| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is ampE
Identifier: 21241275
GI number: 21241275
Start: 591621
End: 592511
Strand: Direct
Name: ampE
Synonym: XAC0504
Alternate gene names: NA
Gene position: 591621-592511 (Clockwise)
Preceding gene: 21241274
Following gene: 21241280
Centisome position: 11.43
GC content: 68.35
Gene sequence:
>891_bases ATGTTCACCACCCTGGTTGCCGTCGTCGTCGCGCTCACGCTGGGCCATCTGGTACCGGCGCAGGTGGCCAGGCTGCGCAA TTTCGCCTGGTTCGGCCAATGGCTGCGCCGGTTGGACAGTTACGCGGCCGGGCGCGGTGCGTGGCAAGGGCGCTATGGCG TACTGCTGGCCGTGCTACCGGCGCTGCTGGTGTTGCTGGTGCAGTGGCTGCTGGACGATGTCTGGCACGGTTTTCTGGGC TTGCTGTTCGGCGTGGCGGTGCTGGCCTGGACCTGGGGTCCGCGCGATCTGGATCGCGATGTGGAAGCGGTCATCGACGC CGACGAGCCGCGCACGCGGCGCGAAGCGGTTTCGCACCTGCAGGCCGCCGGCGGCAGCGTGCACGAAGACGCGCCGTCGC TGGTGGAAGCGGTGGTGGTCAACGGCCTGCGACGTTGGTTTGCGGTGCTGTGGTGGTTTCTGCTGCTGGGGCCGTTCGGC GCGGTGCTGTATCGGCTCACTGCCCTGGCGGTGGAAAGCCCGCTGGCCGTGTTGCTGCCGCCCCGCAATCTGGCTGGCGC GCGCTGGCTGCTGGCGGTGCTGGAATGGCCGGTGGCGCAGTTGATGACGATGTCGATGGCGCTGGTGGGTAACTTCGACA CCGTGTTCCGCGCCTGGCGGCAGGCGCATGGCAACCGCTGGTCGCTGGAACCGCATTTTCTCGGCGCCGTTGCACGTGCC AGCGTCAGCGCCGAGCTGCGCGAGGAAGCGCACGACTACACCGATTCGGGCCTGGTGCCGGTCTGGCGCCGCCTGCCGGA AGTACGCGACGCGATGAGCCTGGTCTGGCGCGTGCTGCTGCTATGGTTGGTGGTGCTGGCGTTGTTGGTGATTGCGGGCT GGGTGCGGTAG
Upstream 100 bases:
>100_bases GAGCACTGGCATCGTGCGCATGGCTGAGCCTGGCCGGCTTTTGCGGTGTTGCAGCGGCGCTCGCGTCCGCTCGGCTAGAC TCGGCTGAGGAGGCCTGCCC
Downstream 100 bases:
>100_bases CGCCGCGCGTGATGTCGGGCGAGAAGATGTGTAGCGCCGGGCCCTATGGAAACGTCGGCCCCTCGCGATTGTTCGCGGTC TAACCCGGCGCCAGCAAGGT
Product: transmembrane protein
Products: NA
Alternate protein names: Signaling Modulator Of AmpD AmpE
Number of amino acids: Translated: 296; Mature: 296
Protein sequence:
>296_residues MFTTLVAVVVALTLGHLVPAQVARLRNFAWFGQWLRRLDSYAAGRGAWQGRYGVLLAVLPALLVLLVQWLLDDVWHGFLG LLFGVAVLAWTWGPRDLDRDVEAVIDADEPRTRREAVSHLQAAGGSVHEDAPSLVEAVVVNGLRRWFAVLWWFLLLGPFG AVLYRLTALAVESPLAVLLPPRNLAGARWLLAVLEWPVAQLMTMSMALVGNFDTVFRAWRQAHGNRWSLEPHFLGAVARA SVSAELREEAHDYTDSGLVPVWRRLPEVRDAMSLVWRVLLLWLVVLALLVIAGWVR
Sequences:
>Translated_296_residues MFTTLVAVVVALTLGHLVPAQVARLRNFAWFGQWLRRLDSYAAGRGAWQGRYGVLLAVLPALLVLLVQWLLDDVWHGFLG LLFGVAVLAWTWGPRDLDRDVEAVIDADEPRTRREAVSHLQAAGGSVHEDAPSLVEAVVVNGLRRWFAVLWWFLLLGPFG AVLYRLTALAVESPLAVLLPPRNLAGARWLLAVLEWPVAQLMTMSMALVGNFDTVFRAWRQAHGNRWSLEPHFLGAVARA SVSAELREEAHDYTDSGLVPVWRRLPEVRDAMSLVWRVLLLWLVVLALLVIAGWVR >Mature_296_residues MFTTLVAVVVALTLGHLVPAQVARLRNFAWFGQWLRRLDSYAAGRGAWQGRYGVLLAVLPALLVLLVQWLLDDVWHGFLG LLFGVAVLAWTWGPRDLDRDVEAVIDADEPRTRREAVSHLQAAGGSVHEDAPSLVEAVVVNGLRRWFAVLWWFLLLGPFG AVLYRLTALAVESPLAVLLPPRNLAGARWLLAVLEWPVAQLMTMSMALVGNFDTVFRAWRQAHGNRWSLEPHFLGAVARA SVSAELREEAHDYTDSGLVPVWRRLPEVRDAMSLVWRVLLLWLVVLALLVIAGWVR
Specific function: Unknown
COG id: COG3725
COG function: function code V; Membrane protein required for beta-lactamase induction
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33121; Mature: 33121
Theoretical pI: Translated: 9.01; Mature: 9.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFTTLVAVVVALTLGHLVPAQVARLRNFAWFGQWLRRLDSYAAGRGAWQGRYGVLLAVLP CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH ALLVLLVQWLLDDVWHGFLGLLFGVAVLAWTWGPRDLDRDVEAVIDADEPRTRREAVSHL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHH QAAGGSVHEDAPSLVEAVVVNGLRRWFAVLWWFLLLGPFGAVLYRLTALAVESPLAVLLP HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEC PRNLAGARWLLAVLEWPVAQLMTMSMALVGNFDTVFRAWRQAHGNRWSLEPHFLGAVARA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHH SVSAELREEAHDYTDSGLVPVWRRLPEVRDAMSLVWRVLLLWLVVLALLVIAGWVR HHHHHHHHHHHCCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MFTTLVAVVVALTLGHLVPAQVARLRNFAWFGQWLRRLDSYAAGRGAWQGRYGVLLAVLP CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH ALLVLLVQWLLDDVWHGFLGLLFGVAVLAWTWGPRDLDRDVEAVIDADEPRTRREAVSHL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHH QAAGGSVHEDAPSLVEAVVVNGLRRWFAVLWWFLLLGPFGAVLYRLTALAVESPLAVLLP HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEC PRNLAGARWLLAVLEWPVAQLMTMSMALVGNFDTVFRAWRQAHGNRWSLEPHFLGAVARA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHH SVSAELREEAHDYTDSGLVPVWRRLPEVRDAMSLVWRVLLLWLVVLALLVIAGWVR HHHHHHHHHHHCCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA