Click here to switch to the map view.

The map label for this gene is 21240839

Identifier: 21240839

GI number: 21240839

Start: 78079

End: 78666

Strand: Reverse

Name: 21240839

Synonym: XAC0065

Alternate gene names: NA

Gene position: 78666-78079 (Counterclockwise)

Preceding gene: 21240840

Following gene: 21240838

Centisome position: 1.52

GC content: 64.29

Gene sequence:

>588_bases
ATGTCCAATAGCTTCATCGGCGAAGTGCGCGCGTTTCCCTACAACTTCGCGCCCGAGGGCTGGCTCGATTGCATGGGGCA
GACGGTCAGCATCAATCAGTATCAGGCGCTGTTCGGGGTGATCGGTTTTGCTTACGGAGGCGACAAGCAGACTACGTTCG
GGTTGCCGGACCTGCGCGGCCGCGCGGTCACCGGACAGGGACAGGGGCCCGGCCTGAGCAACTACACCATCGGCCAGTTG
CAGGGTACCGATTCGGTGGCCCTGGTGTCGTCGACGCAGTTGCCCGCCCACACGCACTCCATTACCACCATGTTCCTGCC
CCCCGCGACCGCGCCGGGTGCTGCGGTCAACACGCCGAGTTCGAGCTCGTATCTGTCGCGCTTGCTCAATCCGACGACCT
CGCCGCCGACCTCGTACAAGGCGTATGCACCGGCAACGACCACACCCATGGTGCAGTTGTCGCCTAACGCGCTGGCCCCC
TTTCCGTCGGGCTCGCAGGCGGTGCAGGCGCACGAGAATCGTCAGCCGTTCACGACGATCCGCTATTGCATCTGCGCTAC
CGACGGCATCTACCCGCCAAGGCCGTGA

Upstream 100 bases:

>100_bases
GCACGACAACCACATGGCGACGCAGACGCTGAGCTATCTGATCTGCTTGAACGGGTTCTACCCGCAGCGGCCGTGATCGG
CTATCGCAAAGGAGTTCGAC

Downstream 100 bases:

>100_bases
TACTGCTGCGCTTCGCCTGTCCTGCGTCCCTGGTGGCACGGGGCATGGCGATCCGTGCCGAGCACGAGGCGGACTTGCCC
ACGCTGCGCGCGCTGTTCCG

Product: microcystin dependent protein

Products: NA

Alternate protein names: Phage Tail Collar; Phage Tail Collar Domain-Containing Protein; Tail Collar Domain-Containing Protein; Microcystin Dependent Protein; Microcystin-Dependent Protein; Phage Tail Collar Domain Protein; Phage Tail Collar Domain Family; Microcystin Dependent Protein MdpB; Cell Wall/Surface Repeat Protein; Microcystin Dependent; Microcystin-Dependent Protein-Like Protein; Phenylacrylic Acid Decarboxylase

Number of amino acids: Translated: 195; Mature: 194

Protein sequence:

>195_residues
MSNSFIGEVRAFPYNFAPEGWLDCMGQTVSINQYQALFGVIGFAYGGDKQTTFGLPDLRGRAVTGQGQGPGLSNYTIGQL
QGTDSVALVSSTQLPAHTHSITTMFLPPATAPGAAVNTPSSSSYLSRLLNPTTSPPTSYKAYAPATTTPMVQLSPNALAP
FPSGSQAVQAHENRQPFTTIRYCICATDGIYPPRP

Sequences:

>Translated_195_residues
MSNSFIGEVRAFPYNFAPEGWLDCMGQTVSINQYQALFGVIGFAYGGDKQTTFGLPDLRGRAVTGQGQGPGLSNYTIGQL
QGTDSVALVSSTQLPAHTHSITTMFLPPATAPGAAVNTPSSSSYLSRLLNPTTSPPTSYKAYAPATTTPMVQLSPNALAP
FPSGSQAVQAHENRQPFTTIRYCICATDGIYPPRP
>Mature_194_residues
SNSFIGEVRAFPYNFAPEGWLDCMGQTVSINQYQALFGVIGFAYGGDKQTTFGLPDLRGRAVTGQGQGPGLSNYTIGQLQ
GTDSVALVSSTQLPAHTHSITTMFLPPATAPGAAVNTPSSSSYLSRLLNPTTSPPTSYKAYAPATTTPMVQLSPNALAPF
PSGSQAVQAHENRQPFTTIRYCICATDGIYPPRP

Specific function: Unknown

COG id: COG4675

COG function: function code S; Microcystin-dependent protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20623; Mature: 20492

Theoretical pI: Translated: 8.05; Mature: 8.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNSFIGEVRAFPYNFAPEGWLDCMGQTVSINQYQALFGVIGFAYGGDKQTTFGLPDLRG
CCCCCCCCEEECCCCCCCCHHHHHCCCEEECHHHHHHHHHHHHEECCCCCEEECCCCCCC
RAVTGQGQGPGLSNYTIGQLQGTDSVALVSSTQLPAHTHSITTMFLPPATAPGAAVNTPS
EEEECCCCCCCCCCEEEEEECCCCCEEEEECCCCCCCCCEEEEEEECCCCCCCCEECCCC
SSSYLSRLLNPTTSPPTSYKAYAPATTTPMVQLSPNALAPFPSGSQAVQAHENRQPFTTI
CHHHHHHHHCCCCCCCCCEEEECCCCCCCEEEECCCCCCCCCCCCHHHHHHCCCCCHHHE
RYCICATDGIYPPRP
EEEEEECCCCCCCCC
>Mature Secondary Structure 
SNSFIGEVRAFPYNFAPEGWLDCMGQTVSINQYQALFGVIGFAYGGDKQTTFGLPDLRG
CCCCCCCEEECCCCCCCCHHHHHCCCEEECHHHHHHHHHHHHEECCCCCEEECCCCCCC
RAVTGQGQGPGLSNYTIGQLQGTDSVALVSSTQLPAHTHSITTMFLPPATAPGAAVNTPS
EEEECCCCCCCCCCEEEEEECCCCCEEEEECCCCCCCCCEEEEEEECCCCCCCCEECCCC
SSSYLSRLLNPTTSPPTSYKAYAPATTTPMVQLSPNALAPFPSGSQAVQAHENRQPFTTI
CHHHHHHHHCCCCCCCCCEEEECCCCCCCEEEECCCCCCCCCCCCHHHHHHCCCCCHHHE
RYCICATDGIYPPRP
EEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA