| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21241299
Identifier: 21241299
GI number: 21241299
Start: 617904
End: 618833
Strand: Direct
Name: 21241299
Synonym: XAC0528
Alternate gene names: NA
Gene position: 617904-618833 (Clockwise)
Preceding gene: 21241298
Following gene: 21241300
Centisome position: 11.94
GC content: 70.0
Gene sequence:
>930_bases ATGCCGCTTGCTCGTGCCCGCCATCTCTGGCTGCTGCTCGCTCCCGCTGCGCTTGCGGCGGCCGCGTGGTGGCATGTGCG CGCGCAACCGGCCGGGCGTGATGCCGACCGCGCAGTGCCGGTTGCTGCACAGGTGATCCCGGTCAGCGCTGCCCCACCGC AGCCGCACACGGCGACCGAGCACGGTGCTGCGTTGCAGCTGCCCCATCGCGATGCAGTGGAAGCGCAACCGGATCTGTAT CGCTACGCGCAGCAATTGCAGCAGCAGGTGCGTGCCGGCGATGCCCAGGCCGGGTGGCGGTTGAGCCGTGTCTACGATTA CTGCGCGCCCTATGCGGCCAGTCCGTCCGGCTATGCCGCCGACAGCGCATGGATCGCCGCGCAACACACGCCGGGAGTGG CAGCGATGCATGCCGCACGCGAGCGCCTGGCGCAGCGCTGCGCCGGTTTCGCCCCCACCGACGGGCTGAGTCCGCGCATG GTTGCCCAGCAACGCCTGGTCGCGGCGCGCGCCGGCAGCCTGGCCGCCGAGGCCGCCATGCTGGCGTTGGGCGAACCGTT GCACGCATCGCCCGGCTACAAGCGCGCGCTGGTGCAACGCGTGCTGGCCTCGCGCGATCCCGAGGCCTATCTGGCCCTGG CCCCGGCGATGGGCGCGCGGGCCAGCGGCGATGACAGCCTCCAAGGCTATGTGGCCGGCGATCAGTTCGCCGAGCTGGCC TGGCAGGTGGCTGCATGCCGGCTGGGGCTCGATTGCAGTGCCGGCAGCACCTTGGTCACCAGTTATTGCGCCAACGCGGG CATCTGCTCGCGCGACAGCGCACAGGATTTCGTGTCGTTCGTATTCGATGCCGCGGTGCCGCGGCAGGGAGCAGACAGGG TGGATGAGATGGTCGATACATTGGTCTCCGATCCGGGAGCGCAGTCATGA
Upstream 100 bases:
>100_bases TCCACTGGCAGCGTCTGCTTGGCGGCAGCTGTGCGCGTGGGTGGGTGCTAGACTCCGCGCCGTCGCTGCGGGTGGTTCCG CAGCAGGGTCGCCGCCATCC
Downstream 100 bases:
>100_bases ATTACCGTCGGTTGGCGCACGGCGCCAAGTTCTGGTTATGGGTGGCGTTGTTCGTGGCGTATTCGGCGGCGGCGGTCAGC ATCGTGATGATCGACACCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 309; Mature: 308
Protein sequence:
>309_residues MPLARARHLWLLLAPAALAAAAWWHVRAQPAGRDADRAVPVAAQVIPVSAAPPQPHTATEHGAALQLPHRDAVEAQPDLY RYAQQLQQQVRAGDAQAGWRLSRVYDYCAPYAASPSGYAADSAWIAAQHTPGVAAMHAARERLAQRCAGFAPTDGLSPRM VAQQRLVAARAGSLAAEAAMLALGEPLHASPGYKRALVQRVLASRDPEAYLALAPAMGARASGDDSLQGYVAGDQFAELA WQVAACRLGLDCSAGSTLVTSYCANAGICSRDSAQDFVSFVFDAAVPRQGADRVDEMVDTLVSDPGAQS
Sequences:
>Translated_309_residues MPLARARHLWLLLAPAALAAAAWWHVRAQPAGRDADRAVPVAAQVIPVSAAPPQPHTATEHGAALQLPHRDAVEAQPDLY RYAQQLQQQVRAGDAQAGWRLSRVYDYCAPYAASPSGYAADSAWIAAQHTPGVAAMHAARERLAQRCAGFAPTDGLSPRM VAQQRLVAARAGSLAAEAAMLALGEPLHASPGYKRALVQRVLASRDPEAYLALAPAMGARASGDDSLQGYVAGDQFAELA WQVAACRLGLDCSAGSTLVTSYCANAGICSRDSAQDFVSFVFDAAVPRQGADRVDEMVDTLVSDPGAQS >Mature_308_residues PLARARHLWLLLAPAALAAAAWWHVRAQPAGRDADRAVPVAAQVIPVSAAPPQPHTATEHGAALQLPHRDAVEAQPDLYR YAQQLQQQVRAGDAQAGWRLSRVYDYCAPYAASPSGYAADSAWIAAQHTPGVAAMHAARERLAQRCAGFAPTDGLSPRMV AQQRLVAARAGSLAAEAAMLALGEPLHASPGYKRALVQRVLASRDPEAYLALAPAMGARASGDDSLQGYVAGDQFAELAW QVAACRLGLDCSAGSTLVTSYCANAGICSRDSAQDFVSFVFDAAVPRQGADRVDEMVDTLVSDPGAQS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32500; Mature: 32369
Theoretical pI: Translated: 6.71; Mature: 6.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLARARHLWLLLAPAALAAAAWWHVRAQPAGRDADRAVPVAAQVIPVSAAPPQPHTATE CCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCHHHEEEECCCCCCCCCCCCC HGAALQLPHRDAVEAQPDLYRYAQQLQQQVRAGDAQAGWRLSRVYDYCAPYAASPSGYAA CCCEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCC DSAWIAAQHTPGVAAMHAARERLAQRCAGFAPTDGLSPRMVAQQRLVAARAGSLAAEAAM CCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH LALGEPLHASPGYKRALVQRVLASRDPEAYLALAPAMGARASGDDSLQGYVAGDQFAELA HHHCCCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCEEEECHHHHHHHH WQVAACRLGLDCSAGSTLVTSYCANAGICSRDSAQDFVSFVFDAAVPRQGADRVDEMVDT HHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHH LVSDPGAQS HHCCCCCCC >Mature Secondary Structure PLARARHLWLLLAPAALAAAAWWHVRAQPAGRDADRAVPVAAQVIPVSAAPPQPHTATE CCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCHHHEEEECCCCCCCCCCCCC HGAALQLPHRDAVEAQPDLYRYAQQLQQQVRAGDAQAGWRLSRVYDYCAPYAASPSGYAA CCCEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCC DSAWIAAQHTPGVAAMHAARERLAQRCAGFAPTDGLSPRMVAQQRLVAARAGSLAAEAAM CCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH LALGEPLHASPGYKRALVQRVLASRDPEAYLALAPAMGARASGDDSLQGYVAGDQFAELA HHHCCCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCEEEECHHHHHHHH WQVAACRLGLDCSAGSTLVTSYCANAGICSRDSAQDFVSFVFDAAVPRQGADRVDEMVDT HHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHH LVSDPGAQS HHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA