| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is kdgK [H]
Identifier: 21240917
GI number: 21240917
Start: 168202
End: 169224
Strand: Reverse
Name: kdgK [H]
Synonym: XAC0143
Alternate gene names: 21240917
Gene position: 169224-168202 (Counterclockwise)
Preceding gene: 21240922
Following gene: 21240914
Centisome position: 3.27
GC content: 68.23
Gene sequence:
>1023_bases ATGAGCCGTGCCAGTATCCTGTGTTTTGGTGAGTTATTGCTGCGCCTGGGGGCGCCTGGCCATGAACTGCTGCTGCAGCA GCCTCGGCTGGATGTGCACTGCGGCGGCGCGGAGGCCAACGTCGGCGTCTCGCTGGCGCATTTCGGCCATGACGTGGCCA TGGTCAGCACGGTGGCGGACAACCCGTTGGGCGCCGCGGTACTGGGCGAGCTGCGCCGGCACGACGTGGATACCCGCCAT GTACGGCGCGTGGATGGCCGCATGGGCCTGTATTTCCTGACCACCGGGGCGATCCATCGCCCCAGCGAGGTGATCTACGA CCGCGCCGACTCGGCCTTTGCGCTGGCACCGGCCGATGCCTACGACTGGCCGCGTCTGCTGGAAGGCGTGCAGTGGCTGC ACCTGTCCGGGGTGAGCCCGGCATTGGGCGCGGAGGTGGCGCAGGCCACGTTGGCGGCGGCACGTGCTGCGCGTGCGGCC GGGGTGAAGGTGTCGTTCGACGGCAACTACCGGCCCAAGTTGTGGCAACGCTGGCAGGGCGATGCGCGCGGCATCCTGCA TCAGCTGTTTGCCTGTGCGGATGTGGTGTTTGCAGATTACCGCGACATCGGCGTGGTACTGGGCGGGGAGTTCGCGCAGG ACACGCTGGAAGCGCGCGTGGAAGCGGCCGCGCAGCACGCCTTCGCTGCATTCCCGCAGCTGCAGTTGATGGCCTGCACG CAACGCGTGGCGCATCACGTGGACCACCACAGCCTGGGCGCGATGCTGGTGCCGCGCCAGGGCGCGGTGGCGCGTGCGCC CAGCGAAGAGCTCACACCCATCATCGACCGCATTGGCGGCGGCGACGCGTTTGCGGCCGGCGTGCTGCACGGCCTGATCG AAGGATGGTCGCTGGAGGATACGGTGCGCTTCGGCCTGGCCGCCGGCTGTTTGAAGCATTCGATTCCGGGCGATTTCAAT CCGCTGTCGGTGGCCGACGTGCAGGCCTGCGTGGGCGATGCGCGGTTCGATGTGAGGCGGTGA
Upstream 100 bases:
>100_bases CAGCCGGCATTTCGCGCCGGCTAGAATGACACCGATGGCCATCTCAGTGCGCGACGGCGCCCCCACCCGTCACGTACCAC CCAGCCGAGGTAATTGCCGT
Downstream 100 bases:
>100_bases ATCGGGAATTGGGAATCGTAAGAGCTGACAGCGCTGGTTTTCGGCACTGGATTCGAATGTTTTGCCGATAGCACGGCGCA TCCGGAACTGGCGCGCGATT
Product: 2-keto-3-deoxygluconate kinase
Products: NA
Alternate protein names: 2-keto-3-deoxygluconokinase; 3-deoxy-2-oxo-D-gluconate kinase; KDG kinase [H]
Number of amino acids: Translated: 340; Mature: 339
Protein sequence:
>340_residues MSRASILCFGELLLRLGAPGHELLLQQPRLDVHCGGAEANVGVSLAHFGHDVAMVSTVADNPLGAAVLGELRRHDVDTRH VRRVDGRMGLYFLTTGAIHRPSEVIYDRADSAFALAPADAYDWPRLLEGVQWLHLSGVSPALGAEVAQATLAAARAARAA GVKVSFDGNYRPKLWQRWQGDARGILHQLFACADVVFADYRDIGVVLGGEFAQDTLEARVEAAAQHAFAAFPQLQLMACT QRVAHHVDHHSLGAMLVPRQGAVARAPSEELTPIIDRIGGGDAFAAGVLHGLIEGWSLEDTVRFGLAAGCLKHSIPGDFN PLSVADVQACVGDARFDVRR
Sequences:
>Translated_340_residues MSRASILCFGELLLRLGAPGHELLLQQPRLDVHCGGAEANVGVSLAHFGHDVAMVSTVADNPLGAAVLGELRRHDVDTRH VRRVDGRMGLYFLTTGAIHRPSEVIYDRADSAFALAPADAYDWPRLLEGVQWLHLSGVSPALGAEVAQATLAAARAARAA GVKVSFDGNYRPKLWQRWQGDARGILHQLFACADVVFADYRDIGVVLGGEFAQDTLEARVEAAAQHAFAAFPQLQLMACT QRVAHHVDHHSLGAMLVPRQGAVARAPSEELTPIIDRIGGGDAFAAGVLHGLIEGWSLEDTVRFGLAAGCLKHSIPGDFN PLSVADVQACVGDARFDVRR >Mature_339_residues SRASILCFGELLLRLGAPGHELLLQQPRLDVHCGGAEANVGVSLAHFGHDVAMVSTVADNPLGAAVLGELRRHDVDTRHV RRVDGRMGLYFLTTGAIHRPSEVIYDRADSAFALAPADAYDWPRLLEGVQWLHLSGVSPALGAEVAQATLAAARAARAAG VKVSFDGNYRPKLWQRWQGDARGILHQLFACADVVFADYRDIGVVLGGEFAQDTLEARVEAAAQHAFAAFPQLQLMACTQ RVAHHVDHHSLGAMLVPRQGAVARAPSEELTPIIDRIGGGDAFAAGVLHGLIEGWSLEDTVRFGLAAGCLKHSIPGDFNP LSVADVQACVGDARFDVRR
Specific function: Unknown
COG id: COG0524
COG function: function code G; Sugar kinases, ribokinase family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the carbohydrate kinase pfkB family [H]
Homologues:
Organism=Escherichia coli, GI87082281, Length=312, Percent_Identity=25, Blast_Score=75, Evalue=5e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011611 - InterPro: IPR002173 [H]
Pfam domain/function: PF00294 PfkB [H]
EC number: =2.7.1.45 [H]
Molecular weight: Translated: 36417; Mature: 36286
Theoretical pI: Translated: 6.50; Mature: 6.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRASILCFGELLLRLGAPGHELLLQQPRLDVHCGGAEANVGVSLAHFGHDVAMVSTVAD CCCCHHHHHHHHHHHHCCCCHHHHHCCCCCEEEECCCCCCCCEEHHHHCCCHHHHHHHCC NPLGAAVLGELRRHDVDTRHVRRVDGRMGLYFLTTGAIHRPSEVIYDRADSAFALAPADA CCCCHHHHHHHHHCCCCHHHHHHHCCCCEEEEEECCCCCCCHHHHHHCCCCCEEECCCCC YDWPRLLEGVQWLHLSGVSPALGAEVAQATLAAARAARAAGVKVSFDGNYRPKLWQRWQG CCHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHCC DARGILHQLFACADVVFADYRDIGVVLGGEFAQDTLEARVEAAAQHAFAAFPQLQLMACT HHHHHHHHHHHHHHHHHHHHHHCEEEECCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH QRVAHHVDHHSLGAMLVPRQGAVARAPSEELTPIIDRIGGGDAFAAGVLHGLIEGWSLED HHHHHHCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHH TVRFGLAAGCLKHSIPGDFNPLSVADVQACVGDARFDVRR HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCC >Mature Secondary Structure SRASILCFGELLLRLGAPGHELLLQQPRLDVHCGGAEANVGVSLAHFGHDVAMVSTVAD CCCHHHHHHHHHHHHCCCCHHHHHCCCCCEEEECCCCCCCCEEHHHHCCCHHHHHHHCC NPLGAAVLGELRRHDVDTRHVRRVDGRMGLYFLTTGAIHRPSEVIYDRADSAFALAPADA CCCCHHHHHHHHHCCCCHHHHHHHCCCCEEEEEECCCCCCCHHHHHHCCCCCEEECCCCC YDWPRLLEGVQWLHLSGVSPALGAEVAQATLAAARAARAAGVKVSFDGNYRPKLWQRWQG CCHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHCC DARGILHQLFACADVVFADYRDIGVVLGGEFAQDTLEARVEAAAQHAFAAFPQLQLMACT HHHHHHHHHHHHHHHHHHHHHHCEEEECCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH QRVAHHVDHHSLGAMLVPRQGAVARAPSEELTPIIDRIGGGDAFAAGVLHGLIEGWSLED HHHHHHCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHH TVRFGLAAGCLKHSIPGDFNPLSVADVQACVGDARFDVRR HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8760912; 9384377 [H]