| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is iroN [C]
Identifier: 21240918
GI number: 21240918
Start: 169510
End: 172290
Strand: Direct
Name: iroN [C]
Synonym: XAC0144
Alternate gene names: 21240918
Gene position: 169510-172290 (Clockwise)
Preceding gene: 21240916
Following gene: 21240919
Centisome position: 3.28
GC content: 65.16
Gene sequence:
>2781_bases ATGCAATTTCGGACCACCAGCCGGAAGACACCGGTTACCTTGCTTGCGCTGTCGATCGGCCTGGCGCTGAGCGGCCAGGC TGCCGCACAAGACGCCGCCCAATCGCCTGCCGAGCCCGCCGTCGACCTGGACACTGTCACGGTGACCGGTTACCGCGCCA GCGTCGAGAAGGCCCTGGACATCAAGCGCGGCGAAGCCGGCGTGGTCGATGCCATCGTGGCCGAAGACATCGGCAAGTTC CCCGACCTCAACCTGGCCGAGTCGCTGCAGCGCATTCCCGGCGTGGTGATCACCCGCGACGCCGGCGAAGGCCGCGCCAT CACGGTGCGTGGCCTGGGCCCGGAATTCACCCGCGTCCGCATCAACGGCATGGAAGCGCTCACCACCGTGGGCGCCGGCG ACCAGAGCGGCGGCACCAACCGCGGCCGCGGCTTCGACTTCAACGTCTTCGCCTCGGACCTGTTCTCGCAGCTGATCGCC CGCAAGACGGCCTCGGCCGATGTGGAAGAGGGCTCGCTGGGGGCCACCGTCGACCTGCGCACCGCGCGCCCGTTCGACTA CAGCGGCTTTACGTTTGCCGCCAGTGGCCAGGCGGCCTACAACGCCATGGCCGAGAAGGCCAATCCGCGCGTTGCCGCGT TGATCGCCAATACCTGGGCCGACAACACCTTCGGCGCCTTGCTGTCGGTGGCCTACACCGAGCGGCAGGTGCTGGAAGAA GGCTCCAACACCGGCCGCTGGGCCAATGGGACGAGCAACGGCAACTTCAGTGCGGCATCGCCATTTGCGGCCGCACGCTC GGCGGACGTGTACCACCCGCGCTTCCCGCGTTATGTGCAGATGGAACACGACCAGCAGCGCCTGGGCGTGACCGGGTCGT TGCAGTGGAAGCCCACCGACCGCACCACCATCTCGCTGGACGCGCTGTACTCCAAGATCGACGCCACGCGCGATGAGCAC TACATCGAGGCCATCTCCTTCAGCCGCGGTCGCGACAGCGGCACGCCGCGGCGCGCCGATCGCGACGGCAAGCCGGCCAC CATCGTGCGCAATGGCGAGATCCGCAACAACGCGCTGGTGTACGGCGAATTCGACAACGTCGATATCCGCTCGGAGAACC GCCACGACGAGTGGAACACCGAGTTCAAGCAGGTCAGCCTGGATCTGGAGCACCGCTTCAGCGATGCTTTCTCCGTGTCC GGCCGTGTCGGTACCTCGCGCTCGGCGCACGAGAACCCGGTGCAGACCACCATCATCATGGACAAGTACGACGTCGACGG GTACAGCTACGACTATCGCGGCAACAATCGCGCGCCGGTGCTGAACTACGGCATCGACCCGACCAATCCTGCCGGGTGGG AACTGGCCGAAATCCGCCTGCGTCCGCAGACGGTGGACAACGATTTCGATACGGCGCAGATCGACTTCAACTGGAACATC AGCCCCGGGTTCCGCCTCAAGGGTGGCGTGCTGGCCAAGGACTACACCTTCAGCACGGTTGAGCTGCGTCGCGCCAGCGA AATTGCGGTGCCGACCTTCGCCGATGGCACCCGTATCGTGCCGACGGACCTGACCGAGCAGGCCGGCCTCAAGGGCATCA ACGGCAGCCCGTCCAACTGGATCGTTCCCAACCTGGATGCAGTGGCCAACCAGCTCGGCATCTACAGCAACGCCGGCACC TACGCCGTGGCGCCGCGCGCCAACAACACCCGCAGCGTCGAAGAAAAGGACCGCGGCGTCTGGTTGATGGGCGAGTTCTC CACCGACCTGGGCTCCATCCCGCTGTCGGGTAATGTCGGCGTGCGCTATGTGCGCACCGAGCAGGAGTCCACCGGCTATG CGTTGATCAACAACGCGCCGGCGCTGACCACGGTGGGCCGCAAGTACAACAACACGCTGCCCTCGTTCAACCTGGTGGCC GAGCTCGCACCCGACCTGCTGCTGCGCCTGGGCGCGGCCAAGGTGATGTCGCGCCCCGGCCTGGGCAGCCTCACGCCCGG TGTGACCGTGGCGGTGGCCGGTGGCGCACGCACCGTGTCCGGCGGCAACCCGGATCTGGATCCGATCGAAGCCACCAATG TCGATCTTGGCCTGGAGTGGTACTTCAACGAGGGCGCGATGCTCGGTGTCGGCGTGTTCTACAAGGACATCGAAAGTTTC ATCCAGACCGCACGCGAAGTGCGCCCGTATGCCAGCAGTGGCTTGCCGGCTTCCTTGCTGGATGGCACCGGCGCCAGCAT CAACGACGACTTCACCTTCAGCATTCCGTTGAATACACCCGGTGGCGAGTTGAAGGGCGTGGAAGCGAACTATGTCCAGC CCTTTACGTTCCTGCCGGGCAAGTGGGCCAATCTGGGAGTGCAACTGAACTACACCTGGGTGGATTCGCAGATCCAGTAC CTGTCCAGCACCGGCGCACCGGTGATGAAGAACGACCTGACCGGGCTGTCGCGCTCGTCGTGGAATGCGACCTTGTTCTA CGAGGGCGAGTCCTTCGCCGGCCGCATCTCGGCCACCAATCGCGACGATTACCTGACCCAGGCCCCCGGCACGGAAGCGG GATTCAACGTCGATGGCGTGCACGGCATGAGCGGCACCACCATGATCGACGCCTCGCTGCGCTACAAGATCAGCAAGCAG CTGGAGCTGAGCCTGGAGGGCATCAACCTCACCAACGAAGCGTCCGACGAATGGGTGTGGTCGCCGCAAACCGGCGAGTT GCCGTTGCAGTACACCGAAACCGGCCGCCAGTACTTGCTGGGCCTGCGCTACAAGTTCTAA
Upstream 100 bases:
>100_bases ACGGGACGATTCAGCTGGTAACGTCGTTTTGACCAGCGGTGTCATTGCCGCGTTCAACCCGCTATTTCACATTGTTCATG GACCCTTGGGAGGGGAGGAC
Downstream 100 bases:
>100_bases GTGCAGCCAAGTCGCGCCAAGTGATCTCGCGCCCGCCACGTACATCGCGTAGCGGGCGCGAGATCGACGTTGCAACGCAT CTGTACGACGCACCGCACCC
Product: TonB-dependent receptor
Products: NA
Alternate protein names: Nb-Dependent Receptor; NB-Dependent Receptor Plug; NB-Dependent Outer Membrane Receptor; Nb-Dependent Outer Membrane Receptor Protein; NB-Dependent Receptor Subfamily; Outer Membrane Protein; Outer Membrane Insertion C-Terminal Signal; NB-Dependent Receptor Subfamily Protein; NB Dependent Receptor-Related Protein; Nucleoside Diphosphate Kinase; NB-Dependent Receptor Protein; NB-Dependent Outer Membrane Receptor Protein; NB Dependent Receptor; Peptidase; NB-Dependent Receptor-Like Protein; NB Dependent Receptor Protein; NB Dependent Receptor For Iron Chelates; 50S Ribosomal Protein L; NB-Dependent Outer Membrane Ferripyoverdine Receptor; 1-(5-Phosphoribosyl)-5-; Argininosuccinate Synthase; DEAD/DEAH Box Helicase-Like
Number of amino acids: Translated: 926; Mature: 926
Protein sequence:
>926_residues MQFRTTSRKTPVTLLALSIGLALSGQAAAQDAAQSPAEPAVDLDTVTVTGYRASVEKALDIKRGEAGVVDAIVAEDIGKF PDLNLAESLQRIPGVVITRDAGEGRAITVRGLGPEFTRVRINGMEALTTVGAGDQSGGTNRGRGFDFNVFASDLFSQLIA RKTASADVEEGSLGATVDLRTARPFDYSGFTFAASGQAAYNAMAEKANPRVAALIANTWADNTFGALLSVAYTERQVLEE GSNTGRWANGTSNGNFSAASPFAAARSADVYHPRFPRYVQMEHDQQRLGVTGSLQWKPTDRTTISLDALYSKIDATRDEH YIEAISFSRGRDSGTPRRADRDGKPATIVRNGEIRNNALVYGEFDNVDIRSENRHDEWNTEFKQVSLDLEHRFSDAFSVS GRVGTSRSAHENPVQTTIIMDKYDVDGYSYDYRGNNRAPVLNYGIDPTNPAGWELAEIRLRPQTVDNDFDTAQIDFNWNI SPGFRLKGGVLAKDYTFSTVELRRASEIAVPTFADGTRIVPTDLTEQAGLKGINGSPSNWIVPNLDAVANQLGIYSNAGT YAVAPRANNTRSVEEKDRGVWLMGEFSTDLGSIPLSGNVGVRYVRTEQESTGYALINNAPALTTVGRKYNNTLPSFNLVA ELAPDLLLRLGAAKVMSRPGLGSLTPGVTVAVAGGARTVSGGNPDLDPIEATNVDLGLEWYFNEGAMLGVGVFYKDIESF IQTAREVRPYASSGLPASLLDGTGASINDDFTFSIPLNTPGGELKGVEANYVQPFTFLPGKWANLGVQLNYTWVDSQIQY LSSTGAPVMKNDLTGLSRSSWNATLFYEGESFAGRISATNRDDYLTQAPGTEAGFNVDGVHGMSGTTMIDASLRYKISKQ LELSLEGINLTNEASDEWVWSPQTGELPLQYTETGRQYLLGLRYKF
Sequences:
>Translated_926_residues MQFRTTSRKTPVTLLALSIGLALSGQAAAQDAAQSPAEPAVDLDTVTVTGYRASVEKALDIKRGEAGVVDAIVAEDIGKF PDLNLAESLQRIPGVVITRDAGEGRAITVRGLGPEFTRVRINGMEALTTVGAGDQSGGTNRGRGFDFNVFASDLFSQLIA RKTASADVEEGSLGATVDLRTARPFDYSGFTFAASGQAAYNAMAEKANPRVAALIANTWADNTFGALLSVAYTERQVLEE GSNTGRWANGTSNGNFSAASPFAAARSADVYHPRFPRYVQMEHDQQRLGVTGSLQWKPTDRTTISLDALYSKIDATRDEH YIEAISFSRGRDSGTPRRADRDGKPATIVRNGEIRNNALVYGEFDNVDIRSENRHDEWNTEFKQVSLDLEHRFSDAFSVS GRVGTSRSAHENPVQTTIIMDKYDVDGYSYDYRGNNRAPVLNYGIDPTNPAGWELAEIRLRPQTVDNDFDTAQIDFNWNI SPGFRLKGGVLAKDYTFSTVELRRASEIAVPTFADGTRIVPTDLTEQAGLKGINGSPSNWIVPNLDAVANQLGIYSNAGT YAVAPRANNTRSVEEKDRGVWLMGEFSTDLGSIPLSGNVGVRYVRTEQESTGYALINNAPALTTVGRKYNNTLPSFNLVA ELAPDLLLRLGAAKVMSRPGLGSLTPGVTVAVAGGARTVSGGNPDLDPIEATNVDLGLEWYFNEGAMLGVGVFYKDIESF IQTAREVRPYASSGLPASLLDGTGASINDDFTFSIPLNTPGGELKGVEANYVQPFTFLPGKWANLGVQLNYTWVDSQIQY LSSTGAPVMKNDLTGLSRSSWNATLFYEGESFAGRISATNRDDYLTQAPGTEAGFNVDGVHGMSGTTMIDASLRYKISKQ LELSLEGINLTNEASDEWVWSPQTGELPLQYTETGRQYLLGLRYKF >Mature_926_residues MQFRTTSRKTPVTLLALSIGLALSGQAAAQDAAQSPAEPAVDLDTVTVTGYRASVEKALDIKRGEAGVVDAIVAEDIGKF PDLNLAESLQRIPGVVITRDAGEGRAITVRGLGPEFTRVRINGMEALTTVGAGDQSGGTNRGRGFDFNVFASDLFSQLIA RKTASADVEEGSLGATVDLRTARPFDYSGFTFAASGQAAYNAMAEKANPRVAALIANTWADNTFGALLSVAYTERQVLEE GSNTGRWANGTSNGNFSAASPFAAARSADVYHPRFPRYVQMEHDQQRLGVTGSLQWKPTDRTTISLDALYSKIDATRDEH YIEAISFSRGRDSGTPRRADRDGKPATIVRNGEIRNNALVYGEFDNVDIRSENRHDEWNTEFKQVSLDLEHRFSDAFSVS GRVGTSRSAHENPVQTTIIMDKYDVDGYSYDYRGNNRAPVLNYGIDPTNPAGWELAEIRLRPQTVDNDFDTAQIDFNWNI SPGFRLKGGVLAKDYTFSTVELRRASEIAVPTFADGTRIVPTDLTEQAGLKGINGSPSNWIVPNLDAVANQLGIYSNAGT YAVAPRANNTRSVEEKDRGVWLMGEFSTDLGSIPLSGNVGVRYVRTEQESTGYALINNAPALTTVGRKYNNTLPSFNLVA ELAPDLLLRLGAAKVMSRPGLGSLTPGVTVAVAGGARTVSGGNPDLDPIEATNVDLGLEWYFNEGAMLGVGVFYKDIESF IQTAREVRPYASSGLPASLLDGTGASINDDFTFSIPLNTPGGELKGVEANYVQPFTFLPGKWANLGVQLNYTWVDSQIQY LSSTGAPVMKNDLTGLSRSSWNATLFYEGESFAGRISATNRDDYLTQAPGTEAGFNVDGVHGMSGTTMIDASLRYKISKQ LELSLEGINLTNEASDEWVWSPQTGELPLQYTETGRQYLLGLRYKF
Specific function: Not Yet Known. Postulated To Participate In Iron Transport. Outer Membrane Receptor For Colicins Ia And Ib. [C]
COG id: COG1629
COG function: function code P; Outer membrane receptor proteins, mostly Fe transport
Gene ontology:
Cell location: Outer Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 100300; Mature: 100300
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: PS01156 TONB_DEPENDENT_REC_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQFRTTSRKTPVTLLALSIGLALSGQAAAQDAAQSPAEPAVDLDTVTVTGYRASVEKALD CCCCCCCCCCCEEEEEEECCEEECCCHHHHHHHCCCCCCCCCCEEEEEECCHHHHHHHHH IKRGEAGVVDAIVAEDIGKFPDLNLAESLQRIPGVVITRDAGEGRAITVRGLGPEFTRVR CCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHCCCEEEEECCCCCCEEEEECCCCCEEEEE INGMEALTTVGAGDQSGGTNRGRGFDFNVFASDLFSQLIARKTASADVEEGSLGATVDLR ECCCEEEEEECCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEE TARPFDYSGFTFAASGQAAYNAMAEKANPRVAALIANTWADNTFGALLSVAYTERQVLEE ECCCCCCCCEEEEECCCHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHC GSNTGRWANGTSNGNFSAASPFAAARSADVYHPRFPRYVQMEHDQQRLGVTGSLQWKPTD CCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCEEEECCCHHHCCCCEEEEECCCC RTTISLDALYSKIDATRDEHYIEAISFSRGRDSGTPRRADRDGKPATIVRNGEIRNNALV CCEEEHHHHHHHHHCCCCHHHEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEE YGEFDNVDIRSENRHDEWNTEFKQVSLDLEHRFSDAFSVSGRVGTSRSAHENPVQTTIIM EECCCCEEECCCCCCCCCCCCEEEEEEEHHHHCCCCEEECCCCCCCCCCCCCCCEEEEEE DKYDVDGYSYDYRGNNRAPVLNYGIDPTNPAGWELAEIRLRPQTVDNDFDTAQIDFNWNI EEECCCCEEEECCCCCCCCEEEECCCCCCCCCCEEEEEEECCCCCCCCCCEEEEEEEECC SPGFRLKGGVLAKDYTFSTVELRRASEIAVPTFADGTRIVPTDLTEQAGLKGINGSPSNW CCCCEECCCEEECCCEEEEEEEECCCCCCCCEECCCCEECCCCCHHHHCCCCCCCCCCCC IVPNLDAVANQLGIYSNAGTYAVAPRANNTRSVEEKDRGVWLMGEFSTDLGSIPLSGNVG CCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCHHHCCCEEEEEECCCCCCCCCCCCCCC VRYVRTEQESTGYALINNAPALTTVGRKYNNTLPSFNLVAELAPDLLLRLGAAKVMSRPG EEEEEECCCCCCEEEEECCCCEEECCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC LGSLTPGVTVAVAGGARTVSGGNPDLDPIEATNVDLGLEWYFNEGAMLGVGVFYKDIESF CCCCCCCEEEEEECCCEEECCCCCCCCCCCCCCCEEEEEEEECCCCEEEHHHHHHHHHHH IQTAREVRPYASSGLPASLLDGTGASINDDFTFSIPLNTPGGELKGVEANYVQPFTFLPG HHHHHHHCCCCCCCCCHHHHCCCCCCCCCCEEEEEECCCCCCCEECCCCCCCCCEEECCC KWANLGVQLNYTWVDSQIQYLSSTGAPVMKNDLTGLSRSSWNATLFYEGESFAGRISATN CCCCEEEEEEEEEECCHHHHHHCCCCCCHHHCCCCCCCCCCCEEEEECCCCCEEEEECCC RDDYLTQAPGTEAGFNVDGVHGMSGTTMIDASLRYKISKQLELSLEGINLTNEASDEWVW CCCCEECCCCCCCCCCCCCCCCCCCCEEEECEEEEEEEEEEEEEEECCCCCCCCCCCEEE SPQTGELPLQYTETGRQYLLGLRYKF CCCCCCCCEEEHHCCCEEEEEEEECC >Mature Secondary Structure MQFRTTSRKTPVTLLALSIGLALSGQAAAQDAAQSPAEPAVDLDTVTVTGYRASVEKALD CCCCCCCCCCCEEEEEEECCEEECCCHHHHHHHCCCCCCCCCCEEEEEECCHHHHHHHHH IKRGEAGVVDAIVAEDIGKFPDLNLAESLQRIPGVVITRDAGEGRAITVRGLGPEFTRVR CCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHCCCEEEEECCCCCCEEEEECCCCCEEEEE INGMEALTTVGAGDQSGGTNRGRGFDFNVFASDLFSQLIARKTASADVEEGSLGATVDLR ECCCEEEEEECCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEE TARPFDYSGFTFAASGQAAYNAMAEKANPRVAALIANTWADNTFGALLSVAYTERQVLEE ECCCCCCCCEEEEECCCHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHC GSNTGRWANGTSNGNFSAASPFAAARSADVYHPRFPRYVQMEHDQQRLGVTGSLQWKPTD CCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCEEEECCCHHHCCCCEEEEECCCC RTTISLDALYSKIDATRDEHYIEAISFSRGRDSGTPRRADRDGKPATIVRNGEIRNNALV CCEEEHHHHHHHHHCCCCHHHEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEE YGEFDNVDIRSENRHDEWNTEFKQVSLDLEHRFSDAFSVSGRVGTSRSAHENPVQTTIIM EECCCCEEECCCCCCCCCCCCEEEEEEEHHHHCCCCEEECCCCCCCCCCCCCCCEEEEEE DKYDVDGYSYDYRGNNRAPVLNYGIDPTNPAGWELAEIRLRPQTVDNDFDTAQIDFNWNI EEECCCCEEEECCCCCCCCEEEECCCCCCCCCCEEEEEEECCCCCCCCCCEEEEEEEECC SPGFRLKGGVLAKDYTFSTVELRRASEIAVPTFADGTRIVPTDLTEQAGLKGINGSPSNW CCCCEECCCEEECCCEEEEEEEECCCCCCCCEECCCCEECCCCCHHHHCCCCCCCCCCCC IVPNLDAVANQLGIYSNAGTYAVAPRANNTRSVEEKDRGVWLMGEFSTDLGSIPLSGNVG CCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCHHHCCCEEEEEECCCCCCCCCCCCCCC VRYVRTEQESTGYALINNAPALTTVGRKYNNTLPSFNLVAELAPDLLLRLGAAKVMSRPG EEEEEECCCCCCEEEEECCCCEEECCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC LGSLTPGVTVAVAGGARTVSGGNPDLDPIEATNVDLGLEWYFNEGAMLGVGVFYKDIESF CCCCCCCEEEEEECCCEEECCCCCCCCCCCCCCCEEEEEEEECCCCEEEHHHHHHHHHHH IQTAREVRPYASSGLPASLLDGTGASINDDFTFSIPLNTPGGELKGVEANYVQPFTFLPG HHHHHHHCCCCCCCCCHHHHCCCCCCCCCCEEEEEECCCCCCCEECCCCCCCCCEEECCC KWANLGVQLNYTWVDSQIQYLSSTGAPVMKNDLTGLSRSSWNATLFYEGESFAGRISATN CCCCEEEEEEEEEECCHHHHHHCCCCCCHHHCCCCCCCCCCCEEEEECCCCCEEEEECCC RDDYLTQAPGTEAGFNVDGVHGMSGTTMIDASLRYKISKQLELSLEGINLTNEASDEWVW CCCCEECCCCCCCCCCCCCCCCCCCCEEEECEEEEEEEEEEEEEEECCCCCCCCCCCEEE SPQTGELPLQYTETGRQYLLGLRYKF CCCCCCCCEEEHHCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA