| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is rrmA [C]
Identifier: 21228321
GI number: 21228321
Start: 2644938
End: 2645525
Strand: Reverse
Name: rrmA [C]
Synonym: MM_2219
Alternate gene names: 21228321
Gene position: 2645525-2644938 (Counterclockwise)
Preceding gene: 21228322
Following gene: 21228320
Centisome position: 64.58
GC content: 40.48
Gene sequence:
>588_bases ATGAGCCAGAATTCAGAGAGTGGAAATTACAGGAAGTATACTTCCAGAAACCCGCTCATGGGGATAGTTGTATCCGGGTT TATGAAAGATTTGAGCGAAACTATAGCTCCACTGGAAGAAGTGGGAAGTATTATCGATATAGGCTGCGGGGAAGGGTTCA TCATTAACTGTCTTAACAGGAAAGATATTACAGGCGTGGATGTCTCAAAGAAAGCGTTAAATATCGCAAAACAAAAGAAT CCGGGCTGTAATTTCTGCACGGGAAGCATATATGACCTGTCATTTAAAAAGAGCAGTTTTGACCTCGTAATTGCAACGGA AGTGCTGGAACACCTTGAAAACCCGGAAAGAGCTCTCCGGGAAATAAAGAGAATATCTAAAAAATACTGCATATTCAGTG TGCCCAATGAGCCATATTTTCGCACAATGAATTTCTTAAGAGGTAAGAACCTTACACGCCTTGGGAATGACATTGAACAT TTACAGAACTGGAGCACAAAAGAGTTTGTAAAGTTAGTGGGAAGGCATTTTAATGTGGTGGAAGTAAAGAGACCTTTTCC GTGGACAATGGTATTGTGCGAAAAATAA
Upstream 100 bases:
>100_bases TCAGGAATAAATCAAAGATAAATCAGGAATAACAAATATAGACAGATATGTAGAATCAAAATCCAATACCGGAATTTTAA AACGTTTTATGGGGATTAAA
Downstream 100 bases:
>100_bases GGATTAAAGGTGCAGGAGCTTGGATAATTTTTTAGGAATAACTTTGTTCTCGTGGTCGTAACCAATCCCCGACAAATCCA GTTCAAGGGATTTTTTAATG
Product: hypothetical protein
Products: S-adenosyl-L-homocysteine +rRNA containing Nmethylguanine [C]
Alternate protein names: S-Adenosyl-L-Methionine-Methyltransferases; Methyltransferase; Methyltransferase Small Domain Superfamily; 3-Demethylubiquinone-9 3-O-Methyltransferase
Number of amino acids: Translated: 195; Mature: 194
Protein sequence:
>195_residues MSQNSESGNYRKYTSRNPLMGIVVSGFMKDLSETIAPLEEVGSIIDIGCGEGFIINCLNRKDITGVDVSKKALNIAKQKN PGCNFCTGSIYDLSFKKSSFDLVIATEVLEHLENPERALREIKRISKKYCIFSVPNEPYFRTMNFLRGKNLTRLGNDIEH LQNWSTKEFVKLVGRHFNVVEVKRPFPWTMVLCEK
Sequences:
>Translated_195_residues MSQNSESGNYRKYTSRNPLMGIVVSGFMKDLSETIAPLEEVGSIIDIGCGEGFIINCLNRKDITGVDVSKKALNIAKQKN PGCNFCTGSIYDLSFKKSSFDLVIATEVLEHLENPERALREIKRISKKYCIFSVPNEPYFRTMNFLRGKNLTRLGNDIEH LQNWSTKEFVKLVGRHFNVVEVKRPFPWTMVLCEK >Mature_194_residues SQNSESGNYRKYTSRNPLMGIVVSGFMKDLSETIAPLEEVGSIIDIGCGEGFIINCLNRKDITGVDVSKKALNIAKQKNP GCNFCTGSIYDLSFKKSSFDLVIATEVLEHLENPERALREIKRISKKYCIFSVPNEPYFRTMNFLRGKNLTRLGNDIEHL QNWSTKEFVKLVGRHFNVVEVKRPFPWTMVLCEK
Specific function: Specifically Methylates The Guanosine In Position 745 Of 23s rRNA. [C]
COG id: COG0500
COG function: function code QR; SAM-dependent methyltransferases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.1.1.51 [C]
Molecular weight: Translated: 22233; Mature: 22102
Theoretical pI: Translated: 9.02; Mature: 9.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQNSESGNYRKYTSRNPLMGIVVSGFMKDLSETIAPLEEVGSIIDIGCGEGFIINCLNR CCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCEEEEECCC KDITGVDVSKKALNIAKQKNPGCNFCTGSIYDLSFKKSSFDLVIATEVLEHLENPERALR CCCCCCCHHHHHHHHHHCCCCCCCEECCCEEEEEECCCCCCEEHHHHHHHHCCCHHHHHH EIKRISKKYCIFSVPNEPYFRTMNFLRGKNLTRLGNDIEHLQNWSTKEFVKLVGRHFNVV HHHHHHHHEEEEECCCCCHHHHHHHHCCCCHHHHCCHHHHHHCCCHHHHHHHHHCCCCEE EVKRPFPWTMVLCEK EECCCCCEEEEEECC >Mature Secondary Structure SQNSESGNYRKYTSRNPLMGIVVSGFMKDLSETIAPLEEVGSIIDIGCGEGFIINCLNR CCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCEEEEECCC KDITGVDVSKKALNIAKQKNPGCNFCTGSIYDLSFKKSSFDLVIATEVLEHLENPERALR CCCCCCCHHHHHHHHHHCCCCCCCEECCCEEEEEECCCCCCEEHHHHHHHHCCCHHHHHH EIKRISKKYCIFSVPNEPYFRTMNFLRGKNLTRLGNDIEHLQNWSTKEFVKLVGRHFNVV HHHHHHHHEEEEECCCCCHHHHHHHHCCCCHHHHCCHHHHHHCCCHHHHHHHHHCCCCEE EVKRPFPWTMVLCEK EECCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: Unidentified protein factor B [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: S-Adenosyl-L-methionine; rRNA [C]
Specific reaction: S-Adenosyl-L-methionine + rRNA = S-adenosyl-L-homocysteine +rRNA containing Nmethylguanine [C]
General reaction: Methyl group transfer [C]
Inhibitor: Mg2+; Unidentified protein factor A1 [C]
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA