| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21240964
Identifier: 21240964
GI number: 21240964
Start: 235221
End: 235997
Strand: Direct
Name: 21240964
Synonym: XAC0190
Alternate gene names: NA
Gene position: 235221-235997 (Clockwise)
Preceding gene: 77748517
Following gene: 21240965
Centisome position: 4.54
GC content: 66.54
Gene sequence:
>777_bases ATGCACCCGACGGATTCCAAAACGGCGGTGCAAAGTGTAACAGCAAGCTTTCACGCACCTGTCCCTGTGCGGATGCGCAG CCGACGCGCTGCGGGTAGGATGGGGATGGGAAGGGGTCGTTTGCTGTCAGGGGAAAACACAGTGAAAAGGAAATACGCGT GGGCCGCTCTGGCCCTGCTCGGAGGGGTGTGGTCGTTGGCGCAGGCGCAGAGCTTGCCCAAGCCCAAGGAGTTCTATTTC GACGAAGACCGCAGTACCACCAAGGCGGTGGTGGCCGTACAAGGCCAGGGCGATGCAGTCGTCGACCGGCTGGCGGCGAT GGTGCAACGTGACGCGCGCGCGGCCGATCCACGCGCGCAGTTGGCGGCGCTGGCCTACGCCGGTGGGCGTACCCAGTTGG GCGATGAGTTGTATCAGGGCGCGCTGGCGCTGGTCTCCAACGGCAGCCAGCAGTACCGGGCCATCACCTGGAACTATGGG TGGGACCTGCTGCGTGCCGACCAGCCCGACAAGGCACTGCAGCAATGGGCCAATCTGGCCAATGGCCGTCCGGCCACGCC GGAATGGCTGCCAACCACGGCTGCACTGGCGCTTTGGCGCGCCGGGCGCAAGCAGGAGGCGGTCGAGTGGTATGCGGCAG CCGTGCGCACCTGGCCGGACCGTTGGAGCAGCCCCGCCAACTACGCCAGCCTGTTGCCGGAATGGCGCGAAGCAGAGCGC GCCAGCCTGGCCGAGGTTTTCGCGGCCTGGCAGGCCAACCCGCCAGCGTTTCCGTAA
Upstream 100 bases:
>100_bases CGTGTTGGCAGAGTCGGGAGAAGAAAGCGCAGCAGTACTGGTCATGGCGTGCCCGAAAAGGGTGGCTGGGCCCCCGGTGC ATGTCATCTGAAACTATCTG
Downstream 100 bases:
>100_bases GTGCCTCGCCGCGCTGCGGGGAGTTCCTGCGGCGCGGATTGTGCAGCGGGCTGATGCTGGGCTAGGCATTTTTGCCGGTC AACCAGGCCTCTCTCTGGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 258; Mature: 258
Protein sequence:
>258_residues MHPTDSKTAVQSVTASFHAPVPVRMRSRRAAGRMGMGRGRLLSGENTVKRKYAWAALALLGGVWSLAQAQSLPKPKEFYF DEDRSTTKAVVAVQGQGDAVVDRLAAMVQRDARAADPRAQLAALAYAGGRTQLGDELYQGALALVSNGSQQYRAITWNYG WDLLRADQPDKALQQWANLANGRPATPEWLPTTAALALWRAGRKQEAVEWYAAAVRTWPDRWSSPANYASLLPEWREAER ASLAEVFAAWQANPPAFP
Sequences:
>Translated_258_residues MHPTDSKTAVQSVTASFHAPVPVRMRSRRAAGRMGMGRGRLLSGENTVKRKYAWAALALLGGVWSLAQAQSLPKPKEFYF DEDRSTTKAVVAVQGQGDAVVDRLAAMVQRDARAADPRAQLAALAYAGGRTQLGDELYQGALALVSNGSQQYRAITWNYG WDLLRADQPDKALQQWANLANGRPATPEWLPTTAALALWRAGRKQEAVEWYAAAVRTWPDRWSSPANYASLLPEWREAER ASLAEVFAAWQANPPAFP >Mature_258_residues MHPTDSKTAVQSVTASFHAPVPVRMRSRRAAGRMGMGRGRLLSGENTVKRKYAWAALALLGGVWSLAQAQSLPKPKEFYF DEDRSTTKAVVAVQGQGDAVVDRLAAMVQRDARAADPRAQLAALAYAGGRTQLGDELYQGALALVSNGSQQYRAITWNYG WDLLRADQPDKALQQWANLANGRPATPEWLPTTAALALWRAGRKQEAVEWYAAAVRTWPDRWSSPANYASLLPEWREAER ASLAEVFAAWQANPPAFP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28346; Mature: 28346
Theoretical pI: Translated: 10.31; Mature: 10.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHPTDSKTAVQSVTASFHAPVPVRMRSRRAAGRMGMGRGRLLSGENTVKRKYAWAALALL CCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCEECCCHHHHHHHHHHHHHHH GGVWSLAQAQSLPKPKEFYFDEDRSTTKAVVAVQGQGDAVVDRLAAMVQRDARAADPRAQ HHHHHHHHHHCCCCCHHHCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHCCCHHHH LAALAYAGGRTQLGDELYQGALALVSNGSQQYRAITWNYGWDLLRADQPDKALQQWANLA HHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHC NGRPATPEWLPTTAALALWRAGRKQEAVEWYAAAVRTWPDRWSSPANYASLLPEWREAER CCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCHHHCCCCCHHHHHCHHHHHHHH ASLAEVFAAWQANPPAFP HHHHHHHHHHCCCCCCCC >Mature Secondary Structure MHPTDSKTAVQSVTASFHAPVPVRMRSRRAAGRMGMGRGRLLSGENTVKRKYAWAALALL CCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCEECCCHHHHHHHHHHHHHHH GGVWSLAQAQSLPKPKEFYFDEDRSTTKAVVAVQGQGDAVVDRLAAMVQRDARAADPRAQ HHHHHHHHHHCCCCCHHHCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHCCCHHHH LAALAYAGGRTQLGDELYQGALALVSNGSQQYRAITWNYGWDLLRADQPDKALQQWANLA HHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHC NGRPATPEWLPTTAALALWRAGRKQEAVEWYAAAVRTWPDRWSSPANYASLLPEWREAER CCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCHHHCCCCCHHHHHCHHHHHHHH ASLAEVFAAWQANPPAFP HHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA