| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is ahcY
Identifier: 21228380
GI number: 21228380
Start: 2715977
End: 2717212
Strand: Reverse
Name: ahcY
Synonym: MM_2278
Alternate gene names: 21228380
Gene position: 2717212-2715977 (Counterclockwise)
Preceding gene: 21228381
Following gene: 21228379
Centisome position: 66.33
GC content: 48.79
Gene sequence:
>1236_bases ATGACAGAAAAAGAACTCATAGAATCCGGAAACATGAAAATGGAATGGGCAAGAAACCACATGCCCGTTCTTGCAATCAT CAGAGAAAAGTTTGAGAAAGAAAAACCCCTCAAAGGGCTCAAAGTAGGAATGGCACTGCACGTGGAAGCGAAAACCGCAG TCCTTGTCGAGACTCTCGCTGCTGGAGGTGCACAGGTAGCAATTTCAGGTTGCAACCCCCTGAGCACACAGGATGATGTG GCAGCTGCTTTAGATACTCGAGAAAACATAAACTGTTTTGCTAAGTACGGGTGCTGCACGGGCGAATATTACGAAGCAAT TGACAGAGTCCTTGATATTGAGCCTGACATCACAATCGACGATGGTGCAGACCTGATTTTTAAGCTTCACAAAGAAAGGC AGGAAATGCTTGCGAAAATCCTCGGAGGCTGCGAAGAGACCACCACAGGGGTACACAGGCTTCATGCCATGGAAAAAGAC GGCGCACTCAAGATGCCGGTAATAGCAGTAAACGATGCCATGACCAAGTACCTTTTTGACAACCGCTACGGGACAGGCCA GTCAGCATGGGACGGTATAAACCGTACTACAAACCTGCTTGTTGCAGGCAAGAATGTTGTTGTTGCAGGCTACGGCTGGT GCGGGCGCGGGGTTGCAATGCGGGCTACAGGCCTTGGAGCAAGCGTAATCGTCACTGAAATAGACCCCATAAGAGCCCTT GAAGCCAGAATGGACGGGCACAGGGTTATGAAAATGTCAGAGGCTGCAAAAATCGGAGACCTCTTTGTCACTGCAACAGG AAACCGCGATATCCTCACAGCCGACAACTTTAAGGTGATGAAAGACGGGGCAATTTTAGCAAACTCAGGCCACTTCAATG TAGAAATCGACATGGAAGCCCTTGATTCTCTTGCAAAATCCACAAGGACTGTCAGGCATAATATCAAAGAATACGACATT GGCAACAGGCGCATTAATGTGATTGCAGAAGGAAGACTCGTAAACCTGGCTGCAGGCGACGGGCACCCTGCCGAGGTTAT GGATATGAGTTTTGCAAACCAGGCCCTCTGTGTCCGTTATATTGCAGAAAATAAGCTTTCGAGCGGAGTCCACGGGGTCC CGAGAGAACTTGATACCTATGTTGCAAAACTGAAGCTTGAGTCTATGGGCATAGCCACCGATGAGCTTACTTCCAAGCAG GAATGCTACATGAGCGGCTGGGAATGTGGAACGTAA
Upstream 100 bases:
>100_bases TAATTGCAGAGTAACCGATATAAGCCATATTCGGTCATTTCATTCAAAAATTCTATCTACTTCATTCTATCAATCATTTA TCCAGTATAACGGGATCACC
Downstream 100 bases:
>100_bases TTTGAAATAAGCTACAGAAGATAATTTCAGTAATTTTAAAATGTTGATTCACAGGTGCAATGAATGCAGGCAGTTCTCCA TCTTCAGAAATGCAGTACAT
Product: S-adenosyl-L-homocysteine hydrolase
Products: NA
Alternate protein names: S-adenosyl-L-homocysteine hydrolase; AdoHcyase
Number of amino acids: Translated: 411; Mature: 410
Protein sequence:
>411_residues MTEKELIESGNMKMEWARNHMPVLAIIREKFEKEKPLKGLKVGMALHVEAKTAVLVETLAAGGAQVAISGCNPLSTQDDV AAALDTRENINCFAKYGCCTGEYYEAIDRVLDIEPDITIDDGADLIFKLHKERQEMLAKILGGCEETTTGVHRLHAMEKD GALKMPVIAVNDAMTKYLFDNRYGTGQSAWDGINRTTNLLVAGKNVVVAGYGWCGRGVAMRATGLGASVIVTEIDPIRAL EARMDGHRVMKMSEAAKIGDLFVTATGNRDILTADNFKVMKDGAILANSGHFNVEIDMEALDSLAKSTRTVRHNIKEYDI GNRRINVIAEGRLVNLAAGDGHPAEVMDMSFANQALCVRYIAENKLSSGVHGVPRELDTYVAKLKLESMGIATDELTSKQ ECYMSGWECGT
Sequences:
>Translated_411_residues MTEKELIESGNMKMEWARNHMPVLAIIREKFEKEKPLKGLKVGMALHVEAKTAVLVETLAAGGAQVAISGCNPLSTQDDV AAALDTRENINCFAKYGCCTGEYYEAIDRVLDIEPDITIDDGADLIFKLHKERQEMLAKILGGCEETTTGVHRLHAMEKD GALKMPVIAVNDAMTKYLFDNRYGTGQSAWDGINRTTNLLVAGKNVVVAGYGWCGRGVAMRATGLGASVIVTEIDPIRAL EARMDGHRVMKMSEAAKIGDLFVTATGNRDILTADNFKVMKDGAILANSGHFNVEIDMEALDSLAKSTRTVRHNIKEYDI GNRRINVIAEGRLVNLAAGDGHPAEVMDMSFANQALCVRYIAENKLSSGVHGVPRELDTYVAKLKLESMGIATDELTSKQ ECYMSGWECGT >Mature_410_residues TEKELIESGNMKMEWARNHMPVLAIIREKFEKEKPLKGLKVGMALHVEAKTAVLVETLAAGGAQVAISGCNPLSTQDDVA AALDTRENINCFAKYGCCTGEYYEAIDRVLDIEPDITIDDGADLIFKLHKERQEMLAKILGGCEETTTGVHRLHAMEKDG ALKMPVIAVNDAMTKYLFDNRYGTGQSAWDGINRTTNLLVAGKNVVVAGYGWCGRGVAMRATGLGASVIVTEIDPIRALE ARMDGHRVMKMSEAAKIGDLFVTATGNRDILTADNFKVMKDGAILANSGHFNVEIDMEALDSLAKSTRTVRHNIKEYDIG NRRINVIAEGRLVNLAAGDGHPAEVMDMSFANQALCVRYIAENKLSSGVHGVPRELDTYVAKLKLESMGIATDELTSKQE CYMSGWECGT
Specific function: May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
COG id: COG0499
COG function: function code H; S-adenosylhomocysteine hydrolase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the adenosylhomocysteinase family
Homologues:
Organism=Homo sapiens, GI9951915, Length=406, Percent_Identity=43.8423645320197, Blast_Score=301, Evalue=6e-82, Organism=Homo sapiens, GI239937451, Length=395, Percent_Identity=44.3037974683544, Blast_Score=297, Evalue=1e-80, Organism=Homo sapiens, GI298286489, Length=404, Percent_Identity=38.6138613861386, Blast_Score=271, Evalue=9e-73, Organism=Homo sapiens, GI195539349, Length=404, Percent_Identity=38.6138613861386, Blast_Score=271, Evalue=9e-73, Organism=Homo sapiens, GI195539337, Length=404, Percent_Identity=38.6138613861386, Blast_Score=271, Evalue=1e-72, Organism=Homo sapiens, GI24308043, Length=404, Percent_Identity=38.6138613861386, Blast_Score=270, Evalue=1e-72, Organism=Homo sapiens, GI21361647, Length=404, Percent_Identity=38.6138613861386, Blast_Score=255, Evalue=5e-68, Organism=Caenorhabditis elegans, GI17506425, Length=410, Percent_Identity=40.9756097560976, Blast_Score=295, Evalue=4e-80, Organism=Saccharomyces cerevisiae, GI6320882, Length=417, Percent_Identity=41.2470023980815, Blast_Score=290, Evalue=2e-79, Organism=Drosophila melanogaster, GI24642172, Length=406, Percent_Identity=44.0886699507389, Blast_Score=305, Evalue=4e-83, Organism=Drosophila melanogaster, GI24656245, Length=403, Percent_Identity=37.9652605459057, Blast_Score=256, Evalue=3e-68, Organism=Drosophila melanogaster, GI45553385, Length=400, Percent_Identity=38.75, Blast_Score=244, Evalue=7e-65, Organism=Drosophila melanogaster, GI45553387, Length=400, Percent_Identity=38.75, Blast_Score=244, Evalue=7e-65,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): SAHH_METMA (Q8PUQ4)
Other databases:
