA DRQLKQCALG >Mature_330_residues MITRRKEALVPHVAAVACTGAILFFLACLLLYMPPPRQTLQHDDTLQVYFVPRPQETPPTPQQPPQEPERKPRVASAARA APPATRTPPPPRQLAAATAPASDSMSAQLYTRDGRLRMAQVDPMAQTGSAVPPGMTDERAQAKARKIMERVNPVQYQETR FAKDWKSDGTLGDVAVQEMNRGMKKFNDMLNGPQTQVAKARPPPEVRFNPALAGNQAEMGSEATGDAYKSAPIAHETLPD LKGEASRRIREALAALEQRSARCDASRRTSLLSPVRTHLSDLERAEHALNNGADPVVAAQMLPRQADSAYDLARRALWYA DRQLKQCALG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36195; Mature: 36195
Theoretical pI: Translated: 9.91; Mature: 9.91
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITRRKEALVPHVAAVACTGAILFFLACLLLYMPPPRQTLQHDDTLQVYFVPRPQETPPT CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCEEEEEECCCCCCCCC PQQPPQEPERKPRVASAARAAPPATRTPPPPRQLAAATAPASDSMSAQLYTRDGRLRMAQ CCCCCCCCHHCCHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCCCCEEEEECCCCEEEEE VDPMAQTGSAVPPGMTDERAQAKARKIMERVNPVQYQETRFAKDWKSDGTLGDVAVQEMN CCCHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHH RGMKKFNDMLNGPQTQVAKARPPPEVRFNPALAGNQAEMGSEATGDAYKSAPIAHETLPD HHHHHHHHHHCCCHHHHHCCCCCCCCEECCCCCCCHHHCCCCCCCCHHHCCCCCHHHHHH LKGEASRRIREALAALEQRSARCDASRRTSLLSPVRTHLSDLERAEHALNNGADPVVAAQ HCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH MLPRQADSAYDLARRALWYADRQLKQCALG HHHHCCCHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MITRRKEALVPHVAAVACTGAILFFLACLLLYMPPPRQTLQHDDTLQVYFVPRPQETPPT CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCEEEEEECCCCCCCCC PQQPPQEPERKPRVASAARAAPPATRTPPPPRQLAAATAPASDSMSAQLYTRDGRLRMAQ CCCCCCCCHHCCHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCCCCEEEEECCCCEEEEE VDPMAQTGSAVPPGMTDERAQAKARKIMERVNPVQYQETRFAKDWKSDGTLGDVAVQEMN CCCHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHH RGMKKFNDMLNGPQTQVAKARPPPEVRFNPALAGNQAEMGSEATGDAYKSAPIAHETLPD HHHHHHHHHHCCCHHHHHCCCCCCCCEECCCCCCCHHHCCCCCCCCHHHCCCCCHHHHHH LKGEASRRIREALAALEQRSARCDASRRTSLLSPVRTHLSDLERAEHALNNGADPVVAAQ HCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH MLPRQADSAYDLARRALWYADRQLKQCALG HHHHCCCHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA