| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is sam [H]
Identifier: 21241368
GI number: 21241368
Start: 700994
End: 701878
Strand: Direct
Name: sam [H]
Synonym: XAC0597
Alternate gene names: 21241368
Gene position: 700994-701878 (Clockwise)
Preceding gene: 21241365
Following gene: 77748539
Centisome position: 13.54
GC content: 61.92
Gene sequence:
>885_bases GTGTGGGCAATGCTGAAGGGTGTGTTGTTGGGGTTCGCCTGCTATGCGGCCTATTCGATCAGCGATGCGTTCGTGAAGCT GCTCGAAGGTACGCTGCCAGTCTATGAAGTGCTGTTTCTCGGCGCCCTGCTGATGTTGCTGGCGGTGCCGTTCCTGAAAA AACCTGACGACCAGCTACGCGAGCTGGTGATGGCCAAGCAGCCGGCACTGTGGCTGCTGCGTGCGCTCACCGGCGCCATC GGCAATCTCACCTCGGTGATCGCCTTCACCACCTTGCCGATGGCCGAAGCGTTCGCGCTGATCTTTTTGATGCCGATCTT CGTCACCGTGCTGTCGGTGATTTTCCTCAAGGAAGAAGTGCATTGGCGGCGCTGGTCGGCGGTGATCGTCGGCTTCATCG GCGTGTTGATCGTGCTGCGCCCTGGATTTCGCCATCTCACCCACGGGCATGTGGCGGCAATCGTGTGCGGCCTGGTCGGC GCCATCTCGGTGATCGCCTTGCGCATGGCCGGCCATAGCGAGAAGCGATTGACCTTGTACGGCGCTGGCGTGATCGGCCC GTTGGTGATGGGCGGGATCATGATGTTGCCGAGCTTCGTCTGGCCCACGCTGTCCCAATGGGGCTTGTTGGCCGGCTACG GCTTGCTCGCCGGGCTGGCCGCCATCTGCATGATGTACGCCACGCGCATGGCCCCGGTCAGCGTGGTCGCGCCAACCCAA TACAGCCAGATGCTATGGGCCATCGCCTTCGGCTACCTGCTGTTTCATGATCATCTGGACTGGCCGATGGCCGTGGGCAT CGCGCTGATCCTGGGCGCCGGTTTGTTCACCCTGGTGCGCGAGGAACAGGTGTCGCGTTGGTGGCGGCGAACCAAGATTG TTTGA
Upstream 100 bases:
>100_bases CACCGAGGTCGACGGCCTGCGCCGTTTCGCTGACACACGCCGCACCGCATACTGCAGGCAATCCGTATCGACACCTGGTC CGATCGGCGTCAACCGTGGA
Downstream 100 bases:
>100_bases GTGCCGGGAATTGGGAGTGGGGAATGGCAAAAGCAGAAGTGCGCTAAACGCGATCGGAGTAGCGCTTTTGCCGTTCCCGA TTCCCGATTCACTCAGTGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 294; Mature: 294
Protein sequence:
>294_residues MWAMLKGVLLGFACYAAYSISDAFVKLLEGTLPVYEVLFLGALLMLLAVPFLKKPDDQLRELVMAKQPALWLLRALTGAI GNLTSVIAFTTLPMAEAFALIFLMPIFVTVLSVIFLKEEVHWRRWSAVIVGFIGVLIVLRPGFRHLTHGHVAAIVCGLVG AISVIALRMAGHSEKRLTLYGAGVIGPLVMGGIMMLPSFVWPTLSQWGLLAGYGLLAGLAAICMMYATRMAPVSVVAPTQ YSQMLWAIAFGYLLFHDHLDWPMAVGIALILGAGLFTLVREEQVSRWWRRTKIV
Sequences:
>Translated_294_residues MWAMLKGVLLGFACYAAYSISDAFVKLLEGTLPVYEVLFLGALLMLLAVPFLKKPDDQLRELVMAKQPALWLLRALTGAI GNLTSVIAFTTLPMAEAFALIFLMPIFVTVLSVIFLKEEVHWRRWSAVIVGFIGVLIVLRPGFRHLTHGHVAAIVCGLVG AISVIALRMAGHSEKRLTLYGAGVIGPLVMGGIMMLPSFVWPTLSQWGLLAGYGLLAGLAAICMMYATRMAPVSVVAPTQ YSQMLWAIAFGYLLFHDHLDWPMAVGIALILGAGLFTLVREEQVSRWWRRTKIV >Mature_294_residues MWAMLKGVLLGFACYAAYSISDAFVKLLEGTLPVYEVLFLGALLMLLAVPFLKKPDDQLRELVMAKQPALWLLRALTGAI GNLTSVIAFTTLPMAEAFALIFLMPIFVTVLSVIFLKEEVHWRRWSAVIVGFIGVLIVLRPGFRHLTHGHVAAIVCGLVG AISVIALRMAGHSEKRLTLYGAGVIGPLVMGGIMMLPSFVWPTLSQWGLLAGYGLLAGLAAICMMYATRMAPVSVVAPTQ YSQMLWAIAFGYLLFHDHLDWPMAVGIALILGAGLFTLVREEQVSRWWRRTKIV
Specific function: Transports S-adenosylmethionine [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the drug/metabolite transporter (DMT) superfamily. 10 TMS drug/metabolite exporter (TC 2.A.7.3) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 32286; Mature: 32286
Theoretical pI: Translated: 9.76; Mature: 9.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWAMLKGVLLGFACYAAYSISDAFVKLLEGTLPVYEVLFLGALLMLLAVPFLKKPDDQLR CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHH ELVMAKQPALWLLRALTGAIGNLTSVIAFTTLPMAEAFALIFLMPIFVTVLSVIFLKEEV HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HWRRWSAVIVGFIGVLIVLRPGFRHLTHGHVAAIVCGLVGAISVIALRMAGHSEKRLTLY HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE GAGVIGPLVMGGIMMLPSFVWPTLSQWGLLAGYGLLAGLAAICMMYATRMAPVSVVAPTQ ECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCH YSQMLWAIAFGYLLFHDHLDWPMAVGIALILGAGLFTLVREEQVSRWWRRTKIV HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MWAMLKGVLLGFACYAAYSISDAFVKLLEGTLPVYEVLFLGALLMLLAVPFLKKPDDQLR CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHH ELVMAKQPALWLLRALTGAIGNLTSVIAFTTLPMAEAFALIFLMPIFVTVLSVIFLKEEV HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HWRRWSAVIVGFIGVLIVLRPGFRHLTHGHVAAIVCGLVGAISVIALRMAGHSEKRLTLY HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE GAGVIGPLVMGGIMMLPSFVWPTLSQWGLLAGYGLLAGLAAICMMYATRMAPVSVVAPTQ ECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCH YSQMLWAIAFGYLLFHDHLDWPMAVGIALILGAGLFTLVREEQVSRWWRRTKIV HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA