| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is aspH
Identifier: 21241156
GI number: 21241156
Start: 453120
End: 454025
Strand: Reverse
Name: aspH
Synonym: XAC0382
Alternate gene names: NA
Gene position: 454025-453120 (Counterclockwise)
Preceding gene: 21241157
Following gene: 21241152
Centisome position: 8.77
GC content: 63.02
Gene sequence:
>906_bases ATGTTGAAGTGGCTCCTCATCGCGTTGTTCATCGCATCGGCGCTCTACATCCATTACCGCGGTCGCGTGCGGCACCGGCT CAGCCGGCAGTTGCTGGACCATTCCACCTTCATGGCCCCCATCAACACGCTGATGTACCTGTGTTCGCGGGTGCCGACCA CGCCATTCATCGACCCGGGCAAGGAATTTCCCGAGCTGGCGCCGCTGCGCGCCAGCTGGCCACTGATCCGCGACGAAGCG GTGGCGTTGCAACAGATGCAGAAGATCCGCGCTGCTGAAGGCTATACCGACATCGGCTTCAATTCGTTCTTCCGGCGTGG CTGGAAGCGCTTCTATCTGAAGTGGTACGGCACCGCGCATCCGTCGGCAGCCGAATTGTGTCCGCAGACCACCGCCTTGC TGAAGTCCATTCCCACGGTCAAGGCAGCGATGTTCGCCGAGCTGCCGCCGGGCAGCGAACTACGCCCGCACCGCGACCCG TTCGCCGGCTCCATGCGCCTGCACCTGGGCCTGGCCACACCCAACGACGACCGTTGCTTCATCGACGTCGACGGGCAACG CCACAGCTGGCGCGATGGCGAGTGGACCATGTTCGATGAAACCTACATCCACTACGCGCGCAACGACACCGACCAGGACC GCATCATCCTGTTTTGCGATATCGAACGCCCGATGCGTTGGCGCTGGGCGGCTGCGGTGAACCGCTTCGTCGGCCGCAGC CTGCTCTCGGCCGGCGCCTCGCCCAATCAGGAAGGCGACAAGACCGGCGGCATCAATCGCGTGTTCCGCTATTTCTACGC CGCACGCCTCAAGGCCAAGGCGCTGAAGGAACGCAACAACCCGCTGTACCAGGTGCTCAAGTGGGGCATCTTCATCCTGG TGGTGGTCGGAATCGTGCTGCTGTAA
Upstream 100 bases:
>100_bases TGTTCGATGGTGGCTACCGACACGACGCAGCAGTGCTGCGTGCGCTGCTTGGCAGCCACTTTCACGTTTGCGGCCCCCCG CCCCCCAATCGGCCTCCCCC
Downstream 100 bases:
>100_bases CCCTCGCCCACCCACCTAGGAACGCACTTGGCGCGACCGGCATCGCCGGTAACGCCTCATCGCGCGCAAGCGTGCTCCTA CATAGGCGCAGCTCCGGCCG
Product: aspartyl-asparaginyl beta-hydroxylase
Products: NA
Alternate protein names: Beta-Hydroxylase; Membrane-Bound Beta-Hydroxylase; Asparaginyl Beta-Hydroxylase; Aspartyl/Asparaginyl Beta-Hydroxylase Family Protein; Lipid A-Myristate Beta-Hydroxylase; Aspartyl-Asparaginyl Beta-Hydroxylase; Aspartyl/Asparaginyl Beta-Hydroxylase Family; Lipopolysaccharide Biosynthetic; Peptide-Aspartate Beta-Dioxygenase; Hydroxylase; Peptide-Aspartate B-Dioxygenase; Aspartate Beta-Hydroxylase; Aspartyl/Asparaginyl Beta-Hydroxylase Transmembrane Protein; Beta-Hydroxylase Aspartyl/Asparaginyl Family; Lipopolysaccharide Biosynthetic Protein; Fe(2+)/Alpha-Ketoglutarate-Dependent Dioxygenase LpxO; Peptide Aspartate B-Dioxygenase; Dioxygenase; Aspartyl/Asparaginyl Beta-Hydroxylase Protein; Aspartyl/Asparaginyl-Beta-Hydroxylase
Number of amino acids: Translated: 301; Mature: 301
Protein sequence:
>301_residues MLKWLLIALFIASALYIHYRGRVRHRLSRQLLDHSTFMAPINTLMYLCSRVPTTPFIDPGKEFPELAPLRASWPLIRDEA VALQQMQKIRAAEGYTDIGFNSFFRRGWKRFYLKWYGTAHPSAAELCPQTTALLKSIPTVKAAMFAELPPGSELRPHRDP FAGSMRLHLGLATPNDDRCFIDVDGQRHSWRDGEWTMFDETYIHYARNDTDQDRIILFCDIERPMRWRWAAAVNRFVGRS LLSAGASPNQEGDKTGGINRVFRYFYAARLKAKALKERNNPLYQVLKWGIFILVVVGIVLL
Sequences:
>Translated_301_residues MLKWLLIALFIASALYIHYRGRVRHRLSRQLLDHSTFMAPINTLMYLCSRVPTTPFIDPGKEFPELAPLRASWPLIRDEA VALQQMQKIRAAEGYTDIGFNSFFRRGWKRFYLKWYGTAHPSAAELCPQTTALLKSIPTVKAAMFAELPPGSELRPHRDP FAGSMRLHLGLATPNDDRCFIDVDGQRHSWRDGEWTMFDETYIHYARNDTDQDRIILFCDIERPMRWRWAAAVNRFVGRS LLSAGASPNQEGDKTGGINRVFRYFYAARLKAKALKERNNPLYQVLKWGIFILVVVGIVLL >Mature_301_residues MLKWLLIALFIASALYIHYRGRVRHRLSRQLLDHSTFMAPINTLMYLCSRVPTTPFIDPGKEFPELAPLRASWPLIRDEA VALQQMQKIRAAEGYTDIGFNSFFRRGWKRFYLKWYGTAHPSAAELCPQTTALLKSIPTVKAAMFAELPPGSELRPHRDP FAGSMRLHLGLATPNDDRCFIDVDGQRHSWRDGEWTMFDETYIHYARNDTDQDRIILFCDIERPMRWRWAAAVNRFVGRS LLSAGASPNQEGDKTGGINRVFRYFYAARLKAKALKERNNPLYQVLKWGIFILVVVGIVLL
Specific function: Unknown
COG id: COG3555
COG function: function code O; Aspartyl/asparaginyl beta-hydroxylase and related dioxygenases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI194328779, Length=184, Percent_Identity=27.7173913043478, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI14589866, Length=161, Percent_Identity=27.3291925465839, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI258613943, Length=161, Percent_Identity=27.3291925465839, Blast_Score=67, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34720; Mature: 34720
Theoretical pI: Translated: 10.15; Mature: 10.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKWLLIALFIASALYIHYRGRVRHRLSRQLLDHSTFMAPINTLMYLCSRVPTTPFIDPG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC KEFPELAPLRASWPLIRDEAVALQQMQKIRAAEGYTDIGFNSFFRRGWKRFYLKWYGTAH CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHEECCCC PSAAELCPQTTALLKSIPTVKAAMFAELPPGSELRPHRDPFAGSMRLHLGLATPNDDRCF CCHHHHCHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEE IDVDGQRHSWRDGEWTMFDETYIHYARNDTDQDRIILFCDIERPMRWRWAAAVNRFVGRS EEECCCCCCCCCCCEEEEHHHHHEECCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHH LLSAGASPNQEGDKTGGINRVFRYFYAARLKAKALKERNNPLYQVLKWGIFILVVVGIVL HHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH L C >Mature Secondary Structure MLKWLLIALFIASALYIHYRGRVRHRLSRQLLDHSTFMAPINTLMYLCSRVPTTPFIDPG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC KEFPELAPLRASWPLIRDEAVALQQMQKIRAAEGYTDIGFNSFFRRGWKRFYLKWYGTAH CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHEECCCC PSAAELCPQTTALLKSIPTVKAAMFAELPPGSELRPHRDPFAGSMRLHLGLATPNDDRCF CCHHHHCHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEE IDVDGQRHSWRDGEWTMFDETYIHYARNDTDQDRIILFCDIERPMRWRWAAAVNRFVGRS EEECCCCCCCCCCCEEEEHHHHHEECCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHH LLSAGASPNQEGDKTGGINRVFRYFYAARLKAKALKERNNPLYQVLKWGIFILVVVGIVL HHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH L C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA