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The map label for this gene is yncB [H]

Identifier: 21241061

GI number: 21241061

Start: 340916

End: 341944

Strand: Reverse

Name: yncB [H]

Synonym: XAC0287

Alternate gene names: 21241061

Gene position: 341944-340916 (Counterclockwise)

Preceding gene: 21241062

Following gene: 21241060

Centisome position: 6.61

GC content: 65.11

Gene sequence:

>1029_bases
ATGACGTCCATCATCAACCGCCGCATCGTGCTGGCATCGCGCCCGCACGGAGAACCCAGCGCGGACAACTTTCGCATCGA
AGAGGTCCCCGTCGCACCGACCGGCCACGATCAGATTCTGGTCCGCAATCGCTTCCTGTCGCTGGACCCGTATATGCGTG
GCCGCATGGACGAAGGCCCCTCCTACGCCGCGCCAGTGGCCATCGATGCCGTAATGGAAGGCGGCACCGTTGGCGAAGTC
ATCGCGTCCAATCACGCCGACTATCATCCTGGCGATCTGTTGGTGCTGCCCGGCGGCTGGCAGGCGCATAGCCTGCTGAC
CCCGACAACACCCTTGCGCAAGCTGCCCAAGGACGACAGCCTGCCACCGAGCACCGCGCTCGGCGTGTATGGCATGCCTG
GCTTTACCGCGTATGCGGGCCTGCATGAAATCGGTAAGCCACAGCCCGGCGAAACGCTGGTGGTCGCTGCCGCCAGCGGC
CCGGTCGGCGCCACGGTGGCGCAGCTGGCACGTCTGCAGGGCCTGCGCGTGGTCGCCATTGCCGGTGGCGCGGAAAAAGT
ACGTTATCTGCGTGACACGCTGCATGTGGATGTGGCGCTGGACCACCGCGCCGACGACTTTGCAGAGCAGTTGCGCGCCG
CAACCCCGAACGGCATCGACATCTATTTCGAAAACGTGGGTGGCAAGGTGTTCGATGCGGTGCTGCCGCAGCTCAACGAG
TTCGCACGCATCCCGGTCTGCGGCGTGATCGCGACCTACAACAGCCGCGGGCAAGCCCACCCCGGCCCGGATCGCCTGCC
CGACTTCATGGGCCAGGTGCTGCGTAAACGCCTGACGGTGCGCGGCTTCATCCAGCACGATTTCATCCGCCTGATGCCTG
CCTTCCTGCGCGAAATGGGCCAGTGGCTGCGCGAAGACAAAATTCAGTACCGCGAGCACGTGCTGCACGGCCTGGACAGC
GCACCGCAGGGCCTGATCGACGTGCTACGCGGCAAGAACTTCGGCAAGGCCGTCGTCGCTCTCGCCTAG

Upstream 100 bases:

>100_bases
GTACACGCACTGCGCCCGTGACGGCGCTCCCCCGCGCAGCCGCATCAGCGGCCGTGCTCACCCGACCGCGCATGCGCGGA
CCGTTAGCGAGCCATTTCCC

Downstream 100 bases:

>100_bases
CGATAGTCGCCGCGCTCCTCGCACCCGCTCGCTCTTGCGATCTCCATTCCAAGGCAATGCGATGAGCGGGGCGCCAGCGC
CAGTCATTCGTGATCCCACA

Product: quinone oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 342; Mature: 341

Protein sequence:

>342_residues
MTSIINRRIVLASRPHGEPSADNFRIEEVPVAPTGHDQILVRNRFLSLDPYMRGRMDEGPSYAAPVAIDAVMEGGTVGEV
IASNHADYHPGDLLVLPGGWQAHSLLTPTTPLRKLPKDDSLPPSTALGVYGMPGFTAYAGLHEIGKPQPGETLVVAAASG
PVGATVAQLARLQGLRVVAIAGGAEKVRYLRDTLHVDVALDHRADDFAEQLRAATPNGIDIYFENVGGKVFDAVLPQLNE
FARIPVCGVIATYNSRGQAHPGPDRLPDFMGQVLRKRLTVRGFIQHDFIRLMPAFLREMGQWLREDKIQYREHVLHGLDS
APQGLIDVLRGKNFGKAVVALA

Sequences:

>Translated_342_residues
MTSIINRRIVLASRPHGEPSADNFRIEEVPVAPTGHDQILVRNRFLSLDPYMRGRMDEGPSYAAPVAIDAVMEGGTVGEV
IASNHADYHPGDLLVLPGGWQAHSLLTPTTPLRKLPKDDSLPPSTALGVYGMPGFTAYAGLHEIGKPQPGETLVVAAASG
PVGATVAQLARLQGLRVVAIAGGAEKVRYLRDTLHVDVALDHRADDFAEQLRAATPNGIDIYFENVGGKVFDAVLPQLNE
FARIPVCGVIATYNSRGQAHPGPDRLPDFMGQVLRKRLTVRGFIQHDFIRLMPAFLREMGQWLREDKIQYREHVLHGLDS
APQGLIDVLRGKNFGKAVVALA
>Mature_341_residues
TSIINRRIVLASRPHGEPSADNFRIEEVPVAPTGHDQILVRNRFLSLDPYMRGRMDEGPSYAAPVAIDAVMEGGTVGEVI
ASNHADYHPGDLLVLPGGWQAHSLLTPTTPLRKLPKDDSLPPSTALGVYGMPGFTAYAGLHEIGKPQPGETLVVAAASGP
VGATVAQLARLQGLRVVAIAGGAEKVRYLRDTLHVDVALDHRADDFAEQLRAATPNGIDIYFENVGGKVFDAVLPQLNEF
ARIPVCGVIATYNSRGQAHPGPDRLPDFMGQVLRKRLTVRGFIQHDFIRLMPAFLREMGQWLREDKIQYREHVLHGLDSA
PQGLIDVLRGKNFGKAVVALA

Specific function: Unknown

COG id: COG2130

COG function: function code R; Putative NADP-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the NADP-dependent oxidoreductase L4BD family [H]

Homologues:

Organism=Homo sapiens, GI226246682, Length=349, Percent_Identity=34.3839541547278, Blast_Score=201, Evalue=6e-52,
Organism=Homo sapiens, GI226246680, Length=349, Percent_Identity=34.3839541547278, Blast_Score=201, Evalue=6e-52,
Organism=Homo sapiens, GI22748929, Length=349, Percent_Identity=34.3839541547278, Blast_Score=201, Evalue=6e-52,
Organism=Homo sapiens, GI226059159, Length=329, Percent_Identity=35.5623100303951, Blast_Score=197, Evalue=2e-50,
Organism=Homo sapiens, GI226059133, Length=329, Percent_Identity=35.5623100303951, Blast_Score=197, Evalue=2e-50,
Organism=Homo sapiens, GI226056130, Length=244, Percent_Identity=38.1147540983607, Blast_Score=167, Evalue=2e-41,
Organism=Homo sapiens, GI28557745, Length=342, Percent_Identity=27.7777777777778, Blast_Score=94, Evalue=3e-19,
Organism=Escherichia coli, GI226510941, Length=338, Percent_Identity=58.5798816568047, Blast_Score=385, Evalue=1e-108,
Organism=Caenorhabditis elegans, GI133901710, Length=355, Percent_Identity=29.8591549295775, Blast_Score=160, Evalue=7e-40,
Organism=Caenorhabditis elegans, GI133901712, Length=355, Percent_Identity=29.8591549295775, Blast_Score=160, Evalue=7e-40,
Organism=Saccharomyces cerevisiae, GI6323504, Length=287, Percent_Identity=29.2682926829268, Blast_Score=105, Evalue=7e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013149
- InterPro:   IPR002085
- InterPro:   IPR011032
- InterPro:   IPR016040 [H]

Pfam domain/function: PF00107 ADH_zinc_N [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 37142; Mature: 37011

Theoretical pI: Translated: 7.18; Mature: 7.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSIINRRIVLASRPHGEPSADNFRIEEVPVAPTGHDQILVRNRFLSLDPYMRGRMDEGP
CCCCCCCEEEEEECCCCCCCCCCEEEEEECCCCCCCCEEEEECCCCCCCHHHHCCCCCCC
SYAAPVAIDAVMEGGTVGEVIASNHADYHPGDLLVLPGGWQAHSLLTPTTPLRKLPKDDS
CCCCCHHHHHHHCCCCHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHCCCCCC
LPPSTALGVYGMPGFTAYAGLHEIGKPQPGETLVVAAASGPVGATVAQLARLQGLRVVAI
CCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCEEEEE
AGGAEKVRYLRDTLHVDVALDHRADDFAEQLRAATPNGIDIYFENVGGKVFDAVLPQLNE
ECCHHHHHHHHHHHEEEEEECCCHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHH
FARIPVCGVIATYNSRGQAHPGPDRLPDFMGQVLRKRLTVRGFIQHDFIRLMPAFLREMG
HHCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QWLREDKIQYREHVLHGLDSAPQGLIDVLRGKNFGKAVVALA
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCEEEEEC
>Mature Secondary Structure 
TSIINRRIVLASRPHGEPSADNFRIEEVPVAPTGHDQILVRNRFLSLDPYMRGRMDEGP
CCCCCCEEEEEECCCCCCCCCCEEEEEECCCCCCCCEEEEECCCCCCCHHHHCCCCCCC
SYAAPVAIDAVMEGGTVGEVIASNHADYHPGDLLVLPGGWQAHSLLTPTTPLRKLPKDDS
CCCCCHHHHHHHCCCCHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHCCCCCC
LPPSTALGVYGMPGFTAYAGLHEIGKPQPGETLVVAAASGPVGATVAQLARLQGLRVVAI
CCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCEEEEE
AGGAEKVRYLRDTLHVDVALDHRADDFAEQLRAATPNGIDIYFENVGGKVFDAVLPQLNE
ECCHHHHHHHHHHHEEEEEECCCHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHH
FARIPVCGVIATYNSRGQAHPGPDRLPDFMGQVLRKRLTVRGFIQHDFIRLMPAFLREMG
HHCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QWLREDKIQYREHVLHGLDSAPQGLIDVLRGKNFGKAVVALA
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]