- EMBL: AE008384 - RefSeq: NP_634302.1 - ProteinModelPortal: Q8PUQ4 - SMR: Q8PUQ4 - GeneID: 1480620 - GenomeReviews: AE008384_GR - KEGG: mma:MM_2278 - NMPDR: fig|192952.1.peg.2278 - HOGENOM: HBG352029 - OMA: KMEWARN - ProtClustDB: PRK05476 - BioCyc: MMAZ192952:MM2278-MONOMER - BRENDA: 3.3.1.1 - GO: GO:0005737 - GO: GO:0005488 - HAMAP: MF_00563 - InterPro: IPR000043 - InterPro: IPR015878 - InterPro: IPR020082 - PANTHER: PTHR23420 - PIRSF: PIRSF001109 - TIGRFAMs: TIGR00936
Pfam domain/function: PF05221 AdoHcyase; PF00670 AdoHcyase_NAD
EC number: =3.3.1.1
Molecular weight: Translated: 44836; Mature: 44705
Theoretical pI: Translated: 5.49; Mature: 5.49
Prosite motif: PS00738 ADOHCYASE_1; PS00739 ADOHCYASE_2
Important sites: BINDING 121-121 BINDING 146-146 BINDING 176-176 BINDING 180-180 BINDING 181-181 BINDING 233-233 BINDING 268-268 BINDING 335-335
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEKELIESGNMKMEWARNHMPVLAIIREKFEKEKPLKGLKVGMALHVEAKTAVLVETLA CCHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCEEEEEEEEEECHHHHHHHHHH AGGAQVAISGCNPLSTQDDVAAALDTRENINCFAKYGCCTGEYYEAIDRVLDIEPDITID CCCCEEEEECCCCCCCCHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEC DGADLIFKLHKERQEMLAKILGGCEETTTGVHRLHAMEKDGALKMPVIAVNDAMTKYLFD CCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEECCEEEECHHHHHHHHC NRYGTGQSAWDGINRTTNLLVAGKNVVVAGYGWCGRGVAMRATGLGASVIVTEIDPIRAL CCCCCCCHHHCCCCCCEEEEEECCEEEEEECCCCCCCCEEEECCCCCEEEEECCCHHHHH EARMDGHRVMKMSEAAKIGDLFVTATGNRDILTADNFKVMKDGAILANSGHFNVEIDMEA HHHCCCHHHHHHHHHHCCCEEEEEECCCCCEEECCCEEEEECCEEEECCCEEEEEEEHHH LDSLAKSTRTVRHNIKEYDIGNRRINVIAEGRLVNLAAGDGHPAEVMDMSFANQALCVRY HHHHHHHHHHHHHCHHHCCCCCCEEEEEECCEEEEEECCCCCCHHHHHHHHCCHHHHHHH IAENKLSSGVHGVPRELDTYVAKLKLESMGIATDELTSKQECYMSGWECGT HHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHCCCCCCC >Mature Secondary Structure TEKELIESGNMKMEWARNHMPVLAIIREKFEKEKPLKGLKVGMALHVEAKTAVLVETLA CHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCEEEEEEEEEECHHHHHHHHHH AGGAQVAISGCNPLSTQDDVAAALDTRENINCFAKYGCCTGEYYEAIDRVLDIEPDITID CCCCEEEEECCCCCCCCHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEC DGADLIFKLHKERQEMLAKILGGCEETTTGVHRLHAMEKDGALKMPVIAVNDAMTKYLFD CCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEECCEEEECHHHHHHHHC NRYGTGQSAWDGINRTTNLLVAGKNVVVAGYGWCGRGVAMRATGLGASVIVTEIDPIRAL CCCCCCCHHHCCCCCCEEEEEECCEEEEEECCCCCCCCEEEECCCCCEEEEECCCHHHHH EARMDGHRVMKMSEAAKIGDLFVTATGNRDILTADNFKVMKDGAILANSGHFNVEIDMEA HHHCCCHHHHHHHHHHCCCEEEEEECCCCCEEECCCEEEEECCEEEECCCEEEEEEEHHH LDSLAKSTRTVRHNIKEYDIGNRRINVIAEGRLVNLAAGDGHPAEVMDMSFANQALCVRY HHHHHHHHHHHHHCHHHCCCCCCEEEEEECCEEEEEECCCCCCHHHHHHHHCCHHHHHHH IAENKLSSGVHGVPRELDTYVAKLKLESMGIATDELTSKQECYMSGWECGT HHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12125824