Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is arsR [C]

Identifier: 21228344

GI number: 21228344

Start: 2670925

End: 2671362

Strand: Direct

Name: arsR [C]

Synonym: MM_2242

Alternate gene names: 21228344

Gene position: 2670925-2671362 (Clockwise)

Preceding gene: 21228343

Following gene: 21228345

Centisome position: 65.2

GC content: 38.36

Gene sequence:

>438_bases
ATGGATATATGTGCATATATCCATATAATCATGCTTGATAGTAAAGTGAAATTCTTTAAAGCTCTCGGAGATGAAACACG
GCTTACCATCCTCTCTTACCTGCTGGAACACAGCTACTGTGCCTGTGACTTTTCTTCCCTTACAAAAAAGGACCAGACAA
CGGTTTCAAAACATTTGAAAGTCCTAGTTGAAGCTGGAATTTTAAAGTACGAAAAGCAGGGAAGAAACGTAATTTACAGC
ATTAAAAACGAAGAGATCAGCTGTTTGCTATTATCTCTTGGAATCCGGGATATAAAGCCCTGTTGTGATAGGCAACAGGC
TTCAGGAGTATGTTCTGTTTCAGAGGTATGTCCTGTGTGTAAAACCGAATACAGAATCAACAACACTATTAATGAGAGTA
CTGAAAACCGGGTTGAAAACAAAGCTAAAGATAACTGA

Upstream 100 bases:

>100_bases
GTGCCAAGTAAACTGATTGTTATTTGTAAAAAATAGGTTTCGGAAATAATAGAATTCTAAACCAGTGACAGTATTCTAAA
CCAGTGACCACCAAATATAT

Downstream 100 bases:

>100_bases
AAGTAAGCTCAAAACAAATAGAAAAATATCAACGATAAGGAATGGGATATAAAAATGGATGCGAATGAAAAAAAGGAAGT
TATCAAAAAGAAGTATCAGG

Product: ArsR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator ArsR Family; Regulatory Protein ArsR

Number of amino acids: Translated: 145; Mature: 145

Protein sequence:

>145_residues
MDICAYIHIIMLDSKVKFFKALGDETRLTILSYLLEHSYCACDFSSLTKKDQTTVSKHLKVLVEAGILKYEKQGRNVIYS
IKNEEISCLLLSLGIRDIKPCCDRQQASGVCSVSEVCPVCKTEYRINNTINESTENRVENKAKDN

Sequences:

>Translated_145_residues
MDICAYIHIIMLDSKVKFFKALGDETRLTILSYLLEHSYCACDFSSLTKKDQTTVSKHLKVLVEAGILKYEKQGRNVIYS
IKNEEISCLLLSLGIRDIKPCCDRQQASGVCSVSEVCPVCKTEYRINNTINESTENRVENKAKDN
>Mature_145_residues
MDICAYIHIIMLDSKVKFFKALGDETRLTILSYLLEHSYCACDFSSLTKKDQTTVSKHLKVLVEAGILKYEKQGRNVIYS
IKNEEISCLLLSLGIRDIKPCCDRQQASGVCSVSEVCPVCKTEYRINNTINESTENRVENKAKDN

Specific function: Transcriptional Repressor For The Arsefg Operon. Arse Is A Trans-Acting Regulatory Protein Which Controls Its Own Expression. The Repressive Effect Of Arse Is Alleviated By Oxyions Of +III Oxidation State Of Arsenic, Antimony, And Bismuth, As Well As Arse

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16432; Mature: 16432

Theoretical pI: Translated: 7.63; Mature: 7.63

Prosite motif: PS50987 HTH_ARSR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
7.6 %Cys+Met (Translated Protein)
6.2 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
7.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDICAYIHIIMLDSKVKFFKALGDETRLTILSYLLEHSYCACDFSSLTKKDQTTVSKHLK
CCHHHEEEHHHCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHCCHHHHHHHHHHH
VLVEAGILKYEKQGRNVIYSIKNEEISCLLLSLGIRDIKPCCDRQQASGVCSVSEVCPVC
HHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHCCHHHHHHCCHHHHCCCCCHHHHCCHH
KTEYRINNTINESTENRVENKAKDN
HHHHHHCCCCCHHHHHHHHHCCCCC
>Mature Secondary Structure
MDICAYIHIIMLDSKVKFFKALGDETRLTILSYLLEHSYCACDFSSLTKKDQTTVSKHLK
CCHHHEEEHHHCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHCCHHHHHHHHHHH
VLVEAGILKYEKQGRNVIYSIKNEEISCLLLSLGIRDIKPCCDRQQASGVCSVSEVCPVC
HHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHCCHHHHHHCCHHHHCCCCCHHHHCCHH
KTEYRINNTINESTENRVENKAKDN
HHHHHHCCCCCHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA