| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
Click here to switch to the map view.
The map label for this gene is 21240925
Identifier: 21240925
GI number: 21240925
Start: 183490
End: 184254
Strand: Reverse
Name: 21240925
Synonym: XAC0151
Alternate gene names: NA
Gene position: 184254-183490 (Counterclockwise)
Preceding gene: 21240933
Following gene: 21240924
Centisome position: 3.56
GC content: 59.74
Gene sequence:
>765_bases ATGGCCTTGAGATGTCTAGGAAATCCTGGGCGTATCATAGGCCCACATGGCGATTCCGACTACCGGAACTACTATGGCGT GAATCCGATCAGTCACATCGCGCAGAACTACGCGCATCTTGCACATGACCGCCAGCCTCCGGAAGTCCGCATCGATCTCA AATCCTTGGGACTGGACCCCAGGCAGCTGGAGCGCAATGGGCTGGAACTGGGTCCTGCAAAGACCTTCAACATCCTTGAC CTTGGCAAGGATGGCTATGGCATGGTCCAGCTCAGGAACGCTGGCACACGCGGCGTCAGTTCTCCCAATCTTGCGGCACC GAATGAGCCTGGACGCGCATTGACGCCTGCAGAAGCGGGGCACCCGGACCACGCCATGCATCAGCAGATCCGGAGCAAGG TAGAGCAGCTGGACGCCGCCAATGGCCGCACGTTCGACGCAACCAGTGAGCGGATGACCGCGAGTCTGCTGACGCTAGCC AAAGACAATGGGCTAACCCGGGTGGATCACGTGCTGCTCAGCGAAAAGACCAGAGACTCGCCCGCTGCGCAAACCCTGTT TGTAGTTCAAGGCGATCCAAAGGATCCGGCAATGCTTCGCGCCCATATGCCGACGGCTGATGCAGCGCAGCGGCCTGTTC AAGAGAGCTTTACGCAATTGGAGTCCGTCAACCAGCGGCTAGCGCAGGAGCGCACGCAAGACTTGGCAGTGGAACAGCAG CGCTCGCAGGAGCAACAACATCGCGGCCCCGTTCCGTCGCGTTGA
Upstream 100 bases:
>100_bases ACCTTGAACCCACGATCGGTCACTTGCCGGACCGCCTCGATCTTGAACTCATCCGTATACCGCTTACTGCTCATGGACAC CTCCGAATCAGCCATTTTCC
Downstream 100 bases:
>100_bases GGCGATGAGGTGCACGCACCTATCATTATCAAATGGTTGGCAACCCCATCATTCTCAACAAGAAACGGGGAATGATGCCC AAATGAATCTGACTCCGGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 254; Mature: 253
Protein sequence:
>254_residues MALRCLGNPGRIIGPHGDSDYRNYYGVNPISHIAQNYAHLAHDRQPPEVRIDLKSLGLDPRQLERNGLELGPAKTFNILD LGKDGYGMVQLRNAGTRGVSSPNLAAPNEPGRALTPAEAGHPDHAMHQQIRSKVEQLDAANGRTFDATSERMTASLLTLA KDNGLTRVDHVLLSEKTRDSPAAQTLFVVQGDPKDPAMLRAHMPTADAAQRPVQESFTQLESVNQRLAQERTQDLAVEQQ RSQEQQHRGPVPSR
Sequences:
>Translated_254_residues MALRCLGNPGRIIGPHGDSDYRNYYGVNPISHIAQNYAHLAHDRQPPEVRIDLKSLGLDPRQLERNGLELGPAKTFNILD LGKDGYGMVQLRNAGTRGVSSPNLAAPNEPGRALTPAEAGHPDHAMHQQIRSKVEQLDAANGRTFDATSERMTASLLTLA KDNGLTRVDHVLLSEKTRDSPAAQTLFVVQGDPKDPAMLRAHMPTADAAQRPVQESFTQLESVNQRLAQERTQDLAVEQQ RSQEQQHRGPVPSR >Mature_253_residues ALRCLGNPGRIIGPHGDSDYRNYYGVNPISHIAQNYAHLAHDRQPPEVRIDLKSLGLDPRQLERNGLELGPAKTFNILDL GKDGYGMVQLRNAGTRGVSSPNLAAPNEPGRALTPAEAGHPDHAMHQQIRSKVEQLDAANGRTFDATSERMTASLLTLAK DNGLTRVDHVLLSEKTRDSPAAQTLFVVQGDPKDPAMLRAHMPTADAAQRPVQESFTQLESVNQRLAQERTQDLAVEQQR SQEQQHRGPVPSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27919; Mature: 27787
Theoretical pI: Translated: 7.39; Mature: 7.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALRCLGNPGRIIGPHGDSDYRNYYGVNPISHIAQNYAHLAHDRQPPEVRIDLKSLGLDP CEEEEECCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEHHHHCCCH RQLERNGLELGPAKTFNILDLGKDGYGMVQLRNAGTRGVSSPNLAAPNEPGRALTPAEAG HHHHHCCCCCCCCCEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC HPDHAMHQQIRSKVEQLDAANGRTFDATSERMTASLLTLAKDNGLTRVDHVLLSEKTRDS CCHHHHHHHHHHHHHHHHCCCCCEECCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCC PAAQTLFVVQGDPKDPAMLRAHMPTADAAQRPVQESFTQLESVNQRLAQERTQDLAVEQQ CCCEEEEEEECCCCCHHHEEECCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH RSQEQQHRGPVPSR HHHHHHHCCCCCCC >Mature Secondary Structure ALRCLGNPGRIIGPHGDSDYRNYYGVNPISHIAQNYAHLAHDRQPPEVRIDLKSLGLDP EEEEECCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEHHHHCCCH RQLERNGLELGPAKTFNILDLGKDGYGMVQLRNAGTRGVSSPNLAAPNEPGRALTPAEAG HHHHHCCCCCCCCCEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC HPDHAMHQQIRSKVEQLDAANGRTFDATSERMTASLLTLAKDNGLTRVDHVLLSEKTRDS CCHHHHHHHHHHHHHHHHCCCCCEECCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCC PAAQTLFVVQGDPKDPAMLRAHMPTADAAQRPVQESFTQLESVNQRLAQERTQDLAVEQQ CCCEEEEEEECCCCCHHHEEECCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH RSQEQQHRGPVPSR HHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA