Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21228754

Identifier: 21228754

GI number: 21228754

Start: 3167640

End: 3168107

Strand: Reverse

Name: 21228754

Synonym: MM_2652

Alternate gene names: NA

Gene position: 3168107-3167640 (Counterclockwise)

Preceding gene: 21228755

Following gene: 21228751

Centisome position: 77.34

GC content: 44.44

Gene sequence:

>468_bases
ATGCAGATAATAAATACCTCACAGGGAGTAGGAGGCATCCTGAACAGCTTCAAGAGTCTCCTGAACGGAGTAGAAAAGAT
TACATTTGTCGGAACACCGGGTTTCTGCACCCCCTTCGCAGAACTTATGGGTTTTGTTGCCAGGGACAAAAAACTTATTT
TTATTCCCAATATGGACTTTGAAAAAGCCAGGTTAATATCCATGACTCCTGAAGGGATGCAACTTGGAGAACCTATAGAC
GCCCATGCTGATGCTGTTGTCCTGCTCGGCGGGCTTGCGATGCCCAAGATCGGCGTCAGCCCTGACAAAGCTAAGGAGAT
TGCAGAAAAGGTCCTTGAAGGTTCAAATAAACGAAAAATTATCGGGGTCTGTTTCCAGTCAATGTTTATGCAGCAGAAAT
GGGACGAGGTTATCAGTTTTGATTATATCATCAATGCTGACCTGGCAGTTGAGGTTCTTAAAAGCTAA

Upstream 100 bases:

>100_bases
TATTTATGGGAATGTTTCCAATCTTATTGTGAAAGTAGGTACTGTAGAAAGCGGTTAAAAGCAGAATTTTTTATAATAGA
TGAATAAGGAGAAGAGTTTC

Downstream 100 bases:

>100_bases
AAACCTGACACTGGAAAAAGCAGGAGACTACCAGACTGAATAAAAAAGATTAGATCGAAGTCTCAAAATTATTTACAACT
ACTTCTTTTTCCATTTTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 155; Mature: 155

Protein sequence:

>155_residues
MQIINTSQGVGGILNSFKSLLNGVEKITFVGTPGFCTPFAELMGFVARDKKLIFIPNMDFEKARLISMTPEGMQLGEPID
AHADAVVLLGGLAMPKIGVSPDKAKEIAEKVLEGSNKRKIIGVCFQSMFMQQKWDEVISFDYIINADLAVEVLKS

Sequences:

>Translated_155_residues
MQIINTSQGVGGILNSFKSLLNGVEKITFVGTPGFCTPFAELMGFVARDKKLIFIPNMDFEKARLISMTPEGMQLGEPID
AHADAVVLLGGLAMPKIGVSPDKAKEIAEKVLEGSNKRKIIGVCFQSMFMQQKWDEVISFDYIINADLAVEVLKS
>Mature_155_residues
MQIINTSQGVGGILNSFKSLLNGVEKITFVGTPGFCTPFAELMGFVARDKKLIFIPNMDFEKARLISMTPEGMQLGEPID
AHADAVVLLGGLAMPKIGVSPDKAKEIAEKVLEGSNKRKIIGVCFQSMFMQQKWDEVISFDYIINADLAVEVLKS

Specific function: Unknown

COG id: COG4090

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.jannaschii MJ1183 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009183 [H]

Pfam domain/function: PF09897 DUF2124 [H]

EC number: NA

Molecular weight: Translated: 16940; Mature: 16940

Theoretical pI: Translated: 5.24; Mature: 5.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQIINTSQGVGGILNSFKSLLNGVEKITFVGTPGFCTPFAELMGFVARDKKLIFIPNMDF
CCCCCCCCCHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHCCCEEEEECCCCC
EKARLISMTPEGMQLGEPIDAHADAVVLLGGLAMPKIGVSPDKAKEIAEKVLEGSNKRKI
CHHEEEEECCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHH
IGVCFQSMFMQQKWDEVISFDYIINADLAVEVLKS
HHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHCC
>Mature Secondary Structure
MQIINTSQGVGGILNSFKSLLNGVEKITFVGTPGFCTPFAELMGFVARDKKLIFIPNMDF
CCCCCCCCCHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHCCCEEEEECCCCC
EKARLISMTPEGMQLGEPIDAHADAVVLLGGLAMPKIGVSPDKAKEIAEKVLEGSNKRKI
CHHEEEEECCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHH
IGVCFQSMFMQQKWDEVISFDYIINADLAVEVLKS
HHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]