| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is yhiP [H]
Identifier: 21241222
GI number: 21241222
Start: 538319
End: 539908
Strand: Direct
Name: yhiP [H]
Synonym: XAC0449
Alternate gene names: 21241222
Gene position: 538319-539908 (Clockwise)
Preceding gene: 21241221
Following gene: 21241223
Centisome position: 10.4
GC content: 63.33
Gene sequence:
>1590_bases GTGATCCTCGCGCGTCGCCCGGGCTCGCCTCGGTGCACCCAGCCATCACTGAATACGCAAGGGACCTCTATGAGCGTTGA CGCGACCGCGCCGACATCCGCCTCCAAACCGCCGCAGCCGCCGGCGCCCCCCGAGTTCCCCACGTTGCTCGGCCACCCGC GGCCGTTGTGGTTGCTGTTCATGACCGAATTCTGGGAACGCTTCGCGTTCTACGGCATTCGCTGGGCGCTGGTGTTGTAC ATCGTGGCGCAGTTCTTCAATGGCGATGCCACCGGCCAGGCGCCGGCGGGGCGAACCTATGGCGCCTACCTGGCGCTGGT GTACGCGGCGGCGATCTTCGGCGGCTACGTGGCCGACCGCGTGCTCGGTTACCAGCGCTCGATCCTGGTCGGGGCCGCGG TCATGGCGACCGGCCTGTTCCTGATCGCCATTCCCGACCCCACCATGTTCGAGATCGGCCTGGCCACCGTGGTGGTCGGC AACGGCTTGTTCAAACCGAACATTTCCACCATGGTCGGCAAGCTGTATTCGGTGGCCGATCCGCGCCGCGACAGCGGCTT CACCATCTTCTACATGGGCATCAACCTGGGCGCGATGATCTCGCCGGTGTTGACCCAGTTGCTGGCCGAAAAGGTGTTCG GCACTGACGTCATGCCGTCCTACAAGATGGTGTTCATGGCTTCCGGCGTGGGCATGCTGATCAGCCTGGTGTGGTTCTGG TTCGGCCGCGTCCAGCTCAAGGGCATCGGCGCACCGGCGCCGAACGCGCAGGGCATGGGCCGTGTGCTGATGGTGCTGGT GGGCTGCCTGCTGGCGATTCCGGGCGTGTACTTCCTGCTCGCGGTCGGTGCGGATGTGTTGCAGATCCTGCTGACGGTGC TGTTCATCGGCCTGTCGGTGATGCTGCTGGTGGAAGGCATCCGCGAAGGCAAGGTGCAACGCGACAAGGTGATTGCGATG CTGATCATCTTCGCCTTCAACGTCTTGTTCTGGATGTTCTTCGAACAGGCCGGCAGCTCGTTCACCTTCCTGGCCGACAA CATCGTCAACCGCAACTTCGGCAGCTGGACCTTCCCCACCGCGTGGTTCCAGTCGGTGAACTCCATCGCCATCATTGCGC TGGCACCGGTCATCGCCTGGATCTGGGTCAAGTCCGGCCGCTTCAATCCGTCGATCCCGCGCAAGTTCGGCCTGGGCCTG CTGTTCAACGGCCTGGCCTTCCTGCTGCTGATGTTTGCGCTGTCCAGCCTGGTCAACGACGCCGGCAAGATCCCGTTCTG GACCTTGTTCATGGTCTACGTCATCCAGTCGGTCGGCGAGCTGTGCCTGTCGCCGATCGGCCTGTCCATGGTGACCAAGC TGGCCCCGGTACGCCTGGTCGGTTTCGGCATGGGTGGCTGGTTTTTGTCCACCGGCATCGGCAATAACCTGTCGGGCATT TTCGCCGGCCATGTCAGCGGAAACGAAGGCATGAGCGTGTCCTCGGCGCTGGGTGGGTATACGTTCGGGTTCTGGGCGCT GGTGGGCGCCGGCGCGTTGCTGTTCCTGATCGCGCCGCTGATCAATAAATTGATGCATGGTGTGAAGTGA
Upstream 100 bases:
>100_bases CCTTCTCCCAACGGGAGAAGGGAGGCGGTGCAGAGGTTCTTCCCACCCACCGCCATCAGGTCGCCGACTCCGGCGAATTT GACGCGTACATGACGTCTAA
Downstream 100 bases:
>100_bases GGAGAACAGCGATGCCGATCAAGCCCCTTGTCTGTGGCCTGCTGCTGACCGGTCTGTTGAGCGCCTGCGGGCAGACCAGC AGCCCGCAGGACGCGCCGAA
Product: di-tripeptide transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 529; Mature: 529
Protein sequence:
>529_residues MILARRPGSPRCTQPSLNTQGTSMSVDATAPTSASKPPQPPAPPEFPTLLGHPRPLWLLFMTEFWERFAFYGIRWALVLY IVAQFFNGDATGQAPAGRTYGAYLALVYAAAIFGGYVADRVLGYQRSILVGAAVMATGLFLIAIPDPTMFEIGLATVVVG NGLFKPNISTMVGKLYSVADPRRDSGFTIFYMGINLGAMISPVLTQLLAEKVFGTDVMPSYKMVFMASGVGMLISLVWFW FGRVQLKGIGAPAPNAQGMGRVLMVLVGCLLAIPGVYFLLAVGADVLQILLTVLFIGLSVMLLVEGIREGKVQRDKVIAM LIIFAFNVLFWMFFEQAGSSFTFLADNIVNRNFGSWTFPTAWFQSVNSIAIIALAPVIAWIWVKSGRFNPSIPRKFGLGL LFNGLAFLLLMFALSSLVNDAGKIPFWTLFMVYVIQSVGELCLSPIGLSMVTKLAPVRLVGFGMGGWFLSTGIGNNLSGI FAGHVSGNEGMSVSSALGGYTFGFWALVGAGALLFLIAPLINKLMHGVK
Sequences:
>Translated_529_residues MILARRPGSPRCTQPSLNTQGTSMSVDATAPTSASKPPQPPAPPEFPTLLGHPRPLWLLFMTEFWERFAFYGIRWALVLY IVAQFFNGDATGQAPAGRTYGAYLALVYAAAIFGGYVADRVLGYQRSILVGAAVMATGLFLIAIPDPTMFEIGLATVVVG NGLFKPNISTMVGKLYSVADPRRDSGFTIFYMGINLGAMISPVLTQLLAEKVFGTDVMPSYKMVFMASGVGMLISLVWFW FGRVQLKGIGAPAPNAQGMGRVLMVLVGCLLAIPGVYFLLAVGADVLQILLTVLFIGLSVMLLVEGIREGKVQRDKVIAM LIIFAFNVLFWMFFEQAGSSFTFLADNIVNRNFGSWTFPTAWFQSVNSIAIIALAPVIAWIWVKSGRFNPSIPRKFGLGL LFNGLAFLLLMFALSSLVNDAGKIPFWTLFMVYVIQSVGELCLSPIGLSMVTKLAPVRLVGFGMGGWFLSTGIGNNLSGI FAGHVSGNEGMSVSSALGGYTFGFWALVGAGALLFLIAPLINKLMHGVK >Mature_529_residues MILARRPGSPRCTQPSLNTQGTSMSVDATAPTSASKPPQPPAPPEFPTLLGHPRPLWLLFMTEFWERFAFYGIRWALVLY IVAQFFNGDATGQAPAGRTYGAYLALVYAAAIFGGYVADRVLGYQRSILVGAAVMATGLFLIAIPDPTMFEIGLATVVVG NGLFKPNISTMVGKLYSVADPRRDSGFTIFYMGINLGAMISPVLTQLLAEKVFGTDVMPSYKMVFMASGVGMLISLVWFW FGRVQLKGIGAPAPNAQGMGRVLMVLVGCLLAIPGVYFLLAVGADVLQILLTVLFIGLSVMLLVEGIREGKVQRDKVIAM LIIFAFNVLFWMFFEQAGSSFTFLADNIVNRNFGSWTFPTAWFQSVNSIAIIALAPVIAWIWVKSGRFNPSIPRKFGLGL LFNGLAFLLLMFALSSLVNDAGKIPFWTLFMVYVIQSVGELCLSPIGLSMVTKLAPVRLVGFGMGGWFLSTGIGNNLSGI FAGHVSGNEGMSVSSALGGYTFGFWALVGAGALLFLIAPLINKLMHGVK
Specific function: Unknown
COG id: COG3104
COG function: function code E; Dipeptide/tripeptide permease
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PTR2/POT transporter (TC 2.A.17) family [H]
Homologues:
Organism=Homo sapiens, GI4827008, Length=388, Percent_Identity=23.4536082474227, Blast_Score=88, Evalue=2e-17, Organism=Homo sapiens, GI226371746, Length=373, Percent_Identity=24.9329758713137, Blast_Score=77, Evalue=4e-14, Organism=Homo sapiens, GI226371748, Length=363, Percent_Identity=24.5179063360882, Blast_Score=72, Evalue=1e-12, Organism=Escherichia coli, GI1789911, Length=439, Percent_Identity=32.8018223234624, Blast_Score=223, Evalue=2e-59, Organism=Escherichia coli, GI1787922, Length=458, Percent_Identity=32.0960698689956, Blast_Score=207, Evalue=1e-54, Organism=Escherichia coli, GI1786927, Length=450, Percent_Identity=31.3333333333333, Blast_Score=192, Evalue=5e-50, Organism=Escherichia coli, GI1790572, Length=456, Percent_Identity=28.5087719298246, Blast_Score=173, Evalue=2e-44, Organism=Caenorhabditis elegans, GI17569141, Length=433, Percent_Identity=24.4803695150115, Blast_Score=77, Evalue=3e-14, Organism=Caenorhabditis elegans, GI71987453, Length=486, Percent_Identity=22.0164609053498, Blast_Score=72, Evalue=8e-13, Organism=Drosophila melanogaster, GI28571098, Length=444, Percent_Identity=24.5495495495495, Blast_Score=101, Evalue=2e-21, Organism=Drosophila melanogaster, GI28571102, Length=444, Percent_Identity=24.5495495495495, Blast_Score=100, Evalue=3e-21, Organism=Drosophila melanogaster, GI28571100, Length=444, Percent_Identity=24.5495495495495, Blast_Score=100, Evalue=3e-21, Organism=Drosophila melanogaster, GI24639581, Length=353, Percent_Identity=24.6458923512748, Blast_Score=76, Evalue=5e-14, Organism=Drosophila melanogaster, GI24639583, Length=355, Percent_Identity=24.5070422535211, Blast_Score=76, Evalue=6e-14, Organism=Drosophila melanogaster, GI24639585, Length=355, Percent_Identity=24.5070422535211, Blast_Score=76, Evalue=7e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR016196 - InterPro: IPR000109 - InterPro: IPR005279 - InterPro: IPR018456 [H]
Pfam domain/function: PF00854 PTR2 [H]
EC number: NA
Molecular weight: Translated: 57038; Mature: 57038
Theoretical pI: Translated: 10.03; Mature: 10.03
Prosite motif: PS01023 PTR2_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILARRPGSPRCTQPSLNTQGTSMSVDATAPTSASKPPQPPAPPEFPTLLGHPRPLWLLF CEECCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHCCCCCHHHHHH MTEFWERFAFYGIRWALVLYIVAQFFNGDATGQAPAGRTYGAYLALVYAAAIFGGYVADR HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH VLGYQRSILVGAAVMATGLFLIAIPDPTMFEIGLATVVVGNGLFKPNISTMVGKLYSVAD HHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCC PRRDSGFTIFYMGINLGAMISPVLTQLLAEKVFGTDVMPSYKMVFMASGVGMLISLVWFW CCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCHHHHHHHHHHH FGRVQLKGIGAPAPNAQGMGRVLMVLVGCLLAIPGVYFLLAVGADVLQILLTVLFIGLSV HCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MLLVEGIREGKVQRDKVIAMLIIFAFNVLFWMFFEQAGSSFTFLADNIVNRNFGSWTFPT HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHCCCCCCCCCCH AWFQSVNSIAIIALAPVIAWIWVKSGRFNPSIPRKFGLGLLFNGLAFLLLMFALSSLVND HHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH AGKIPFWTLFMVYVIQSVGELCLSPIGLSMVTKLAPVRLVGFGMGGWFLSTGIGNNLSGI CCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCHHHEEECCCHHHHHCCCCCCCCCE FAGHVSGNEGMSVSSALGGYTFGFWALVGAGALLFLIAPLINKLMHGVK EEEECCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MILARRPGSPRCTQPSLNTQGTSMSVDATAPTSASKPPQPPAPPEFPTLLGHPRPLWLLF CEECCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHCCCCCHHHHHH MTEFWERFAFYGIRWALVLYIVAQFFNGDATGQAPAGRTYGAYLALVYAAAIFGGYVADR HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH VLGYQRSILVGAAVMATGLFLIAIPDPTMFEIGLATVVVGNGLFKPNISTMVGKLYSVAD HHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCC PRRDSGFTIFYMGINLGAMISPVLTQLLAEKVFGTDVMPSYKMVFMASGVGMLISLVWFW CCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCHHHHHHHHHHH FGRVQLKGIGAPAPNAQGMGRVLMVLVGCLLAIPGVYFLLAVGADVLQILLTVLFIGLSV HCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MLLVEGIREGKVQRDKVIAMLIIFAFNVLFWMFFEQAGSSFTFLADNIVNRNFGSWTFPT HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHCCCCCCCCCCH AWFQSVNSIAIIALAPVIAWIWVKSGRFNPSIPRKFGLGLLFNGLAFLLLMFALSSLVND HHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH AGKIPFWTLFMVYVIQSVGELCLSPIGLSMVTKLAPVRLVGFGMGGWFLSTGIGNNLSGI CCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCHHHEEECCCHHHHHCCCCCCCCCE FAGHVSGNEGMSVSSALGGYTFGFWALVGAGALLFLIAPLINKLMHGVK EEEECCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8969502; 9384377 [H]