| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is yehS [H]
Identifier: 21241068
GI number: 21241068
Start: 352363
End: 352836
Strand: Reverse
Name: yehS [H]
Synonym: XAC0294
Alternate gene names: 21241068
Gene position: 352836-352363 (Counterclockwise)
Preceding gene: 21241069
Following gene: 21241067
Centisome position: 6.82
GC content: 64.98
Gene sequence:
>474_bases ATGATCCACAACGATGTACTGCGCAGCATCCGCTACATGCTCGACCTCAGCGACGACAAGGTGGTGGACATCACCCACTT GGCCGACCCCGAGTTCGCGCTCGACAAGCCGCAGGTACAGGCCTGGCTGAAGAAGGAAGACGAGCCGGGCTTCGAGCCCT GCACCGATGCGATGCTGGCGCGTTTCCTCGACGGTCTGGTGCTGCGCTTCCGCGGCCGCGACGAGAGCCAGCCGCCACGC CCGCTGGAAACCCGCGTCGGCAACAACCTGGTGTTGAAGAAGCTGCGCGTGGCCTTCGAACTGAAGGACGTCGACATGCA CGCCATCTTCGCCAGCGCCGGTTTCCCGCTGTCCAAGCCGGAACTCTCCGCACTGTTTCGCCAACCCGGCCACAAGAATT TCCGCCCCTGCGGCGACCAGCTGCTGCGCGCCTTCCTCAAGGGCCTGACCGCCCGGATGCGCGAAGCCGGTTGA
Upstream 100 bases:
>100_bases TGCCGGCGCCGGAGCCCCCTGCGCACAGTGTCAGACCGGTTTCACTCAAGCCCCGTAGAATGGCCGCTTTCCGGCGACAG GCCGGGGCACCGGAACGGTC
Downstream 100 bases:
>100_bases CGTCTGAGTGGTGCGCTTGGCCGACTCGGCCGGTCTGACGACGATGCCATGCGACGTACGGCTGTCGTGTTCACCGAGGA CAGTGGCCTGCGCGGTTTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 157; Mature: 157
Protein sequence:
>157_residues MIHNDVLRSIRYMLDLSDDKVVDITHLADPEFALDKPQVQAWLKKEDEPGFEPCTDAMLARFLDGLVLRFRGRDESQPPR PLETRVGNNLVLKKLRVAFELKDVDMHAIFASAGFPLSKPELSALFRQPGHKNFRPCGDQLLRAFLKGLTARMREAG
Sequences:
>Translated_157_residues MIHNDVLRSIRYMLDLSDDKVVDITHLADPEFALDKPQVQAWLKKEDEPGFEPCTDAMLARFLDGLVLRFRGRDESQPPR PLETRVGNNLVLKKLRVAFELKDVDMHAIFASAGFPLSKPELSALFRQPGHKNFRPCGDQLLRAFLKGLTARMREAG >Mature_157_residues MIHNDVLRSIRYMLDLSDDKVVDITHLADPEFALDKPQVQAWLKKEDEPGFEPCTDAMLARFLDGLVLRFRGRDESQPPR PLETRVGNNLVLKKLRVAFELKDVDMHAIFASAGFPLSKPELSALFRQPGHKNFRPCGDQLLRAFLKGLTARMREAG
Specific function: Unknown
COG id: COG4807
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788443, Length=152, Percent_Identity=50, Blast_Score=158, Evalue=1e-40,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009921 [H]
Pfam domain/function: PF07308 DUF1456 [H]
EC number: NA
Molecular weight: Translated: 17856; Mature: 17856
Theoretical pI: Translated: 8.25; Mature: 8.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIHNDVLRSIRYMLDLSDDKVVDITHLADPEFALDKPQVQAWLKKEDEPGFEPCTDAMLA CCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHH RFLDGLVLRFRGRDESQPPRPLETRVGNNLVLKKLRVAFELKDVDMHAIFASAGFPLSKP HHHHHHHHHHCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCH ELSALFRQPGHKNFRPCGDQLLRAFLKGLTARMREAG HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MIHNDVLRSIRYMLDLSDDKVVDITHLADPEFALDKPQVQAWLKKEDEPGFEPCTDAMLA CCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHH RFLDGLVLRFRGRDESQPPRPLETRVGNNLVLKKLRVAFELKDVDMHAIFASAGFPLSKP HHHHHHHHHHCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCH ELSALFRQPGHKNFRPCGDQLLRAFLKGLTARMREAG HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]