| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21240915
Identifier: 21240915
GI number: 21240915
Start: 166390
End: 167598
Strand: Direct
Name: 21240915
Synonym: XAC0141
Alternate gene names: NA
Gene position: 166390-167598 (Clockwise)
Preceding gene: 21240912
Following gene: 21240916
Centisome position: 3.21
GC content: 64.68
Gene sequence:
>1209_bases TTGATCATCCATCCCAAAGTGCGCGGCTTCATCTGCACCACCACGCATCCGCTTGGCTGCGAGCGCAATGTGCTCGAGCA GATTGCCGCAACGCGTGCGCGTGGCGTACGCACCGACGGCCCCAAGAAAGTGCTGGTGATCGGCGCGTCCAGCGGCTACG GCCTGGCCTCGCGCATCACCGCTGCCTTCGGGTTCGGTGCGGACACGCTGGGCGTGTTCTTCGAAAAGCCCGGCACCGCC AGCAAGGCCGGCACGGCCGGCTGGTACAACTCGGCCGCGTTCGACAAACATGCCAAGGCGGCCGGGCTGTATAGCAAGTC GATCAATGGCGACGCGTTTTCCGATGCCGCGCGCGAGAAGGTGATCGAGCTGATCAAGACCGAGATGGGCGGGCAGGTCG ACCTGATGGTGTATTCGCTGGCCTCGCCGGTGCGCAAGCTGCCGGGCAGCGGCGAAGTCAAGCGCTCGGCGCTCAAGCCG ATCGGGCAGACCTATACCGCCACCGCCATCGACACCAACAAGGACACCATCATCCAGGCCTCGATCGAGCCGGCCAGCGC GCAGGAGATCGAAGATACCGTCACCGTGATGGGCGGGCAGGATTGGGAATTGTGGATCGACGCGCTGGAAGGCGCCGGCG TGCTCGCCGATGGCGCGCGCAGCGTGGCCTTCAGCTATATCGGCACCGAAATCACCTGGCCGATCTACTGGCATGGCGCA CTCGGCAAGGCCAAGGTCGACCTGGACCACACCGCGCAGCGCTTGAATGCGCGCCTGGCCAGGCGCGGCGGCGGCGCCAA TGTGGCGGTGCTCAAGTCGGTGGTCACCCAGGCCAGCGCGGCCATTCCGGTGATGCCGCTGTACATCTCCATGGTCTACA AGATCATGAAAGAAAAGGGTCTGCACGAAGGCACCATCGAGCAGCTCGACCGCCTGTTCCGCGAGCGCCTGTACCGCGAA GACGGCCAGCCGGCGCAGGTGGACGACGAAAACCGTCTGCGCCTGGACGACTGGGAATTGCGCGACGACGTGCAGGACGC CTGCAAGGCGCTATGGCCGCAGGTCACGACCGAGAACCTGTTCGAGCTCACCGACTACGCCGGCTACAAGCACGAGTTCC TCAAGCTGTTCGGCTTCGAGCGCACCGACGTGGATTACGACGCCGACGTGGCGACGGATGTCAGCTTCGATTGCATCGAG TTGGGCTGA
Upstream 100 bases:
>100_bases CATGCGCTTCCATACAGCGGCGTGTGTTACGCATCAGGCTGTTTCGTGCGCGCCACACGCACTAAGATGCCGCCAGCATC TTGCTGACCAGGAGTCCACG
Downstream 100 bases:
>100_bases GAATCGGGAATCGGGAATTGCAAGAGCGGTGGCTTGATGCAGCACTGATCTTGGGCGGACATCAAGACTTCGCGATAAGG ACAACCGGTACGTTGCCGGT
Product: trans-2-enoyl-CoA reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 402; Mature: 402
Protein sequence:
>402_residues MIIHPKVRGFICTTTHPLGCERNVLEQIAATRARGVRTDGPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTA SKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAFSDAAREKVIELIKTEMGGQVDLMVYSLASPVRKLPGSGEVKRSALKP IGQTYTATAIDTNKDTIIQASIEPASAQEIEDTVTVMGGQDWELWIDALEGAGVLADGARSVAFSYIGTEITWPIYWHGA LGKAKVDLDHTAQRLNARLARRGGGANVAVLKSVVTQASAAIPVMPLYISMVYKIMKEKGLHEGTIEQLDRLFRERLYRE DGQPAQVDDENRLRLDDWELRDDVQDACKALWPQVTTENLFELTDYAGYKHEFLKLFGFERTDVDYDADVATDVSFDCIE LG
Sequences:
>Translated_402_residues MIIHPKVRGFICTTTHPLGCERNVLEQIAATRARGVRTDGPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTA SKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAFSDAAREKVIELIKTEMGGQVDLMVYSLASPVRKLPGSGEVKRSALKP IGQTYTATAIDTNKDTIIQASIEPASAQEIEDTVTVMGGQDWELWIDALEGAGVLADGARSVAFSYIGTEITWPIYWHGA LGKAKVDLDHTAQRLNARLARRGGGANVAVLKSVVTQASAAIPVMPLYISMVYKIMKEKGLHEGTIEQLDRLFRERLYRE DGQPAQVDDENRLRLDDWELRDDVQDACKALWPQVTTENLFELTDYAGYKHEFLKLFGFERTDVDYDADVATDVSFDCIE LG >Mature_402_residues MIIHPKVRGFICTTTHPLGCERNVLEQIAATRARGVRTDGPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTA SKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAFSDAAREKVIELIKTEMGGQVDLMVYSLASPVRKLPGSGEVKRSALKP IGQTYTATAIDTNKDTIIQASIEPASAQEIEDTVTVMGGQDWELWIDALEGAGVLADGARSVAFSYIGTEITWPIYWHGA LGKAKVDLDHTAQRLNARLARRGGGANVAVLKSVVTQASAAIPVMPLYISMVYKIMKEKGLHEGTIEQLDRLFRERLYRE DGQPAQVDDENRLRLDDWELRDDVQDACKALWPQVTTENLFELTDYAGYKHEFLKLFGFERTDVDYDADVATDVSFDCIE LG
Specific function: Probable reductase [H]
COG id: COG3007
COG function: function code S; Uncharacterized paraquat-inducible protein B
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TER reductase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010758 [H]
Pfam domain/function: PF07055 scADH [H]
EC number: NA
Molecular weight: Translated: 43849; Mature: 43849
Theoretical pI: Translated: 5.19; Mature: 5.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIIHPKVRGFICTTTHPLGCERNVLEQIAATRARGVRTDGPKKVLVIGASSGYGLASRIT CCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHH AAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAFSDAAREK HHHCCCCHHHHHEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHH VIELIKTEMGGQVDLMVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQA HHHHHHHHCCCEEEEHHHHHHHHHHHCCCCCCHHHHHHHHCCCCEEEEEEECCCCEEEEE SIEPASAQEIEDTVTVMGGQDWELWIDALEGAGVLADGARSVAFSYIGTEITWPIYWHGA ECCCCCHHHHHHHEEEECCCCHHHHHHHHCCCCEEECCHHHHHHHHHCCEEEEEEEEECC LGKAKVDLDHTAQRLNARLARRGGGANVAVLKSVVTQASAAIPVMPLYISMVYKIMKEKG CCCEEECHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC LHEGTIEQLDRLFRERLYREDGQPAQVDDENRLRLDDWELRDDVQDACKALWPQVTTENL CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHCCCCCHHHH FELTDYAGYKHEFLKLFGFERTDVDYDADVATDVSFDCIELG HHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECC >Mature Secondary Structure MIIHPKVRGFICTTTHPLGCERNVLEQIAATRARGVRTDGPKKVLVIGASSGYGLASRIT CCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHH AAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAFSDAAREK HHHCCCCHHHHHEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHH VIELIKTEMGGQVDLMVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQA HHHHHHHHCCCEEEEHHHHHHHHHHHCCCCCCHHHHHHHHCCCCEEEEEEECCCCEEEEE SIEPASAQEIEDTVTVMGGQDWELWIDALEGAGVLADGARSVAFSYIGTEITWPIYWHGA ECCCCCHHHHHHHEEEECCCCHHHHHHHHCCCCEEECCHHHHHHHHHCCEEEEEEEEECC LGKAKVDLDHTAQRLNARLARRGGGANVAVLKSVVTQASAAIPVMPLYISMVYKIMKEKG CCCEEECHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC LHEGTIEQLDRLFRERLYREDGQPAQVDDENRLRLDDWELRDDVQDACKALWPQVTTENL CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHCCCCCHHHH FELTDYAGYKHEFLKLFGFERTDVDYDADVATDVSFDCIELG HHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA