| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21241355
Identifier: 21241355
GI number: 21241355
Start: 687126
End: 687917
Strand: Direct
Name: 21241355
Synonym: XAC0584
Alternate gene names: NA
Gene position: 687126-687917 (Clockwise)
Preceding gene: 21241353
Following gene: 21241356
Centisome position: 13.28
GC content: 60.86
Gene sequence:
>792_bases ATGAAGACTTCCATGCTGGCCATCGGGCTGGCCGGCTTGCTGTGTGCGTGCACGGTTGTGTCGCCCGATCCGGGGCAGCA GGCCGTGTTGGTGGATAAGCCCCTGTTCTTCGGCAAGGGCGGCATCCGCCTGGACGATGTGCGCGATCCCGGCCGCACTT ACACGTGGCTGACCACGTCGGCCACCTATGTGGATGTGACGCCACAGACCGTGCAGGTGGCGTTCGACGATTTCTCCTCC AGCGACAACATCCTGTTGGACTTCTCCACCCAGATCCAATACAGGATTACTGCGCCGGCGCTGTTGTTGTCCAGGTTCGG GCAGGATTGGTTCAAGAACAATGTTGCCAGTCAGTACGCGTCCATCGTGCGCGACCAGGTCAAGCGCTACGACATGACCA AGATGATGAGCGACCCCGACACCGCCAGGAAGATCGACGATTCGGTGACACAAAACGTCAGTGCCTTGGTCAAGGAGCAA GGCCTGCCGATCCAGATCCAGAACATCACCCTGGGCCGCGCACGCCCGAATCCGGACGTGTTGCAACAGATGAATCTGAC TGCCGCGCAGCAACAGCGGGTCAAGACCCTGGTGGAGGCGACCACCGCAGAACGGCAGCGCGAGCAGGAGCAGGAGGCCA AGGCCGACGCAGATAACGCGTATCGCAACCGCATGGGCCTGACGCCGGAGCAATACCTAGCCAGCCAGATCGCCGAGCTC AATGCCGAGGCCTGCAAGAAAGCGCAGGCATGCTACATGGTGCCGTCGGGAACTTCGGTGATTGCAAGATAG
Upstream 100 bases:
>100_bases GAAGTCCCCGAGCTGCGCGGAGGATGCGACTGGCCGGATGTTTGGGTAATCTCCCGCCACACCGGCGCGGATTGGCGCCC GGGCATTCAAGGGGACATCG
Downstream 100 bases:
>100_bases GTCCGCCGTTGCCTGCCGCCAGGCGCAAGCACTGGGTGATGAATAGTCACGCGCGCGCATACCATCGCGCTGCTCACGTC GCCTGCAACATCGGTGGGCT
Product: hypothetical protein
Products: NA
Alternate protein names: Secreted Protein
Number of amino acids: Translated: 263; Mature: 263
Protein sequence:
>263_residues MKTSMLAIGLAGLLCACTVVSPDPGQQAVLVDKPLFFGKGGIRLDDVRDPGRTYTWLTTSATYVDVTPQTVQVAFDDFSS SDNILLDFSTQIQYRITAPALLLSRFGQDWFKNNVASQYASIVRDQVKRYDMTKMMSDPDTARKIDDSVTQNVSALVKEQ GLPIQIQNITLGRARPNPDVLQQMNLTAAQQQRVKTLVEATTAERQREQEQEAKADADNAYRNRMGLTPEQYLASQIAEL NAEACKKAQACYMVPSGTSVIAR
Sequences:
>Translated_263_residues MKTSMLAIGLAGLLCACTVVSPDPGQQAVLVDKPLFFGKGGIRLDDVRDPGRTYTWLTTSATYVDVTPQTVQVAFDDFSS SDNILLDFSTQIQYRITAPALLLSRFGQDWFKNNVASQYASIVRDQVKRYDMTKMMSDPDTARKIDDSVTQNVSALVKEQ GLPIQIQNITLGRARPNPDVLQQMNLTAAQQQRVKTLVEATTAERQREQEQEAKADADNAYRNRMGLTPEQYLASQIAEL NAEACKKAQACYMVPSGTSVIAR >Mature_263_residues MKTSMLAIGLAGLLCACTVVSPDPGQQAVLVDKPLFFGKGGIRLDDVRDPGRTYTWLTTSATYVDVTPQTVQVAFDDFSS SDNILLDFSTQIQYRITAPALLLSRFGQDWFKNNVASQYASIVRDQVKRYDMTKMMSDPDTARKIDDSVTQNVSALVKEQ GLPIQIQNITLGRARPNPDVLQQMNLTAAQQQRVKTLVEATTAERQREQEQEAKADADNAYRNRMGLTPEQYLASQIAEL NAEACKKAQACYMVPSGTSVIAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29092; Mature: 29092
Theoretical pI: Translated: 5.42; Mature: 5.42
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTSMLAIGLAGLLCACTVVSPDPGQQAVLVDKPLFFGKGGIRLDDVRDPGRTYTWLTTS CCCHHHHHHHHHHHHHHEEECCCCCCEEEEEECCEEECCCCCEECCCCCCCCEEEEEEEC ATYVDVTPQTVQVAFDDFSSSDNILLDFSTQIQYRITAPALLLSRFGQDWFKNNVASQYA CEEEEECCCEEEEEECCCCCCCCEEEEEECEEEEEECHHHHHHHHHCHHHHHHHHHHHHH SIVRDQVKRYDMTKMMSDPDTARKIDDSVTQNVSALVKEQGLPIQIQNITLGRARPNPDV HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCHHH LQQMNLTAAQQQRVKTLVEATTAERQREQEQEAKADADNAYRNRMGLTPEQYLASQIAEL HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHC NAEACKKAQACYMVPSGTSVIAR CHHHHHCCCEEEECCCCCHHHCC >Mature Secondary Structure MKTSMLAIGLAGLLCACTVVSPDPGQQAVLVDKPLFFGKGGIRLDDVRDPGRTYTWLTTS CCCHHHHHHHHHHHHHHEEECCCCCCEEEEEECCEEECCCCCEECCCCCCCCEEEEEEEC ATYVDVTPQTVQVAFDDFSSSDNILLDFSTQIQYRITAPALLLSRFGQDWFKNNVASQYA CEEEEECCCEEEEEECCCCCCCCEEEEEECEEEEEECHHHHHHHHHCHHHHHHHHHHHHH SIVRDQVKRYDMTKMMSDPDTARKIDDSVTQNVSALVKEQGLPIQIQNITLGRARPNPDV HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCHHH LQQMNLTAAQQQRVKTLVEATTAERQREQEQEAKADADNAYRNRMGLTPEQYLASQIAEL HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHC NAEACKKAQACYMVPSGTSVIAR CHHHHHCCCEEEECCCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA