Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21228337

Identifier: 21228337

GI number: 21228337

Start: 2665106

End: 2666464

Strand: Direct

Name: 21228337

Synonym: MM_2235

Alternate gene names: NA

Gene position: 2665106-2666464 (Clockwise)

Preceding gene: 21228336

Following gene: 21228338

Centisome position: 65.06

GC content: 48.49

Gene sequence:

>1359_bases
ATGATTTTCAATGAGGCATGCAGCAATTTTGGAATCCCTGTAGAAACCGCACTTTCCGATCTCGGGCTTCCGAAGGATAT
GGATCCGCAGCTTACGATTCTTGAGGTTGAAGAGCATTACGGAGTTACAGGGCAGGAAATTGCGAGCTACATGGCTGCGA
ATATGCAGCAGAAGCCTGCCTCTATTAATTCCCGGCAACAGCTCATGATGCGCCAGCAAGCTGTACAGAACATGAGGGGT
ACGGGACAGGGAATGCATTTCATGCATAAGGGACGCTTTGCATATGGGAACTATACGACCTTCAGTTTTGATAACAGTTC
AGGAGAAGTCAGCAGTTTTGCGGTTGGCGGAGACCTGATTTTCAATTCGGTTACGGTTTCTGATTTTGCCTTTAAGGAAG
AGAGGGTTGCAGGGGCAACTGCTGTCTACGAAGGTGCTGACAGCCAGATTTTCCTCCATGATAACCCTATGGGAATCCTG
CAGATCCGGGCTTTTGCCAATAAAACCGTAGTTTTTGACCTTGCGGAAGAAGTGGAAGCAAGCATGGATACCGAACTTTC
AGACAGTCCGGGAGATGCAGTCATTGTAAATATTTCCAAAAATAATTTTGCAGGATACCTTATTGTCTTCAAGAATTATC
TTGCTACCGCCACTGGTGATGAGCCTATCGAAGGACCTGATGCCAGGGTTTCAGACGGCAGGGTTACAGTGACTCTTGTA
AATAACAGTGTGGTCATGTTCCGTGCAAGTCCCATGGACCCTGTTCTCATGCAGACCGGATACCGGTACGGCCCCCATGT
TGCATACATGCACCAGGTGCTTAGCCGGGAAATTGCCCGCGGCAGAATCGGAGCCGAAATATCACTCCGTGCAGGCGGGG
ATAATGCATCCGTTGTGAACTACACTCCCATGGGCGTGCACATCAGGGAAAGGGACAGAGACCGTGTAGTCCTCGAGGTG
AATTCCGATCTTCCAGAAGGCAGAGTCATTACCATAAATGTGGACAACGAGACCGTCAACCTTTCCAGTCCAGACCGCAT
CAGGCTCCGCTTTAATGGGAAAGTAATTGAAAAAGCGGGAAATATCGATGAACTCTTCGCCGGTGGAAACCGTCCGCTCT
GTTATCTCTTGCAGGAAAACGAAACTGCGACCATGGCAGTATATATCCCCGAATTTTCGGAACATGAAATTATAATTGAC
ATTGAGCCTGAAGCCGGGGAAGAAAGGGCTGGAGAAGAAACAGAGGAAGAAGAGACTACTGATGAGAGCAGTGAAGCTGA
ACCTGCACCAGCTTTTGAATTTGGGGCAGGTATTGCGTTAGTGGCTTCCATATATGTATTGAGGCGCAGGAAGCAGTGA

Upstream 100 bases:

>100_bases
AGGAAAGCCTGTTGACGGCATGGGCCCTGGAATGGGACATGGAATGATGAATGGTTACGGGTTTGACAGGTACGACAGCA
GGTTTGCAGGCTTCGGATCA

Downstream 100 bases:

>100_bases
ATAGTTTTTCCCGGTCTGCTTAAATTCAGTATAATTGAAAAATAGGTGCAGAGGCGTTGAGCTCCAAAAATCTGCATTAT
ATTTTCTTATTTTATTCTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 452; Mature: 452

Protein sequence:

>452_residues
MIFNEACSNFGIPVETALSDLGLPKDMDPQLTILEVEEHYGVTGQEIASYMAANMQQKPASINSRQQLMMRQQAVQNMRG
TGQGMHFMHKGRFAYGNYTTFSFDNSSGEVSSFAVGGDLIFNSVTVSDFAFKEERVAGATAVYEGADSQIFLHDNPMGIL
QIRAFANKTVVFDLAEEVEASMDTELSDSPGDAVIVNISKNNFAGYLIVFKNYLATATGDEPIEGPDARVSDGRVTVTLV
NNSVVMFRASPMDPVLMQTGYRYGPHVAYMHQVLSREIARGRIGAEISLRAGGDNASVVNYTPMGVHIRERDRDRVVLEV
NSDLPEGRVITINVDNETVNLSSPDRIRLRFNGKVIEKAGNIDELFAGGNRPLCYLLQENETATMAVYIPEFSEHEIIID
IEPEAGEERAGEETEEEETTDESSEAEPAPAFEFGAGIALVASIYVLRRRKQ

Sequences:

>Translated_452_residues
MIFNEACSNFGIPVETALSDLGLPKDMDPQLTILEVEEHYGVTGQEIASYMAANMQQKPASINSRQQLMMRQQAVQNMRG
TGQGMHFMHKGRFAYGNYTTFSFDNSSGEVSSFAVGGDLIFNSVTVSDFAFKEERVAGATAVYEGADSQIFLHDNPMGIL
QIRAFANKTVVFDLAEEVEASMDTELSDSPGDAVIVNISKNNFAGYLIVFKNYLATATGDEPIEGPDARVSDGRVTVTLV
NNSVVMFRASPMDPVLMQTGYRYGPHVAYMHQVLSREIARGRIGAEISLRAGGDNASVVNYTPMGVHIRERDRDRVVLEV
NSDLPEGRVITINVDNETVNLSSPDRIRLRFNGKVIEKAGNIDELFAGGNRPLCYLLQENETATMAVYIPEFSEHEIIID
IEPEAGEERAGEETEEEETTDESSEAEPAPAFEFGAGIALVASIYVLRRRKQ
>Mature_452_residues
MIFNEACSNFGIPVETALSDLGLPKDMDPQLTILEVEEHYGVTGQEIASYMAANMQQKPASINSRQQLMMRQQAVQNMRG
TGQGMHFMHKGRFAYGNYTTFSFDNSSGEVSSFAVGGDLIFNSVTVSDFAFKEERVAGATAVYEGADSQIFLHDNPMGIL
QIRAFANKTVVFDLAEEVEASMDTELSDSPGDAVIVNISKNNFAGYLIVFKNYLATATGDEPIEGPDARVSDGRVTVTLV
NNSVVMFRASPMDPVLMQTGYRYGPHVAYMHQVLSREIARGRIGAEISLRAGGDNASVVNYTPMGVHIRERDRDRVVLEV
NSDLPEGRVITINVDNETVNLSSPDRIRLRFNGKVIEKAGNIDELFAGGNRPLCYLLQENETATMAVYIPEFSEHEIIID
IEPEAGEERAGEETEEEETTDESSEAEPAPAFEFGAGIALVASIYVLRRRKQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49727; Mature: 49727

Theoretical pI: Translated: 4.32; Mature: 4.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFNEACSNFGIPVETALSDLGLPKDMDPQLTILEVEEHYGVTGQEIASYMAANMQQKPA
CCCHHHHCCCCCCHHHHHHHCCCCCCCCCCEEEEEEHHHCCCCHHHHHHHHHHCCCCCCC
SINSRQQLMMRQQAVQNMRGTGQGMHFMHKGRFAYGNYTTFSFDNSSGEVSSFAVGGDLI
CCCHHHHHHHHHHHHHHHCCCCCCCEEEECCEEEECCEEEEEECCCCCCEEEEEECCEEE
FNSVTVSDFAFKEERVAGATAVYEGADSQIFLHDNPMGILQIRAFANKTVVFDLAEEVEA
EEEEEECHHHHHHHHHCCCEEEEECCCCEEEEECCCCEEEEEEEECCCEEEEEEHHHHHH
SMDTELSDSPGDAVIVNISKNNFAGYLIVFKNYLATATGDEPIEGPDARVSDGRVTVTLV
HCCCCCCCCCCCEEEEEEECCCCCEEEEEEECHHHCCCCCCCCCCCCCEECCCEEEEEEE
NNSVVMFRASPMDPVLMQTGYRYGPHVAYMHQVLSREIARGRIGAEISLRAGGDNASVVN
CCEEEEEECCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEE
YTPMGVHIRERDRDRVVLEVNSDLPEGRVITINVDNETVNLSSPDRIRLRFNGKVIEKAG
EECCEEEEEECCCCEEEEEECCCCCCCEEEEEEECCCEEECCCCCEEEEEECCEEEECCC
NIDELFAGGNRPLCYLLQENETATMAVYIPEFSEHEIIIDIEPEAGEERAGEETEEEETT
CHHHHHCCCCCCEEEEEECCCCEEEEEEECCCCCCEEEEEECCCCCCCCCCCCCCHHHCC
DESSEAEPAPAFEFGAGIALVASIYVLRRRKQ
CCCCCCCCCCCHHHCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIFNEACSNFGIPVETALSDLGLPKDMDPQLTILEVEEHYGVTGQEIASYMAANMQQKPA
CCCHHHHCCCCCCHHHHHHHCCCCCCCCCCEEEEEEHHHCCCCHHHHHHHHHHCCCCCCC
SINSRQQLMMRQQAVQNMRGTGQGMHFMHKGRFAYGNYTTFSFDNSSGEVSSFAVGGDLI
CCCHHHHHHHHHHHHHHHCCCCCCCEEEECCEEEECCEEEEEECCCCCCEEEEEECCEEE
FNSVTVSDFAFKEERVAGATAVYEGADSQIFLHDNPMGILQIRAFANKTVVFDLAEEVEA
EEEEEECHHHHHHHHHCCCEEEEECCCCEEEEECCCCEEEEEEEECCCEEEEEEHHHHHH
SMDTELSDSPGDAVIVNISKNNFAGYLIVFKNYLATATGDEPIEGPDARVSDGRVTVTLV
HCCCCCCCCCCCEEEEEEECCCCCEEEEEEECHHHCCCCCCCCCCCCCEECCCEEEEEEE
NNSVVMFRASPMDPVLMQTGYRYGPHVAYMHQVLSREIARGRIGAEISLRAGGDNASVVN
CCEEEEEECCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEE
YTPMGVHIRERDRDRVVLEVNSDLPEGRVITINVDNETVNLSSPDRIRLRFNGKVIEKAG
EECCEEEEEECCCCEEEEEECCCCCCCEEEEEEECCCEEECCCCCEEEEEECCEEEECCC
NIDELFAGGNRPLCYLLQENETATMAVYIPEFSEHEIIIDIEPEAGEERAGEETEEEETT
CHHHHHCCCCCCEEEEEECCCCEEEEEEECCCCCCEEEEEECCCCCCCCCCCCCCHHHCC
DESSEAEPAPAFEFGAGIALVASIYVLRRRKQ
CCCCCCCCCCCHHHCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA