| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is cdsA [H]
Identifier: 21241292
GI number: 21241292
Start: 611816
End: 612748
Strand: Direct
Name: cdsA [H]
Synonym: XAC0521
Alternate gene names: 21241292
Gene position: 611816-612748 (Clockwise)
Preceding gene: 21241291
Following gene: 21241296
Centisome position: 11.82
GC content: 63.13
Gene sequence:
>933_bases ATGCATCAGCAGACGCTGTGGCTGTTCAGCGGTATCGCGCTGGTGCTCATCATCGCCACGCTGATTTCCGAAACCCTGCG TTGGCGCGCACGCGAACGCCCCAGCGCAGTGCTGGACAACCTGGTCGCCCGCATCCGTGCGTGGTGGGTGATGGCCGCGG TGGTCGGCCTTGCGTTCGTGTTTGGCCGCGCCGGCGTCATCGGCTTGTTCGCGTTGGTGTCGTTGTTTGCGCTGCGCGAG TTCATCACCTTGACCCCGACCCGGCGCGGCGATTACTACGCGTTACTGGCCGCGTTCTACGTCGTGTTACCGTGGCAATA CGGCCTGGTGTGGACCGGCTGGTACGGCCTGTACACCTTGCTGATTCCGGTCTACGCGTTCCTGGTATTGCCGATCCTGG CCACCATCGGCGGCGACACCACGCGTTATCTGGAACGCACCGCCAAAGTGCAGTGGGGCCTGATGATCTGCGTGTTCTGC ATTTCGCATGTGCCGGCGCTGTTGAACCTGGACATTCCCGGCTATGCGGGGCGCAATCTGCTGTTGATCGCCTTCCTGGT GATCGTGGTGCAGTCCTCGGACGTACTGCAGTACGTGTGGGGCAAACTGGCCGGCCGCCATCTGATCGCGCCGAAATTGT CGCCGTCCAAAACGGTGGAAGGATTCATCGGCGGCGTGGTGTCGGCCAGCCTGCTCGGGATGGCGCTGTGGTGGATCACC CCGTTCGCGCCGTGGCATGCCTTCGGCCTGGCATTGGTGGCCAACCTGATGGGATTTTTCGGCGGGCTGGTGATGTCGGC GATCAAGCGCGATCGCGGCATCAAGGACTGGGGCCATATGATCGAAGGCCACGGCGGTGTGCTCGACCGCCTGGATTCGG TGTGCTTCGCCGCGCCGGTCTTCTTCCACCTGATTCGCTATGGCTGGGCGTGA
Upstream 100 bases:
>100_bases TGACGCGTGCACGTGCGGCGTTGCTGGCGTTGTCGCCGGATCACTTGGAGGCGCGCGCATGAGCCTGTCTGCGTACAGCG GCCAGCTGCAGCAGTCTTCG
Downstream 100 bases:
>100_bases CCGCTTGTCACATCGCTTGTCATGAAATCGCAACACGTGCATCGCGTGCCGTTGGCGATCTGCAGCACCGGATCCGCCCA GCGCGCGTCGGTCAACCGCC
Product: phosphatidate cytidiltransferase
Products: diphosphate; CDPdiacylglycerol
Alternate protein names: NA
Number of amino acids: Translated: 310; Mature: 310
Protein sequence:
>310_residues MHQQTLWLFSGIALVLIIATLISETLRWRARERPSAVLDNLVARIRAWWVMAAVVGLAFVFGRAGVIGLFALVSLFALRE FITLTPTRRGDYYALLAAFYVVLPWQYGLVWTGWYGLYTLLIPVYAFLVLPILATIGGDTTRYLERTAKVQWGLMICVFC ISHVPALLNLDIPGYAGRNLLLIAFLVIVVQSSDVLQYVWGKLAGRHLIAPKLSPSKTVEGFIGGVVSASLLGMALWWIT PFAPWHAFGLALVANLMGFFGGLVMSAIKRDRGIKDWGHMIEGHGGVLDRLDSVCFAAPVFFHLIRYGWA
Sequences:
>Translated_310_residues MHQQTLWLFSGIALVLIIATLISETLRWRARERPSAVLDNLVARIRAWWVMAAVVGLAFVFGRAGVIGLFALVSLFALRE FITLTPTRRGDYYALLAAFYVVLPWQYGLVWTGWYGLYTLLIPVYAFLVLPILATIGGDTTRYLERTAKVQWGLMICVFC ISHVPALLNLDIPGYAGRNLLLIAFLVIVVQSSDVLQYVWGKLAGRHLIAPKLSPSKTVEGFIGGVVSASLLGMALWWIT PFAPWHAFGLALVANLMGFFGGLVMSAIKRDRGIKDWGHMIEGHGGVLDRLDSVCFAAPVFFHLIRYGWA >Mature_310_residues MHQQTLWLFSGIALVLIIATLISETLRWRARERPSAVLDNLVARIRAWWVMAAVVGLAFVFGRAGVIGLFALVSLFALRE FITLTPTRRGDYYALLAAFYVVLPWQYGLVWTGWYGLYTLLIPVYAFLVLPILATIGGDTTRYLERTAKVQWGLMICVFC ISHVPALLNLDIPGYAGRNLLLIAFLVIVVQSSDVLQYVWGKLAGRHLIAPKLSPSKTVEGFIGGVVSASLLGMALWWIT PFAPWHAFGLALVANLMGFFGGLVMSAIKRDRGIKDWGHMIEGHGGVLDRLDSVCFAAPVFFHLIRYGWA
Specific function: Unknown
COG id: COG4589
COG function: function code R; Predicted CDP-diglyceride synthetase/phosphatidate cytidylyltransferase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CDS family [H]
Homologues:
Organism=Escherichia coli, GI1787677, Length=296, Percent_Identity=38.8513513513513, Blast_Score=176, Evalue=2e-45, Organism=Escherichia coli, GI87081696, Length=135, Percent_Identity=43.7037037037037, Blast_Score=102, Evalue=3e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000374 [H]
Pfam domain/function: PF01148 CTP_transf_1 [H]
EC number: 2.7.7.41
Molecular weight: Translated: 34425; Mature: 34425
Theoretical pI: Translated: 9.92; Mature: 9.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHQQTLWLFSGIALVLIIATLISETLRWRARERPSAVLDNLVARIRAWWVMAAVVGLAFV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH FGRAGVIGLFALVSLFALREFITLTPTRRGDYYALLAAFYVVLPWQYGLVWTGWYGLYTL HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH LIPVYAFLVLPILATIGGDTTRYLERTAKVQWGLMICVFCISHVPALLNLDIPGYAGRNL HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCHH LLIAFLVIVVQSSDVLQYVWGKLAGRHLIAPKLSPSKTVEGFIGGVVSASLLGMALWWIT HHHHHHHHHHCCCHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC PFAPWHAFGLALVANLMGFFGGLVMSAIKRDRGIKDWGHMIEGHGGVLDRLDSVCFAAPV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHHHHHH FFHLIRYGWA HHHHHHHCCC >Mature Secondary Structure MHQQTLWLFSGIALVLIIATLISETLRWRARERPSAVLDNLVARIRAWWVMAAVVGLAFV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH FGRAGVIGLFALVSLFALREFITLTPTRRGDYYALLAAFYVVLPWQYGLVWTGWYGLYTL HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH LIPVYAFLVLPILATIGGDTTRYLERTAKVQWGLMICVFCISHVPALLNLDIPGYAGRNL HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCHH LLIAFLVIVVQSSDVLQYVWGKLAGRHLIAPKLSPSKTVEGFIGGVVSASLLGMALWWIT HHHHHHHHHHCCCHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC PFAPWHAFGLALVANLMGFFGGLVMSAIKRDRGIKDWGHMIEGHGGVLDRLDSVCFAAPV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHHHHHH FFHLIRYGWA HHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: CTP; phosphatidate
Specific reaction: CTP + phosphatidate = diphosphate + CDP-diacylglycerol
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9278503; 9097039 [H]