| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is egl [H]
Identifier: 21240802
GI number: 21240802
Start: 30948
End: 32081
Strand: Reverse
Name: egl [H]
Synonym: XAC0028
Alternate gene names: 21240802
Gene position: 32081-30948 (Counterclockwise)
Preceding gene: 21240803
Following gene: 21240801
Centisome position: 0.62
GC content: 61.9
Gene sequence:
>1134_bases ATGTCTGCTGTCTGTTTTTCGTTGCGCGCGCTACTGCGCTCCACGCTGCTTTTCATCGTGTTTGGCAGCCTGCCGTTGGC CCACGCGCAGACGCGCGCGCTCACCTATGCCGGCGTCAATCTGTCCGGTGCCGAATTCGCATCTTCCAAAAAGCCCGGAG TCCTCAACAAGGACTATATGTACGCAGCGGCCAGCGATTACACCTATTTCGCCGGTGTCGGCATGAATACCATCCGCCTG CCGATCCTGTGGGAACGGCTGCAGCCCACCGCGAGCGGCGAGCTGGATCCGGCCCAACTCGCGTTGCTGCAACAGGCCGT GGCACGCGCCAAGGCAGCCGGCATGTATCTGGTCATCGATATCCATAACTACGCCAAGTATTACGGCTACAAGATCGGCA GCCCGGAAGTACCGGTGGCCACGTTTACCGATCTATGGCGTCGTCTCGCACTGGCGTTCAACAGCGACAACGCGGTGATG TTCGGGCTGATGAATGAGCCCAACAATATTTCGGCCAGCGACTGGGCCGGCGCAGCGCAGGCCGCCATCGATGCCATCCG CAGGACCGGTGCCAATAACCTGATTCTGGTGCCCGGCGAATTGTGGACCGGCGCGCATAGTTGGTATTCCACCACGAACG ATGGCTACTCCAACGCCACCGCGCTGACGTCCATCTACGACCCGCTCGATCGCTACGCCTTCGAAGTGCATCAGTATCTG GATGCCGATTCCAGCGGCACCAGCAGCACCTGTGTCAGCAGCACCATTGGCGCCGAGCGCCTGCGCAACTTCACGCAGTG GCTGCGCACCAACCGCAAGCGCGGCTTTCTGGCCGAATTCGGCACCGCCAACAATGCGGTGTGCAACCAGGCGCTGCAAG GCATGTTGGCGTACATGGAAACCAATGCAGATGTGTGGCTGGGTTGGACCTGGTGGGCGGCCGGTTCGTGGTGGAACCTC AGCTACGCTTACAGCGTGCACCCCAACAAGGACGGCACCGACAAGCCGCAGATGGCGATCCTGTCGCCGCAGGCCACACT CGCCACGCGTGCACCGGTCGCTGCTGCCGCGGCGCGCACTTCCGCTGCATCGACCTCCGCAACAAGCACATCCGTTGCAC GCACGGCACGCTGA
Upstream 100 bases:
>100_bases CAATTGGGCACGGCTGATGCATTGATTCAGACCGATGCAGCGCATCGCGCGCAACGCGCATGCACTTAGCTGCATCTCCC CCCGTCTGAGGAGTTGTGTC
Downstream 100 bases:
>100_bases TGCCAGACAAGCCGCCGTAAGGCGGCTTTGTTTTACGCACGCAGCGCGCGGGCAAACGGCGTTGGCACGATGGGATGCAC ACGCCGATTACTGCGATTCC
Product: cellulase
Products: NA
Alternate protein names: Cellulase; Endo-1,4-beta-glucanase [H]
Number of amino acids: Translated: 377; Mature: 376
Protein sequence:
>377_residues MSAVCFSLRALLRSTLLFIVFGSLPLAHAQTRALTYAGVNLSGAEFASSKKPGVLNKDYMYAAASDYTYFAGVGMNTIRL PILWERLQPTASGELDPAQLALLQQAVARAKAAGMYLVIDIHNYAKYYGYKIGSPEVPVATFTDLWRRLALAFNSDNAVM FGLMNEPNNISASDWAGAAQAAIDAIRRTGANNLILVPGELWTGAHSWYSTTNDGYSNATALTSIYDPLDRYAFEVHQYL DADSSGTSSTCVSSTIGAERLRNFTQWLRTNRKRGFLAEFGTANNAVCNQALQGMLAYMETNADVWLGWTWWAAGSWWNL SYAYSVHPNKDGTDKPQMAILSPQATLATRAPVAAAAARTSAASTSATSTSVARTAR
Sequences:
>Translated_377_residues MSAVCFSLRALLRSTLLFIVFGSLPLAHAQTRALTYAGVNLSGAEFASSKKPGVLNKDYMYAAASDYTYFAGVGMNTIRL PILWERLQPTASGELDPAQLALLQQAVARAKAAGMYLVIDIHNYAKYYGYKIGSPEVPVATFTDLWRRLALAFNSDNAVM FGLMNEPNNISASDWAGAAQAAIDAIRRTGANNLILVPGELWTGAHSWYSTTNDGYSNATALTSIYDPLDRYAFEVHQYL DADSSGTSSTCVSSTIGAERLRNFTQWLRTNRKRGFLAEFGTANNAVCNQALQGMLAYMETNADVWLGWTWWAAGSWWNL SYAYSVHPNKDGTDKPQMAILSPQATLATRAPVAAAAARTSAASTSATSTSVARTAR >Mature_376_residues SAVCFSLRALLRSTLLFIVFGSLPLAHAQTRALTYAGVNLSGAEFASSKKPGVLNKDYMYAAASDYTYFAGVGMNTIRLP ILWERLQPTASGELDPAQLALLQQAVARAKAAGMYLVIDIHNYAKYYGYKIGSPEVPVATFTDLWRRLALAFNSDNAVMF GLMNEPNNISASDWAGAAQAAIDAIRRTGANNLILVPGELWTGAHSWYSTTNDGYSNATALTSIYDPLDRYAFEVHQYLD ADSSGTSSTCVSSTIGAERLRNFTQWLRTNRKRGFLAEFGTANNAVCNQALQGMLAYMETNADVWLGWTWWAAGSWWNLS YAYSVHPNKDGTDKPQMAILSPQATLATRAPVAAAAARTSAASTSATSTSVARTAR
Specific function: Unknown
COG id: COG2730
COG function: function code G; Endoglucanase
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 5 (cellulase A) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001547 - InterPro: IPR018087 - InterPro: IPR017853 - InterPro: IPR013781 [H]
Pfam domain/function: PF00150 Cellulase [H]
EC number: =3.2.1.4 [H]
Molecular weight: Translated: 40873; Mature: 40742
Theoretical pI: Translated: 8.67; Mature: 8.67
Prosite motif: PS00659 GLYCOSYL_HYDROL_F5
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAVCFSLRALLRSTLLFIVFGSLPLAHAQTRALTYAGVNLSGAEFASSKKPGVLNKDYM CCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHEEEEECCCCCCHHHCCCCCCCCCCCCEE YAAASDYTYFAGVGMNTIRLPILWERLQPTASGELDPAQLALLQQAVARAKAAGMYLVID EEECCCCEEEEECCCCEEEHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEEE IHNYAKYYGYKIGSPEVPVATFTDLWRRLALAFNSDNAVMFGLMNEPNNISASDWAGAAQ ECHHHHHHCEECCCCCCCHHHHHHHHHHHHHEECCCCEEEEEEECCCCCCCCHHHHHHHH AAIDAIRRTGANNLILVPGELWTGAHSWYSTTNDGYSNATALTSIYDPLDRYAFEVHQYL HHHHHHHHCCCCCEEEECCCCCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH DADSSGTSSTCVSSTIGAERLRNFTQWLRTNRKRGFLAEFGTANNAVCNQALQGMLAYME CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCHHHHHHHHHHHHHHHC TNADVWLGWTWWAAGSWWNLSYAYSVHPNKDGTDKPQMAILSPQATLATRAPVAAAAART CCCCEEEEEEEECCCCEEEEEEEEEECCCCCCCCCCCEEEECCCHHHHHCCCHHHHHHHH SAASTSATSTSVARTAR CCCCCCCCCHHHHHCCC >Mature Secondary Structure SAVCFSLRALLRSTLLFIVFGSLPLAHAQTRALTYAGVNLSGAEFASSKKPGVLNKDYM CHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHEEEEECCCCCCHHHCCCCCCCCCCCCEE YAAASDYTYFAGVGMNTIRLPILWERLQPTASGELDPAQLALLQQAVARAKAAGMYLVID EEECCCCEEEEECCCCEEEHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEEE IHNYAKYYGYKIGSPEVPVATFTDLWRRLALAFNSDNAVMFGLMNEPNNISASDWAGAAQ ECHHHHHHCEECCCCCCCHHHHHHHHHHHHHEECCCCEEEEEEECCCCCCCCHHHHHHHH AAIDAIRRTGANNLILVPGELWTGAHSWYSTTNDGYSNATALTSIYDPLDRYAFEVHQYL HHHHHHHHCCCCCEEEECCCCCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH DADSSGTSSTCVSSTIGAERLRNFTQWLRTNRKRGFLAEFGTANNAVCNQALQGMLAYME CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCHHHHHHHHHHHHHHHC TNADVWLGWTWWAAGSWWNLSYAYSVHPNKDGTDKPQMAILSPQATLATRAPVAAAAART CCCCEEEEEEEECCCCEEEEEEEEEECCCCCCCCCCCEEEECCCHHHHHCCCHHHHHHHH SAASTSATSTSVARTAR CCCCCCCCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1735723; 2738021; 2195024 [H]