| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21241237
Identifier: 21241237
GI number: 21241237
Start: 553894
End: 554379
Strand: Reverse
Name: 21241237
Synonym: XAC0464
Alternate gene names: NA
Gene position: 554379-553894 (Counterclockwise)
Preceding gene: 77748526
Following gene: 21241235
Centisome position: 10.71
GC content: 62.55
Gene sequence:
>486_bases ATGACCCAAAGCACCACGACCGCGCGACCGATCGAGCGCTATTTCGCCAGCTATTCCGACGATCATCAAAACGCGACCAA TCAGCAGATCCACGTGCTGGCGGTGCCTGCAATTCTGTGGTCGGTGGTGGCGCTGTTGTGGTGCATCCCGGTCGGCGGCA GCTGGTTCAGCAGCGGCGTATGGGCCGCGCTGTCGATGTTTGCGGCGTGGTCGTACTACAACCGGCTGTCGCGCCCGCTG GGGCTGGGGATGCTGGGGATCTTCTTCTTCTTCGGCTGTCTGTGCCGGTTGATCGAAGGCCGCACCGGGCTCGGGGGCCT GTTCACCACCGCGCTGACAGTGTTCGTGTTGGCGTGGATTGCACAGTTCGTCGGCCACAAGATCGAGGGCCGCAAACCGA GCTTTCTGACCGATCTGACCTATCTGCTGATCGGGCCGATCTGGGTGCTGGCCAAGGCATATCGCCAGCTGGGCTGGCGC TACTAG
Upstream 100 bases:
>100_bases GACGGGCGCGTCCCTCGTCATGCCACCAAGGCGTGGCGGGGGGCACATCTGCCATGGCGCCATCCGCGCGCGTATGCTTG GGTCATTCCTGGGAGGGAAC
Downstream 100 bases:
>100_bases AGCGTGTGATGCACGTTGAGATGAGATGCGTTGGCCGCCAGCGGTGCGGCGCGGGTGCTGCGTGGCGCCGGCTTGGCTGG CGCCAAGGCAAGCCGCGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 161; Mature: 160
Protein sequence:
>161_residues MTQSTTTARPIERYFASYSDDHQNATNQQIHVLAVPAILWSVVALLWCIPVGGSWFSSGVWAALSMFAAWSYYNRLSRPL GLGMLGIFFFFGCLCRLIEGRTGLGGLFTTALTVFVLAWIAQFVGHKIEGRKPSFLTDLTYLLIGPIWVLAKAYRQLGWR Y
Sequences:
>Translated_161_residues MTQSTTTARPIERYFASYSDDHQNATNQQIHVLAVPAILWSVVALLWCIPVGGSWFSSGVWAALSMFAAWSYYNRLSRPL GLGMLGIFFFFGCLCRLIEGRTGLGGLFTTALTVFVLAWIAQFVGHKIEGRKPSFLTDLTYLLIGPIWVLAKAYRQLGWR Y >Mature_160_residues TQSTTTARPIERYFASYSDDHQNATNQQIHVLAVPAILWSVVALLWCIPVGGSWFSSGVWAALSMFAAWSYYNRLSRPLG LGMLGIFFFFGCLCRLIEGRTGLGGLFTTALTVFVLAWIAQFVGHKIEGRKPSFLTDLTYLLIGPIWVLAKAYRQLGWRY
Specific function: Unknown
COG id: COG4539
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18091; Mature: 17960
Theoretical pI: Translated: 9.71; Mature: 9.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQSTTTARPIERYFASYSDDHQNATNQQIHVLAVPAILWSVVALLWCIPVGGSWFSSGV CCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH WAALSMFAAWSYYNRLSRPLGLGMLGIFFFFGCLCRLIEGRTGLGGLFTTALTVFVLAWI HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH AQFVGHKIEGRKPSFLTDLTYLLIGPIWVLAKAYRQLGWRY HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TQSTTTARPIERYFASYSDDHQNATNQQIHVLAVPAILWSVVALLWCIPVGGSWFSSGV CCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH WAALSMFAAWSYYNRLSRPLGLGMLGIFFFFGCLCRLIEGRTGLGGLFTTALTVFVLAWI HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH AQFVGHKIEGRKPSFLTDLTYLLIGPIWVLAKAYRQLGWRY HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA