| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is yedI [H]
Identifier: 21241196
GI number: 21241196
Start: 498318
End: 499259
Strand: Direct
Name: yedI [H]
Synonym: XAC0423
Alternate gene names: 21241196
Gene position: 498318-499259 (Clockwise)
Preceding gene: 21241193
Following gene: 21241198
Centisome position: 9.63
GC content: 66.56
Gene sequence:
>942_bases ATGGCCGGTGCCAGCCTGTTCACCCTGCTCGACGACATCGCCACGCTGCTGGACGACGTTTCCATCCTGACCAAGGTTGC GGCCAAGAAGACCGCAGGCGTGTTGGGCGACGATCTGGCGCTCAATGCGCAGCAGGTCACCGGCGTCACCGCCGACCGCG AACTGCCGGTGGTGTGGGCCGTGGCCAAGGGCTCGCTGGTCAACAAGATGATCCTGGTGCCGGCGGCGTTGGCGATCAGC GCGCTGGAAGCGTGGCTGCGCGGGCGCGGCTACAACGTCCCGTTGGTCATGCCGCTTATGATGATCGGTGGCGCCTACCT GTGCTTCGAGGGCGTGGAAAAGCTGGCGCACAAGTTTCTGCACAACGATGAGCAGGAAGCGCAGCGGCATGCCGAACGCA CCCGCGCGCTGGCCGACCAGAACGTGGACGTGGTGGCGCTGGAAAAGGACAAGGTGAAGGGCGCGATCCGCACCGATTTC ATCCTCTCGGCGGAGATCATCGTGCTCTCGCTGGGCGTGGTCTCGGAGGTGTCCTTCGGGCAGCAGGTGGCGGTGCTGGT GGCCATTGCGCTGGCGATGACCATCGGCGTCTACGGCGTGGTCGCCGCGATCGTGAAGCTGGACGACCTGGGCCTGTACC TGACCAGGAAGGGTGCCGCGCTGGCGGCCCTGGGTCGCGGCATCCTGGTGGCGGCGCCGTGGTTGATGAAGTTCCTGTCG GTGGCCGGCACGCTGGCGATGTTCCTGGTCGGCGGTGGCATCCTGGTGCACAACATCCCGGTGCTGCATCACCTGGTGGT GGACCTGGCCGAGTCGTCCGGCAGCATGGGCTGGCTGGTCGAAGCGCTGGGCAACATGCTGGTCGGCGTGGTCGCCGGTG CGCTCGTGCTGGGCGCGGTGATGCTGTTTCAGAAGCTGCGCGGGAGCAAGCCCGCGCATTGA
Upstream 100 bases:
>100_bases GCCCCGCCAACAGCATGCAACGACCGCGCAATGGCCGCTCATCACCCCACGCAGGTGCGGGATCGGCGAGAATTTGCGAC CACCCTAGAAGGACCTCCGC
Downstream 100 bases:
>100_bases TGCGCGGCGAGCCGCCAGACAAGCCAGCACGGTAAACACCGCGCGGCGATTGCTCGGGCGCACCGGGGTTCGCCGCCGGT CTAATCGGCGTTGATCACCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 313; Mature: 312
Protein sequence:
>313_residues MAGASLFTLLDDIATLLDDVSILTKVAAKKTAGVLGDDLALNAQQVTGVTADRELPVVWAVAKGSLVNKMILVPAALAIS ALEAWLRGRGYNVPLVMPLMMIGGAYLCFEGVEKLAHKFLHNDEQEAQRHAERTRALADQNVDVVALEKDKVKGAIRTDF ILSAEIIVLSLGVVSEVSFGQQVAVLVAIALAMTIGVYGVVAAIVKLDDLGLYLTRKGAALAALGRGILVAAPWLMKFLS VAGTLAMFLVGGGILVHNIPVLHHLVVDLAESSGSMGWLVEALGNMLVGVVAGALVLGAVMLFQKLRGSKPAH
Sequences:
>Translated_313_residues MAGASLFTLLDDIATLLDDVSILTKVAAKKTAGVLGDDLALNAQQVTGVTADRELPVVWAVAKGSLVNKMILVPAALAIS ALEAWLRGRGYNVPLVMPLMMIGGAYLCFEGVEKLAHKFLHNDEQEAQRHAERTRALADQNVDVVALEKDKVKGAIRTDF ILSAEIIVLSLGVVSEVSFGQQVAVLVAIALAMTIGVYGVVAAIVKLDDLGLYLTRKGAALAALGRGILVAAPWLMKFLS VAGTLAMFLVGGGILVHNIPVLHHLVVDLAESSGSMGWLVEALGNMLVGVVAGALVLGAVMLFQKLRGSKPAH >Mature_312_residues AGASLFTLLDDIATLLDDVSILTKVAAKKTAGVLGDDLALNAQQVTGVTADRELPVVWAVAKGSLVNKMILVPAALAISA LEAWLRGRGYNVPLVMPLMMIGGAYLCFEGVEKLAHKFLHNDEQEAQRHAERTRALADQNVDVVALEKDKVKGAIRTDFI LSAEIIVLSLGVVSEVSFGQQVAVLVAIALAMTIGVYGVVAAIVKLDDLGLYLTRKGAALAALGRGILVAAPWLMKFLSV AGTLAMFLVGGGILVHNIPVLHHLVVDLAESSGSMGWLVEALGNMLVGVVAGALVLGAVMLFQKLRGSKPAH
Specific function: Unknown
COG id: COG2354
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788268, Length=318, Percent_Identity=55.6603773584906, Blast_Score=318, Evalue=3e-88,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008526 [H]
Pfam domain/function: PF05661 DUF808 [H]
EC number: NA
Molecular weight: Translated: 32824; Mature: 32693
Theoretical pI: Translated: 6.89; Mature: 6.89
Prosite motif: PS00211 ABC_TRANSPORTER_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGASLFTLLDDIATLLDDVSILTKVAAKKTAGVLGDDLALNAQQVTGVTADRELPVVWA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCHHHHCCCCCCCCCCEEEE VAKGSLVNKMILVPAALAISALEAWLRGRGYNVPLVMPLMMIGGAYLCFEGVEKLAHKFL ECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHH HNDEQEAQRHAERTRALADQNVDVVALEKDKVKGAIRTDFILSAEIIVLSLGVVSEVSFG CCCHHHHHHHHHHHHHHHCCCCCEEEEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCC QQVAVLVAIALAMTIGVYGVVAAIVKLDDLGLYLTRKGAALAALGRGILVAAPWLMKFLS HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHCCCHHHHHHHHHHHHH VAGTLAMFLVGGGILVHNIPVLHHLVVDLAESSGSMGWLVEALGNMLVGVVAGALVLGAV HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH MLFQKLRGSKPAH HHHHHHCCCCCCC >Mature Secondary Structure AGASLFTLLDDIATLLDDVSILTKVAAKKTAGVLGDDLALNAQQVTGVTADRELPVVWA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCHHHHCCCCCCCCCCEEEE VAKGSLVNKMILVPAALAISALEAWLRGRGYNVPLVMPLMMIGGAYLCFEGVEKLAHKFL ECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHH HNDEQEAQRHAERTRALADQNVDVVALEKDKVKGAIRTDFILSAEIIVLSLGVVSEVSFG CCCHHHHHHHHHHHHHHHCCCCCEEEEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCC QQVAVLVAIALAMTIGVYGVVAAIVKLDDLGLYLTRKGAALAALGRGILVAAPWLMKFLS HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHCCCHHHHHHHHHHHHH VAGTLAMFLVGGGILVHNIPVLHHLVVDLAESSGSMGWLVEALGNMLVGVVAGALVLGAV HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH MLFQKLRGSKPAH HHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503; 2527357; 7567469 [H]