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The map label for this gene is yqfA [H]

Identifier: 21240853

GI number: 21240853

Start: 98737

End: 99393

Strand: Direct

Name: yqfA [H]

Synonym: XAC0079

Alternate gene names: 21240853

Gene position: 98737-99393 (Clockwise)

Preceding gene: 21240850

Following gene: 21240854

Centisome position: 1.91

GC content: 65.75

Gene sequence:

>657_bases
GTGCCTGCCAACGTCACTGCTCCGCATTACAAGTCCGTCTCTGCCCGCCGCGCCGATATCGCGGTACATGCCGCCGGCCT
GTTGCTGGCCATCGTCGGCGGCGCCTGGATGGTGGTGCGCGCGCACGCCAACCAGACCATGCTGCTGGCCACCTGCATCT
ATGCGCTGGGGCTGCTGGTGATGTTCGCCTGTTCGGCGGCCTACAACTTCGCCCCGCCGCAGCGCCAGCCGATGCTGCGC
AAGTTCGATCACGCCGGCATCTTCGTCATGATTGCCGGCTCCTACACGCCGTTTTTCCTGGTGGCGCTGGACGGCAGCTG
GCGCTGGGTGATGATCCTCAGCGTCTGGTGCGTGGCCTTGTTTGGCGTATTCGCCAAGCTGTGCCTGCCCGGCATCGCCA
AGGGCTTCTGGGTGGCGATCTATCTGCTGCTGGGCTGGGCCGGCATCGTGGTGATCAACCAGATGATCGCCGGGCTGGAC
AGCGCGGTGCTGTGGCTCATCGTTGCCGGCGGCGCCTTTTACACCGTGGGCGTCGCGTTCTACGTGCGCAAATCCATGGT
CTACAACCGCGCCATCTGGCACGCCCATGTGCTGGGCGGCGCATTGTCGCACTGGTGCGCCATCTGGCTGTGCCTGCGGC
CGTTGGGCGAGGGGTGA

Upstream 100 bases:

>100_bases
CACTGAGCGGATTCAGCAAGCCGGGTATCCTGTCGCCCCCACAGCGTCACGGCTGCCTTGCACGCTGGGGGATCCCCCAC
ACCGAAGAAACGCCGTGCCC

Downstream 100 bases:

>100_bases
CCACGCAGTGTGGCGTCCTCGGGCCGGCCGCTTGCCTGGCCCGAAGTGATACTTTAGTGTCACTAGCATGCGCACCGAAC
TTGTCACCACGCTCAAGCGT

Product: hemolysin III

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 218; Mature: 217

Protein sequence:

>218_residues
MPANVTAPHYKSVSARRADIAVHAAGLLLAIVGGAWMVVRAHANQTMLLATCIYALGLLVMFACSAAYNFAPPQRQPMLR
KFDHAGIFVMIAGSYTPFFLVALDGSWRWVMILSVWCVALFGVFAKLCLPGIAKGFWVAIYLLLGWAGIVVINQMIAGLD
SAVLWLIVAGGAFYTVGVAFYVRKSMVYNRAIWHAHVLGGALSHWCAIWLCLRPLGEG

Sequences:

>Translated_218_residues
MPANVTAPHYKSVSARRADIAVHAAGLLLAIVGGAWMVVRAHANQTMLLATCIYALGLLVMFACSAAYNFAPPQRQPMLR
KFDHAGIFVMIAGSYTPFFLVALDGSWRWVMILSVWCVALFGVFAKLCLPGIAKGFWVAIYLLLGWAGIVVINQMIAGLD
SAVLWLIVAGGAFYTVGVAFYVRKSMVYNRAIWHAHVLGGALSHWCAIWLCLRPLGEG
>Mature_217_residues
PANVTAPHYKSVSARRADIAVHAAGLLLAIVGGAWMVVRAHANQTMLLATCIYALGLLVMFACSAAYNFAPPQRQPMLRK
FDHAGIFVMIAGSYTPFFLVALDGSWRWVMILSVWCVALFGVFAKLCLPGIAKGFWVAIYLLLGWAGIVVINQMIAGLDS
AVLWLIVAGGAFYTVGVAFYVRKSMVYNRAIWHAHVLGGALSHWCAIWLCLRPLGEG

Specific function: Unknown

COG id: COG1272

COG function: function code R; Predicted membrane protein, hemolysin III homolog

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0073 (Hly-III) family [H]

Homologues:

Organism=Escherichia coli, GI1789266, Length=203, Percent_Identity=37.9310344827586, Blast_Score=135, Evalue=3e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004254
- InterPro:   IPR005744 [H]

Pfam domain/function: PF03006 HlyIII [H]

EC number: NA

Molecular weight: Translated: 23714; Mature: 23582

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPANVTAPHYKSVSARRADIAVHAAGLLLAIVGGAWMVVRAHANQTMLLATCIYALGLLV
CCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHCCHHEEEEECCCCHHHHHHHHHHHHHHH
MFACSAAYNFAPPQRQPMLRKFDHAGIFVMIAGSYTPFFLVALDGSWRWVMILSVWCVAL
HHHHHHHCCCCCCCCCHHHHHHCCCCEEEEEECCCCCEEEEEECCCCHHHHHHHHHHHHH
FGVFAKLCLPGIAKGFWVAIYLLLGWAGIVVINQMIAGLDSAVLWLIVAGGAFYTVGVAF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
YVRKSMVYNRAIWHAHVLGGALSHWCAIWLCLRPLGEG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
PANVTAPHYKSVSARRADIAVHAAGLLLAIVGGAWMVVRAHANQTMLLATCIYALGLLV
CCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHCCHHEEEEECCCCHHHHHHHHHHHHHHH
MFACSAAYNFAPPQRQPMLRKFDHAGIFVMIAGSYTPFFLVALDGSWRWVMILSVWCVAL
HHHHHHHCCCCCCCCCHHHHHHCCCCEEEEEECCCCCEEEEEECCCCHHHHHHHHHHHHH
FGVFAKLCLPGIAKGFWVAIYLLLGWAGIVVINQMIAGLDSAVLWLIVAGGAFYTVGVAF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
YVRKSMVYNRAIWHAHVLGGALSHWCAIWLCLRPLGEG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]