Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21228431

Identifier: 21228431

GI number: 21228431

Start: 2787886

End: 2788146

Strand: Direct

Name: 21228431

Synonym: MM_2329

Alternate gene names: NA

Gene position: 2787886-2788146 (Clockwise)

Preceding gene: 21228430

Following gene: 21228432

Centisome position: 68.06

GC content: 41.76

Gene sequence:

>261_bases
ATGGTAAATTTCGAATCCAAAGACAAGAACCGGGCCGTGTTTCTATTAAGTGTTGCCACTTCCGTGGTGCTGATGAGCCT
TTTCCTGCTCGGGACCTTGTTAGCTAATATTTACTCAGGAGAAACATCCTATACTCTGGTAGACGTTGTTATGGGTTGCA
TTTTCGTTTTTATTATTACCATAATTATCTCACTGTCCCTCTGGCCCAGGGTGTTGGACTGGCTTGAAAACAGAGAACAG
GTGAAAAAGTCAGAATTATAA

Upstream 100 bases:

>100_bases
GTTCGGTTTCGGTGACAACCAATTCCCTTCTGATGAAAAGAAGCAGGATTAAGTAAGTTCAGGACTGATTTTATGACTTC
CGCTCAATGTCGGTGATAAT

Downstream 100 bases:

>100_bases
TATTTTACAGGCAGGTGATTTATTTATAAAAAAGTTTTCTGAACGTAATGGTTTATATACCACGGAATTGACCTTATGCC
ATGAATAACGGAAGCATGAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 86; Mature: 86

Protein sequence:

>86_residues
MVNFESKDKNRAVFLLSVATSVVLMSLFLLGTLLANIYSGETSYTLVDVVMGCIFVFIITIIISLSLWPRVLDWLENREQ
VKKSEL

Sequences:

>Translated_86_residues
MVNFESKDKNRAVFLLSVATSVVLMSLFLLGTLLANIYSGETSYTLVDVVMGCIFVFIITIIISLSLWPRVLDWLENREQ
VKKSEL
>Mature_86_residues
MVNFESKDKNRAVFLLSVATSVVLMSLFLLGTLLANIYSGETSYTLVDVVMGCIFVFIITIIISLSLWPRVLDWLENREQ
VKKSEL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9744; Mature: 9744

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVNFESKDKNRAVFLLSVATSVVLMSLFLLGTLLANIYSGETSYTLVDVVMGCIFVFIIT
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
IIISLSLWPRVLDWLENREQVKKSEL
HHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVNFESKDKNRAVFLLSVATSVVLMSLFLLGTLLANIYSGETSYTLVDVVMGCIFVFIIT
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
IIISLSLWPRVLDWLENREQVKKSEL
HHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA