| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
Click here to switch to the map view.
The map label for this gene is egl [H]
Identifier: 21240804
GI number: 21240804
Start: 34548
End: 35621
Strand: Reverse
Name: egl [H]
Synonym: XAC0030
Alternate gene names: 21240804
Gene position: 35621-34548 (Counterclockwise)
Preceding gene: 21240806
Following gene: 21240803
Centisome position: 0.69
GC content: 63.04
Gene sequence:
>1074_bases ATGTTCCGCACTCCACCGTACTTTCCCCGCCTGCGCATCGCCGCGCTCGCGTTGACCTTGCTCGCCGCCGGTCCGTTGGC CCAGGCCAAGGAGCCGCCCGGCCCCAGGAGGGAAACCGCCGGCCTGAAGTATGTTGGCGTCAATCTGTCCGGTGCCGAGT TCAACTCGCGCAAGAAACCCGGCACCTTGTTCAAGGACTACACCTATCCTGCCGCCTCGGACTTCAGCTATTTCGCCGGC AAGGGCATGAATACGATCCGATTGCCGTTCCTGTGGGAACGCGTGCAGCCCGAGCTCAATGGCCCGCTGGACCAGGCCCA ATTGGGGCTGATCAAGAAGTCGCTCGAGGCAGCCAAGGCCAACAAGCAATACCTGATCCTGGATCTGCACAACTATGCCA CGTACAGCGGCAAGCGCATCGGCACCAGCGACGTGCCGGCCGGCGCGTTGGCCGATCTGTGGCGCCGGCTGGCGCTGGAG TTCAAGGACGACAAGGCGGTGATCTTCGGGCTGATGAACGAGCCCAATGGCATTTCCGCGCCCGACTGGGCCAATGCCGC GCAGGGGACGATCACTGCGATCCGCAAGACCGGCGCGAAGAATCTGATCCTGGTGCCGGGCACCGCCTACACCGGCGCAC ACAGCTGGCGCAGCACCAGCTACGGCGTCTCCAACGCAAAGGCGCTGGAAATCCTCAAGGACCCGGGTAACAACCTTGCC TTCGAAGCGCATCAATACCTGGATAAGGACTACAGCGGCACCAAGCCGGTATGCACCAGCGATTCGGTAGGCCAAGAAAA GCTGCAGGGCTTCACCTCGTGGCTGCGCGAGAACAAGCAGAAGGGCTTCCTGGGCGAATTCGCCACGGCCAACAATCCGG TCTGCGACAAGGCGCTGGAAGGCATGCTGACCTACATGGAAAAGAACAGCGACGTGTGGCTGGGCTGGACCTGGTGGGCG GCGGGCGCGTGGTGGAAGCCGGACTATCCCTTCACCGTGCAACCGGGCAAGGACGGCAGCGACAAGCCGCAGATGGCGAT CCTGAGCAAGTACGCACGCCGCGCCGGCAAGTAA
Upstream 100 bases:
>100_bases GCGAGCTCATAGGCTCACGCAGCAGCAGATGGCGCTGCACCATCTGCGCTGGCCGTGCCCTCCCCCGCGGCTGCCCACGT CGATGCCGAAGGAGACTTCC
Downstream 100 bases:
>100_bases GCAGCGGCGCAGGCAGAAGGTGGTCGCAACCAGTGTTGCGGCCACCTTTTTTATGTCCATTGCGGTGCACCGCGTTGGAG GACAGGCTGCTTCGGAGAAG
Product: cellulase
Products: NA
Alternate protein names: Cellulase; Endo-1,4-beta-glucanase [H]
Number of amino acids: Translated: 357; Mature: 357
Protein sequence:
>357_residues MFRTPPYFPRLRIAALALTLLAAGPLAQAKEPPGPRRETAGLKYVGVNLSGAEFNSRKKPGTLFKDYTYPAASDFSYFAG KGMNTIRLPFLWERVQPELNGPLDQAQLGLIKKSLEAAKANKQYLILDLHNYATYSGKRIGTSDVPAGALADLWRRLALE FKDDKAVIFGLMNEPNGISAPDWANAAQGTITAIRKTGAKNLILVPGTAYTGAHSWRSTSYGVSNAKALEILKDPGNNLA FEAHQYLDKDYSGTKPVCTSDSVGQEKLQGFTSWLRENKQKGFLGEFATANNPVCDKALEGMLTYMEKNSDVWLGWTWWA AGAWWKPDYPFTVQPGKDGSDKPQMAILSKYARRAGK
Sequences:
>Translated_357_residues MFRTPPYFPRLRIAALALTLLAAGPLAQAKEPPGPRRETAGLKYVGVNLSGAEFNSRKKPGTLFKDYTYPAASDFSYFAG KGMNTIRLPFLWERVQPELNGPLDQAQLGLIKKSLEAAKANKQYLILDLHNYATYSGKRIGTSDVPAGALADLWRRLALE FKDDKAVIFGLMNEPNGISAPDWANAAQGTITAIRKTGAKNLILVPGTAYTGAHSWRSTSYGVSNAKALEILKDPGNNLA FEAHQYLDKDYSGTKPVCTSDSVGQEKLQGFTSWLRENKQKGFLGEFATANNPVCDKALEGMLTYMEKNSDVWLGWTWWA AGAWWKPDYPFTVQPGKDGSDKPQMAILSKYARRAGK >Mature_357_residues MFRTPPYFPRLRIAALALTLLAAGPLAQAKEPPGPRRETAGLKYVGVNLSGAEFNSRKKPGTLFKDYTYPAASDFSYFAG KGMNTIRLPFLWERVQPELNGPLDQAQLGLIKKSLEAAKANKQYLILDLHNYATYSGKRIGTSDVPAGALADLWRRLALE FKDDKAVIFGLMNEPNGISAPDWANAAQGTITAIRKTGAKNLILVPGTAYTGAHSWRSTSYGVSNAKALEILKDPGNNLA FEAHQYLDKDYSGTKPVCTSDSVGQEKLQGFTSWLRENKQKGFLGEFATANNPVCDKALEGMLTYMEKNSDVWLGWTWWA AGAWWKPDYPFTVQPGKDGSDKPQMAILSKYARRAGK
Specific function: Unknown
COG id: COG2730
COG function: function code G; Endoglucanase
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 5 (cellulase A) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001547 - InterPro: IPR018087 - InterPro: IPR017853 - InterPro: IPR013781 [H]
Pfam domain/function: PF00150 Cellulase [H]
EC number: =3.2.1.4 [H]
Molecular weight: Translated: 39309; Mature: 39309
Theoretical pI: Translated: 9.90; Mature: 9.90
Prosite motif: PS00659 GLYCOSYL_HYDROL_F5
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFRTPPYFPRLRIAALALTLLAAGPLAQAKEPPGPRRETAGLKYVGVNLSGAEFNSRKKP CCCCCCCCHHHHHHHHHHHHHHCCCHHHCCCCCCCCCHHCCEEEEEEEECCCCCCCCCCC GTLFKDYTYPAASDFSYFAGKGMNTIRLPFLWERVQPELNGPLDQAQLGLIKKSLEAAKA CCCEECCCCCCCCCCHHHHCCCCCEEECHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHC NKQYLILDLHNYATYSGKRIGTSDVPAGALADLWRRLALEFKDDKAVIFGLMNEPNGISA CCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCC PDWANAAQGTITAIRKTGAKNLILVPGTAYTGAHSWRSTSYGVSNAKALEILKDPGNNLA CCCCCCCCCHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCE FEAHQYLDKDYSGTKPVCTSDSVGQEKLQGFTSWLRENKQKGFLGEFATANNPVCDKALE EHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHH GMLTYMEKNSDVWLGWTWWAAGAWWKPDYPFTVQPGKDGSDKPQMAILSKYARRAGK HHHHHHHCCCCEEEEEEHCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure MFRTPPYFPRLRIAALALTLLAAGPLAQAKEPPGPRRETAGLKYVGVNLSGAEFNSRKKP CCCCCCCCHHHHHHHHHHHHHHCCCHHHCCCCCCCCCHHCCEEEEEEEECCCCCCCCCCC GTLFKDYTYPAASDFSYFAGKGMNTIRLPFLWERVQPELNGPLDQAQLGLIKKSLEAAKA CCCEECCCCCCCCCCHHHHCCCCCEEECHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHC NKQYLILDLHNYATYSGKRIGTSDVPAGALADLWRRLALEFKDDKAVIFGLMNEPNGISA CCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCC PDWANAAQGTITAIRKTGAKNLILVPGTAYTGAHSWRSTSYGVSNAKALEILKDPGNNLA CCCCCCCCCHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCE FEAHQYLDKDYSGTKPVCTSDSVGQEKLQGFTSWLRENKQKGFLGEFATANNPVCDKALE EHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHH GMLTYMEKNSDVWLGWTWWAAGAWWKPDYPFTVQPGKDGSDKPQMAILSKYARRAGK HHHHHHHCCCCEEEEEEHCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 1735723; 2738021; 2195024 [H]