| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21240959
Identifier: 21240959
GI number: 21240959
Start: 227580
End: 228863
Strand: Direct
Name: 21240959
Synonym: XAC0185
Alternate gene names: NA
Gene position: 227580-228863 (Clockwise)
Preceding gene: 21240957
Following gene: 77748517
Centisome position: 4.4
GC content: 65.89
Gene sequence:
>1284_bases ATGTCTGCACTCTCTCCTCTGCTGGGCCACCTCCAGCAACAGCAGTTGACGCTGCTGGAACGCTACGCGCAGACCCGCGC GCTGAGCGACCGTCTCGCCGCACCCTTGAGCGCCGAAGACGCGATGGTGCAGAGCATGCCGGATGCGAGCCCGAGCAAAT GGCATCTGGCGCACACCACCTGGTTCTTCGAACGCTTCGTGCTGCAGGCCGATCCGGCGTACCGCGTGTTCGACCCGGCC TGGGATTTCCTGTTCAACAGCTACTACCAGAGCGTGGGGCCGATGCATGCGCGGGCGCGCCGCGGCGTGCTGTCGCGCCC TTCGTTGCAGCAGGTGCGCGACTACCGTGCTGCGGTCGATATGCAGATGCAGCAGCGCTTGCGCGACGGCCTGCTCGATG CGCAGGCCTGCACCATCGTGCAGCTCGGTATCCAGCACGAGCAGCAACACCAGGAGTTGCTGCTGACCGATATCAAGCAT GCGCTGTGGAGCAACCCGTTGCAGCCGGCCTACCGCGACCTGCCCACGCCGCCTGCGGCCGTCGCCAGCCCGCTGCGCTG GCATGCGCGCGACGAGCAGATCGTCCAGATCGGCGCCGCCGCCTGGCCACAGGCCGACAGCTTCGCCTACGACAACGAAT CGCCACGCCATCGCGTGCTGGTCGGTGCGCATGCGCTGGGCAGCCGTGTGGTCACCAACGCCGAGTTCCAGCACTTCATC GATGATGGCGGCTACCGCAGTGCTGGTGCCTGGCTCAGCGATGGCTGGGCGATGGTGCAGGCGCAAGGTTGGCAACATCC CTTGTATTGGGATGCCGATGGCCGCGAGTTCACCCTGCACGGTTGGCGCACGCGCGATCCGCATGCGCCGGTCTGCCACC TGAGCCTGTTCGAAGCCGATGCGTTCGCACGCTGGGCCGGTGCGCGCCTTCCCACCGAAGCCGAGTGGGAGCAGGCTGCG ACCGGCGTGCCGGTACAGGGCAATTTCGTCGACACCGATGCGTTGCATCCGCGTGGCGCCGAAGCAGTGGACACCGGTAT GCAGCAGCTGTTCGGCGATGTCTGGGAGTGGACCGGCAGCGCGTACCTGCCGTATCCAGGCTTTACCCCGTGGCCCGGGT CGCTGGGCGAATACAACGGCAAATTCATGAATGCGCAATGGGTCTTGCGTGGTGGCAGTTGCGCCAGCCCGGCCAGCCAT CTGCGTGCCAGTTACCGCAACTTCTTCTCCTCCGATGCGCGTTGGCAATTTGCCGGCGTGCGCCTTGCCAAGGATCTGCC TTGA
Upstream 100 bases:
>100_bases AGCGTACTGGACAGAGATGGCGATGACATGTCTACAGCTTACCGCTGGCTGCCACGTTGCCGACACAGCACGTTCACGGG CGCTACCCAAGCATATGGCG
Downstream 100 bases:
>100_bases ACGTCGCCGCCCATGCCATGCAACGCGCGCACGCCGCGCTGACCGACCTGCGCCCGCAGCCGGACGACATCACCGCCGAT GCACTGGCGGGGTTGTCGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 427; Mature: 426
Protein sequence:
>427_residues MSALSPLLGHLQQQQLTLLERYAQTRALSDRLAAPLSAEDAMVQSMPDASPSKWHLAHTTWFFERFVLQADPAYRVFDPA WDFLFNSYYQSVGPMHARARRGVLSRPSLQQVRDYRAAVDMQMQQRLRDGLLDAQACTIVQLGIQHEQQHQELLLTDIKH ALWSNPLQPAYRDLPTPPAAVASPLRWHARDEQIVQIGAAAWPQADSFAYDNESPRHRVLVGAHALGSRVVTNAEFQHFI DDGGYRSAGAWLSDGWAMVQAQGWQHPLYWDADGREFTLHGWRTRDPHAPVCHLSLFEADAFARWAGARLPTEAEWEQAA TGVPVQGNFVDTDALHPRGAEAVDTGMQQLFGDVWEWTGSAYLPYPGFTPWPGSLGEYNGKFMNAQWVLRGGSCASPASH LRASYRNFFSSDARWQFAGVRLAKDLP
Sequences:
>Translated_427_residues MSALSPLLGHLQQQQLTLLERYAQTRALSDRLAAPLSAEDAMVQSMPDASPSKWHLAHTTWFFERFVLQADPAYRVFDPA WDFLFNSYYQSVGPMHARARRGVLSRPSLQQVRDYRAAVDMQMQQRLRDGLLDAQACTIVQLGIQHEQQHQELLLTDIKH ALWSNPLQPAYRDLPTPPAAVASPLRWHARDEQIVQIGAAAWPQADSFAYDNESPRHRVLVGAHALGSRVVTNAEFQHFI DDGGYRSAGAWLSDGWAMVQAQGWQHPLYWDADGREFTLHGWRTRDPHAPVCHLSLFEADAFARWAGARLPTEAEWEQAA TGVPVQGNFVDTDALHPRGAEAVDTGMQQLFGDVWEWTGSAYLPYPGFTPWPGSLGEYNGKFMNAQWVLRGGSCASPASH LRASYRNFFSSDARWQFAGVRLAKDLP >Mature_426_residues SALSPLLGHLQQQQLTLLERYAQTRALSDRLAAPLSAEDAMVQSMPDASPSKWHLAHTTWFFERFVLQADPAYRVFDPAW DFLFNSYYQSVGPMHARARRGVLSRPSLQQVRDYRAAVDMQMQQRLRDGLLDAQACTIVQLGIQHEQQHQELLLTDIKHA LWSNPLQPAYRDLPTPPAAVASPLRWHARDEQIVQIGAAAWPQADSFAYDNESPRHRVLVGAHALGSRVVTNAEFQHFID DGGYRSAGAWLSDGWAMVQAQGWQHPLYWDADGREFTLHGWRTRDPHAPVCHLSLFEADAFARWAGARLPTEAEWEQAAT GVPVQGNFVDTDALHPRGAEAVDTGMQQLFGDVWEWTGSAYLPYPGFTPWPGSLGEYNGKFMNAQWVLRGGSCASPASHL RASYRNFFSSDARWQFAGVRLAKDLP
Specific function: Unknown
COG id: COG1262
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI257470975, Length=180, Percent_Identity=28.8888888888889, Blast_Score=69, Evalue=8e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47999; Mature: 47868
Theoretical pI: Translated: 6.46; Mature: 6.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSALSPLLGHLQQQQLTLLERYAQTRALSDRLAAPLSAEDAMVQSMPDASPSKWHLAHTT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCEEEHHHH WFFERFVLQADPAYRVFDPAWDFLFNSYYQSVGPMHARARRGVLSRPSLQQVRDYRAAVD HHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCHHHHHHHHHHHH MQMQQRLRDGLLDAQACTIVQLGIQHEQQHQELLLTDIKHALWSNPLQPAYRDLPTPPAA HHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCHHH VASPLRWHARDEQIVQIGAAAWPQADSFAYDNESPRHRVLVGAHALGSRVVTNAEFQHFI HHCCHHHCCCCHHHHEECCCCCCCCCCCCCCCCCCCEEEEEEHHHHCCHHHCCHHHHHHH DDGGYRSAGAWLSDGWAMVQAQGWQHPLYWDADGREFTLHGWRTRDPHAPVCHLSLFEAD CCCCCCCCCCCCCCCEEEEEECCCCCCEEECCCCCEEEEECCCCCCCCCCEEEEEEHHHH AFARWAGARLPTEAEWEQAATGVPVQGNFVDTDALHPRGAEAVDTGMQQLFGDVWEWTGS HHHHHHCCCCCCCCCHHHHHCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCC AYLPYPGFTPWPGSLGEYNGKFMNAQWVLRGGSCASPASHLRASYRNFFSSDARWQFAGV EECCCCCCCCCCCCCCCCCCCEECEEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEECE RLAKDLP EHHCCCC >Mature Secondary Structure SALSPLLGHLQQQQLTLLERYAQTRALSDRLAAPLSAEDAMVQSMPDASPSKWHLAHTT CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCEEEHHHH WFFERFVLQADPAYRVFDPAWDFLFNSYYQSVGPMHARARRGVLSRPSLQQVRDYRAAVD HHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCHHHHHHHHHHHH MQMQQRLRDGLLDAQACTIVQLGIQHEQQHQELLLTDIKHALWSNPLQPAYRDLPTPPAA HHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCHHH VASPLRWHARDEQIVQIGAAAWPQADSFAYDNESPRHRVLVGAHALGSRVVTNAEFQHFI HHCCHHHCCCCHHHHEECCCCCCCCCCCCCCCCCCCEEEEEEHHHHCCHHHCCHHHHHHH DDGGYRSAGAWLSDGWAMVQAQGWQHPLYWDADGREFTLHGWRTRDPHAPVCHLSLFEAD CCCCCCCCCCCCCCCEEEEEECCCCCCEEECCCCCEEEEECCCCCCCCCCEEEEEEHHHH AFARWAGARLPTEAEWEQAATGVPVQGNFVDTDALHPRGAEAVDTGMQQLFGDVWEWTGS HHHHHHCCCCCCCCCHHHHHCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCC AYLPYPGFTPWPGSLGEYNGKFMNAQWVLRGGSCASPASHLRASYRNFFSSDARWQFAGV EECCCCCCCCCCCCCCCCCCCEECEEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEECE RLAKDLP EHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA