| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21241277
Identifier: 21241277
GI number: 21241277
Start: 593001
End: 593336
Strand: Reverse
Name: 21241277
Synonym: XAC0506
Alternate gene names: NA
Gene position: 593336-593001 (Counterclockwise)
Preceding gene: 21241278
Following gene: 21241276
Centisome position: 11.46
GC content: 64.88
Gene sequence:
>336_bases ATGCCACCGCCGATCCATCCCTCGTCCAGCGCCGCGCCCGGCCCGGTGCCGAATCACCTGATCTGGGCGATCGTTTCCAC CGTGCTGGGCTTTTGCCTGTGCTGCCCGGCCCTGATCTCCGGCATCGTGGCGATCGTGTTTTCCAGCAAGGTCAACGGCC TGCTCAACCAGGGCGACATCGACGGCGCACGCCGCGCCTCCAACACCGCCAAGACCTGGTGCATCGTGACCAGCGTGCTG GCCGCGATCGGCCTGCTGATCAACATCGGCATGGTGGCCACCGGCGGCATGCAGGGCTACATGGACTACATGCAGCAGTT GCAGCACATGCAGTAA
Upstream 100 bases:
>100_bases ACACGGGCGCATCACCGCCGCGCATGGCGCCCGATAATCGACCCCACTCACCCATCAGTTCGCTGTTGTTTACCACCCAA GGAGCTTCACCATGAGTGCC
Downstream 100 bases:
>100_bases TGGAACTGCGTCCACGCCATTGGCTTGGACTGGGGGCGGCCACCAGCGTGGCCGCCCTTGGCGTGTCGTTGCTGTATCGC TTCGATCCGAATGCCAGCAA
Product: transmembrane protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 111; Mature: 110
Protein sequence:
>111_residues MPPPIHPSSSAAPGPVPNHLIWAIVSTVLGFCLCCPALISGIVAIVFSSKVNGLLNQGDIDGARRASNTAKTWCIVTSVL AAIGLLINIGMVATGGMQGYMDYMQQLQHMQ
Sequences:
>Translated_111_residues MPPPIHPSSSAAPGPVPNHLIWAIVSTVLGFCLCCPALISGIVAIVFSSKVNGLLNQGDIDGARRASNTAKTWCIVTSVL AAIGLLINIGMVATGGMQGYMDYMQQLQHMQ >Mature_110_residues PPPIHPSSSAAPGPVPNHLIWAIVSTVLGFCLCCPALISGIVAIVFSSKVNGLLNQGDIDGARRASNTAKTWCIVTSVLA AIGLLINIGMVATGGMQGYMDYMQQLQHMQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11620; Mature: 11489
Theoretical pI: Translated: 7.96; Mature: 7.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 5.4 %Met (Translated Protein) 9.0 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 8.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPPIHPSSSAAPGPVPNHLIWAIVSTVLGFCLCCPALISGIVAIVFSSKVNGLLNQGDI CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC DGARRASNTAKTWCIVTSVLAAIGLLINIGMVATGGMQGYMDYMQQLQHMQ CHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCC >Mature Secondary Structure PPPIHPSSSAAPGPVPNHLIWAIVSTVLGFCLCCPALISGIVAIVFSSKVNGLLNQGDI CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC DGARRASNTAKTWCIVTSVLAAIGLLINIGMVATGGMQGYMDYMQQLQHMQ CHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA