| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21228745
Identifier: 21228745
GI number: 21228745
Start: 3155266
End: 3155847
Strand: Reverse
Name: 21228745
Synonym: MM_2643
Alternate gene names: NA
Gene position: 3155847-3155266 (Counterclockwise)
Preceding gene: 21228746
Following gene: 21228741
Centisome position: 77.04
GC content: 46.05
Gene sequence:
>582_bases TTGAAAGCTCTGATAATTATGGACATGACAAATGACTTCGTATTCGAGAAATATGAACATGAAGGAAAAGAATACGAAGG CAGGCTTGTAGCCCCGCTGGGGAAGACGATAGTCGAGCCTATTGAAGCCCTGGTGAAAAAAGTGGTTAACAGCGGTACAG TCTCTCTTTTCAGGATTTCCAAAGACCACTACGACGCTTTTACAAACCCCGAACTTGAACTGAAGGTGGCAGAGCTTGGA ATTGACGAAGTGTTCATGACAGGGCTTGTCGATGAGGTCTGCATCTACCATAACACTCTCGGATTTCTCGAAAGAGGATT TCGGACAAATGTCGTTAGAGGCTGTACCGCCCCTTTTGACCCGGAAAAGGGAAGAGAATCTCTGGGGGAACTCGATGCCT GTGGCACGAAGATGGTCGATGATATCCCTTCTGACATAGGTGTGATTCTCCTTCTCGAAGACGAACACGATGAGAACTCA GAAGAAATAAAATCCGGAAGCTGGCCTCCCCATAGTATGAAAGGAACTCCAGGAGCCCTTACAATAAAACCTATAAGAGA GGCGCTTGAGAGCAGAAAATAA
Upstream 100 bases:
>100_bases AGGTTAAGTGAGAGAAGGTTAAGTGAGAGATATAGAAAAAAGTAAATAAAAATGCTTGAATTAAGAAAGGACAAAACAGT CAGGGAAAAGTGGTGGAAAT
Downstream 100 bases:
>100_bases GAATGAAAAAATGAAATAAAAAGAAAAGAGGAAAGAGGAACGAAAATAGGGACAGAAAAAATCCGAATAATGTCTTTATT TTTTCTGTTTCAAGCCCTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 193; Mature: 193
Protein sequence:
>193_residues MKALIIMDMTNDFVFEKYEHEGKEYEGRLVAPLGKTIVEPIEALVKKVVNSGTVSLFRISKDHYDAFTNPELELKVAELG IDEVFMTGLVDEVCIYHNTLGFLERGFRTNVVRGCTAPFDPEKGRESLGELDACGTKMVDDIPSDIGVILLLEDEHDENS EEIKSGSWPPHSMKGTPGALTIKPIREALESRK
Sequences:
>Translated_193_residues MKALIIMDMTNDFVFEKYEHEGKEYEGRLVAPLGKTIVEPIEALVKKVVNSGTVSLFRISKDHYDAFTNPELELKVAELG IDEVFMTGLVDEVCIYHNTLGFLERGFRTNVVRGCTAPFDPEKGRESLGELDACGTKMVDDIPSDIGVILLLEDEHDENS EEIKSGSWPPHSMKGTPGALTIKPIREALESRK >Mature_193_residues MKALIIMDMTNDFVFEKYEHEGKEYEGRLVAPLGKTIVEPIEALVKKVVNSGTVSLFRISKDHYDAFTNPELELKVAELG IDEVFMTGLVDEVCIYHNTLGFLERGFRTNVVRGCTAPFDPEKGRESLGELDACGTKMVDDIPSDIGVILLLEDEHDENS EEIKSGSWPPHSMKGTPGALTIKPIREALESRK
Specific function: Unknown
COG id: COG1335
COG function: function code Q; Amidases related to nicotinamidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21513; Mature: 21513
Theoretical pI: Translated: 4.51; Mature: 4.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKALIIMDMTNDFVFEKYEHEGKEYEGRLVAPLGKTIVEPIEALVKKVVNSGTVSLFRIS CCEEEEEECCCCHHHHHHHHCCCCCCCEEECHHHHHHHHHHHHHHHHHHCCCCEEEEEEC KDHYDAFTNPELELKVAELGIDEVFMTGLVDEVCIYHNTLGFLERGFRTNVVRGCTAPFD CHHHCCCCCCCEEEEHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCC PEKGRESLGELDACGTKMVDDIPSDIGVILLLEDEHDENSEEIKSGSWPPHSMKGTPGAL CCHHHHHHHHHHHCCHHHHHHCCCCCEEEEEEECCCCCCHHHHCCCCCCCCCCCCCCCCE TIKPIREALESRK EHHHHHHHHHCCC >Mature Secondary Structure MKALIIMDMTNDFVFEKYEHEGKEYEGRLVAPLGKTIVEPIEALVKKVVNSGTVSLFRIS CCEEEEEECCCCHHHHHHHHCCCCCCCEEECHHHHHHHHHHHHHHHHHHCCCCEEEEEEC KDHYDAFTNPELELKVAELGIDEVFMTGLVDEVCIYHNTLGFLERGFRTNVVRGCTAPFD CHHHCCCCCCCEEEEHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCC PEKGRESLGELDACGTKMVDDIPSDIGVILLLEDEHDENSEEIKSGSWPPHSMKGTPGAL CCHHHHHHHHHHHCCHHHHHHCCCCCEEEEEEECCCCCCHHHHCCCCCCCCCCCCCCCCE TIKPIREALESRK EHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA