| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21241242
Identifier: 21241242
GI number: 21241242
Start: 559744
End: 560478
Strand: Direct
Name: 21241242
Synonym: XAC0469
Alternate gene names: NA
Gene position: 559744-560478 (Clockwise)
Preceding gene: 21241236
Following gene: 21241244
Centisome position: 10.82
GC content: 58.91
Gene sequence:
>735_bases GTGACCGCAGTGACGGTGGCCGACTGCTCAAACGGTTCCAAGGCCCGTGATTGTCGTCAATACAGGCCGGGTACCTCATC TCGACCCATCGCAGAAATCGTCATTCGGCGATGTATGGGCTGCCTGGAAATCGCCCGTTGGCGCGAGCAACTAAATTCCG TTCGAAAATACATCGAGTGCGTCCGCACTCACCCATCCTTGCGCGCAATTGCCGACGTATTGTCCTGGTGCTGCTGGGTG GCAGCTCTCGCCACTTGCACGCTTGATCTGCTTGATCTGCCTGTCGCCATAAGTTTTGCACAATGCGTTGTTCTTGCACC TTGCGATGGTGCTCGCTGGAATTGCGGCGACGTAGTAACACCGCGGGTCTTGTCCGGCGCGGCCGATCGCCTGGGCTACG CCGGCGAAAAATCCCTCATTGCCGCAATCGGGCGAAAACTCCACATCGTAGAAATCACCACTGTCGACAGTGCCAGCTGT GATCCTTTTGCAGTCGTTGCATCCGTGCAGGTGACGCCAGTGGCCTGTATCAGCGCGGCAAGTCTGGCGTTGACCTGCAA TGCTGCGGACGCGTTGTTTTTCGCAGGTGCTAGCGGTGCTGATGTGGGAACGGCGTGGGGTGCAGATTCGCCGGCAGTGC AGGCGTTCAGCGCGAGTGCTAGACCGGGAATGATTGCGCTGCGCAAGGCAGGCGACGCGCGGAACAAGTGGCCTAACTGG GTCATTGCGACCTGA
Upstream 100 bases:
>100_bases CGCCGGATGGTATCTGCGCGCTGCGTGCAAATGCGTGAAGGCTTGCGGGGCGAGAGTGCGGCGGGCCGGCCGGCACGCGG CAGGCCCGCACTCGGGGAGA
Downstream 100 bases:
>100_bases CTGGGCAAGAGAACACACCATCGCGGCGAGCGTGGTGGAAGTCAGTTAGATGCGGGTATGTGCAGTCGCCGTCATGAAGC TTCACGCGCAACCACCAACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 244; Mature: 243
Protein sequence:
>244_residues MTAVTVADCSNGSKARDCRQYRPGTSSRPIAEIVIRRCMGCLEIARWREQLNSVRKYIECVRTHPSLRAIADVLSWCCWV AALATCTLDLLDLPVAISFAQCVVLAPCDGARWNCGDVVTPRVLSGAADRLGYAGEKSLIAAIGRKLHIVEITTVDSASC DPFAVVASVQVTPVACISAASLALTCNAADALFFAGASGADVGTAWGADSPAVQAFSASARPGMIALRKAGDARNKWPNW VIAT
Sequences:
>Translated_244_residues MTAVTVADCSNGSKARDCRQYRPGTSSRPIAEIVIRRCMGCLEIARWREQLNSVRKYIECVRTHPSLRAIADVLSWCCWV AALATCTLDLLDLPVAISFAQCVVLAPCDGARWNCGDVVTPRVLSGAADRLGYAGEKSLIAAIGRKLHIVEITTVDSASC DPFAVVASVQVTPVACISAASLALTCNAADALFFAGASGADVGTAWGADSPAVQAFSASARPGMIALRKAGDARNKWPNW VIAT >Mature_243_residues TAVTVADCSNGSKARDCRQYRPGTSSRPIAEIVIRRCMGCLEIARWREQLNSVRKYIECVRTHPSLRAIADVLSWCCWVA ALATCTLDLLDLPVAISFAQCVVLAPCDGARWNCGDVVTPRVLSGAADRLGYAGEKSLIAAIGRKLHIVEITTVDSASCD PFAVVASVQVTPVACISAASLALTCNAADALFFAGASGADVGTAWGADSPAVQAFSASARPGMIALRKAGDARNKWPNWV IAT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25730; Mature: 25599
Theoretical pI: Translated: 8.07; Mature: 8.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.7 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 7.0 %Cys+Met (Translated Protein) 5.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAVTVADCSNGSKARDCRQYRPGTSSRPIAEIVIRRCMGCLEIARWREQLNSVRKYIEC CCEEEEEECCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VRTHPSLRAIADVLSWCCWVAALATCTLDLLDLPVAISFAQCVVLAPCDGARWNCGDVVT HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCCCCCCCCC PRVLSGAADRLGYAGEKSLIAAIGRKLHIVEITTVDSASCDPFAVVASVQVTPVACISAA HHHHHHHHHHHCCCCCHHHHHHHCCEEEEEEEEECCCCCCCCEEEEEECEECHHHHHHHH SLALTCNAADALFFAGASGADVGTAWGADSPAVQAFSASARPGMIALRKAGDARNKWPNW HEEEEECCCCCEEEECCCCCCCCCCCCCCCCHHHHHCCCCCCCEEEEECCCCCCCCCCCE VIAT EEEC >Mature Secondary Structure TAVTVADCSNGSKARDCRQYRPGTSSRPIAEIVIRRCMGCLEIARWREQLNSVRKYIEC CEEEEEECCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VRTHPSLRAIADVLSWCCWVAALATCTLDLLDLPVAISFAQCVVLAPCDGARWNCGDVVT HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCCCCCCCCC PRVLSGAADRLGYAGEKSLIAAIGRKLHIVEITTVDSASCDPFAVVASVQVTPVACISAA HHHHHHHHHHHCCCCCHHHHHHHCCEEEEEEEEECCCCCCCCEEEEEECEECHHHHHHHH SLALTCNAADALFFAGASGADVGTAWGADSPAVQAFSASARPGMIALRKAGDARNKWPNW HEEEEECCCCCEEEECCCCCCCCCCCCCCCCHHHHHCCCCCCCEEEEECCCCCCCCCCCE VIAT EEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA