| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21228312
Identifier: 21228312
GI number: 21228312
Start: 2626426
End: 2628924
Strand: Reverse
Name: 21228312
Synonym: MM_2210
Alternate gene names: NA
Gene position: 2628924-2626426 (Counterclockwise)
Preceding gene: 21228315
Following gene: 21228310
Centisome position: 64.18
GC content: 43.18
Gene sequence:
>2499_bases TTGATTATTACGAATAATATAACGAGGATTTCGGAGACAAAAAAGATTCCAAAAAAAATCAACCTGGGGATAATATCCCT GCTTATAGTTTTCATGATAGCGTTTCTCATGCGCATGCTCTCCTATGCTTCACTTACCGCAGACGGAGGCATAACCTTCA CGGGCTATGATGAATTTTATCATATGCGGCGCATTCTTTATACGACTTTTAATTTCCCCAGCTTCCTTAACTTTGACACC TACATTAATTATCCTTATGGTTTTGAAGTTGGGTGGCCTCCATTCTTTGACCTGTTAGGTGCTCTGCTTGCAATAATTCT CGGAGCAGGACAGCCCGATGTACACACCGTCGAATTTGCAGGAGCTATTTTACCCGTACTGCTCGGAGTCCTGACAATAA TCCCGGTATATGTGATTGCAGCCTCAATCTTTAACAGAAAAACAGGACTTGTTGGAGCTTTAGTTTTTGCGGTTCTGCCC GCTCACGTATATATATCACGTTTTGGGACAGTTGACCATCATGTGGCTGAAGTGTTCCTTTCAACAGTAGCCTATGCGTT TTTCATACTTGCGTTAAAGCAGGCAGGGGAAAGTAAGCTTTCATCAGGTTCGCTTAAAAATATATCATCAGATAAAAAAC CTGTAAAGCCTCTGGTTTATTCCGCGGTCTCAGGGCTCTTTTTTTCCCTCCTCATATTCACATGGGTAGGAGCTCCTGCC TTTGTCAGTTTTATTGTTCTTTACGCATTAATTCAGGCAACACTCGACCTTAAAACAGGAAGAAAATCGGATTACGTATT CATTTGCTCTGCCGTAGCCCTGCTTGCAACACTTCTGTTTACCATTCCTCTCTCGGCCGGGGCGGTCCGTGAAGGACTTG AGATGAGTGCAATGTACCTTTCCTGGTTCCAGGTAGTGTATCTGGTGATCATGCTTACCGGAATACTCCTTCTCTGGGGC TTTTCATCATACGCCTCAAAGAAAGAAATGGACTGGAAGTATTATCCTGGCATTTTAATCCTCGTTTTTGGCTCAGGGCT TCTTTTCCTGAGGATGTTTTCCGGTGAATACTACGCTTTTATTATTGAAGGCATGAGGTTCTTTTCAGGCAAAGGAGAAT ACATAAGCACGATTGTCGAAGCAGTCCCCCTGTTTTTGACAGGGCAGGGAAAATTTACTCTTTCAGGGGTGCTGGGAAGT TTCGGGCTTACTTTCCTCACTGCACTGGCAGGTCTTTTCCTTCTTATCCTTGAATTGAAAAGCGAAAAATCAAGACCTGA AAATATATTTTTCCTTGTATGGACACTTTTTTATGCTTATCTTGCCCTTTCCCAGAGACGCTTTACCTATCTTTTTGCAT TAAACGTTTCAATTCTTACTGCCTATCTCTTCTGGGTTCTGATGGAATCTCTTGATTTCGAAAATGAAATAAAAAAGCTG ATAAAACGCGGGAAGGGAGAGAGGAAAGTTTCTGAAACCGCTCTTCAAACAGAAAAAAAGTCATCATTAAAAAGGAAGTC GAAAAACAGACAGGTAACGGAATCAAAGAGTAAGACTGATGAACCGGACTACTTTAAACTTGTTTCCGGAACTGCACTTA TTGCACTTATTTTTGTTTCTTCGATCTGGATTGATGTGACTTATGCAAAAGATGGTGTCTCTATCGACCCTGGATGGCAG GACTCTCTTGAATGGCTTGAGGCTTCCACACCTGAGACTTCCTATTATCTTGAGCCTTCAGAAACCCCTGAGTATGGAGT GCTCAGCTGGTGGGACTACGGAAACTGGATAGTATATGTGGGAAAGCGCCCCGCAGTTTCAAATAACTTCCAGACAGGTG TAGAAGACTCTGCGAACTTCCTCCTGACAGATTCAGAAGAAGAAGCAAAAACAATAGTTGAGAAACTCAAAGTAAAATAT GTAATGACAGACACACTGATGGCAGAAGGCAAGTTCAGTTCTATTACCTCGTTAGCAGGGAAAGAGATTGGAGAGTATTA CGAAGTCGAAACCGTAAAAGGAGATACAGGCCTCAGGACCGTTGCGACTCCCAAACAGGCGCTTTTGCAGACTCAGGTAT ATAAGCTTCACAAACTCGACGGGACCTCTCTGGGACATTTCAGGCTGGTCCACGAAAGTGCCGTGAATTCCACGGATGAT GGGAACAGTAAAGAAAATACTGTAAAGGTATTCGAATATGTTAAAGGGGCAACTCTTTCAGGCACTGCAAGCCCTAACGA GACCGTAATGGCGACACTTGAGCTCAGCTCAAACACAGGCAGAAAATTTACATATCAGAAAGGGGACGTTGCAGATGAAA ATGGTTTGTTTGAGATAACTGTTCCCTACTCAACTGAAAGCACAGGAGACGGAGTTCATGCTACATCTGCCTACTCGCTG ACATCAGGGGAAAAACCGATCACCAGTGGCATTCAGGTGACTGAAGACGATATTTTGAACGGGAACAGAATAGAGGTAAA AGCCCCTGAAGGAGCATAA
Upstream 100 bases:
>100_bases ACAAGGCAAGAACAAGGCAAGAACAAGATTTAACCTATAATACTTCATGTATTAAAATCCCCAAACCCCCTCCTCATGGG TAGAAAAAAATACAACCGAG
Downstream 100 bases:
>100_bases AAAAACCTGAAAAAACCAAAAAAGTTAAAAAGATAAAAACGGATAAAAAATCTAAAAAGTCTAAAAAAAGACCTGAAAAA GTCTAAAAGCCTAAAAATGT
Product: oligosaccharyl transferase
Products: NA
Alternate protein names: Transmembrane Oligosaccharyl Transferase; Oligosaccharyl Transferase; Transmembrane Oligosaccharyltransferase; Oligosaccharyltransferase; Oligosaccharyltransferase AglB
Number of amino acids: Translated: 832; Mature: 832
Protein sequence:
>832_residues MIITNNITRISETKKIPKKINLGIISLLIVFMIAFLMRMLSYASLTADGGITFTGYDEFYHMRRILYTTFNFPSFLNFDT YINYPYGFEVGWPPFFDLLGALLAIILGAGQPDVHTVEFAGAILPVLLGVLTIIPVYVIAASIFNRKTGLVGALVFAVLP AHVYISRFGTVDHHVAEVFLSTVAYAFFILALKQAGESKLSSGSLKNISSDKKPVKPLVYSAVSGLFFSLLIFTWVGAPA FVSFIVLYALIQATLDLKTGRKSDYVFICSAVALLATLLFTIPLSAGAVREGLEMSAMYLSWFQVVYLVIMLTGILLLWG FSSYASKKEMDWKYYPGILILVFGSGLLFLRMFSGEYYAFIIEGMRFFSGKGEYISTIVEAVPLFLTGQGKFTLSGVLGS FGLTFLTALAGLFLLILELKSEKSRPENIFFLVWTLFYAYLALSQRRFTYLFALNVSILTAYLFWVLMESLDFENEIKKL IKRGKGERKVSETALQTEKKSSLKRKSKNRQVTESKSKTDEPDYFKLVSGTALIALIFVSSIWIDVTYAKDGVSIDPGWQ DSLEWLEASTPETSYYLEPSETPEYGVLSWWDYGNWIVYVGKRPAVSNNFQTGVEDSANFLLTDSEEEAKTIVEKLKVKY VMTDTLMAEGKFSSITSLAGKEIGEYYEVETVKGDTGLRTVATPKQALLQTQVYKLHKLDGTSLGHFRLVHESAVNSTDD GNSKENTVKVFEYVKGATLSGTASPNETVMATLELSSNTGRKFTYQKGDVADENGLFEITVPYSTESTGDGVHATSAYSL TSGEKPITSGIQVTEDDILNGNRIEVKAPEGA
Sequences:
>Translated_832_residues MIITNNITRISETKKIPKKINLGIISLLIVFMIAFLMRMLSYASLTADGGITFTGYDEFYHMRRILYTTFNFPSFLNFDT YINYPYGFEVGWPPFFDLLGALLAIILGAGQPDVHTVEFAGAILPVLLGVLTIIPVYVIAASIFNRKTGLVGALVFAVLP AHVYISRFGTVDHHVAEVFLSTVAYAFFILALKQAGESKLSSGSLKNISSDKKPVKPLVYSAVSGLFFSLLIFTWVGAPA FVSFIVLYALIQATLDLKTGRKSDYVFICSAVALLATLLFTIPLSAGAVREGLEMSAMYLSWFQVVYLVIMLTGILLLWG FSSYASKKEMDWKYYPGILILVFGSGLLFLRMFSGEYYAFIIEGMRFFSGKGEYISTIVEAVPLFLTGQGKFTLSGVLGS FGLTFLTALAGLFLLILELKSEKSRPENIFFLVWTLFYAYLALSQRRFTYLFALNVSILTAYLFWVLMESLDFENEIKKL IKRGKGERKVSETALQTEKKSSLKRKSKNRQVTESKSKTDEPDYFKLVSGTALIALIFVSSIWIDVTYAKDGVSIDPGWQ DSLEWLEASTPETSYYLEPSETPEYGVLSWWDYGNWIVYVGKRPAVSNNFQTGVEDSANFLLTDSEEEAKTIVEKLKVKY VMTDTLMAEGKFSSITSLAGKEIGEYYEVETVKGDTGLRTVATPKQALLQTQVYKLHKLDGTSLGHFRLVHESAVNSTDD GNSKENTVKVFEYVKGATLSGTASPNETVMATLELSSNTGRKFTYQKGDVADENGLFEITVPYSTESTGDGVHATSAYSL TSGEKPITSGIQVTEDDILNGNRIEVKAPEGA >Mature_832_residues MIITNNITRISETKKIPKKINLGIISLLIVFMIAFLMRMLSYASLTADGGITFTGYDEFYHMRRILYTTFNFPSFLNFDT YINYPYGFEVGWPPFFDLLGALLAIILGAGQPDVHTVEFAGAILPVLLGVLTIIPVYVIAASIFNRKTGLVGALVFAVLP AHVYISRFGTVDHHVAEVFLSTVAYAFFILALKQAGESKLSSGSLKNISSDKKPVKPLVYSAVSGLFFSLLIFTWVGAPA FVSFIVLYALIQATLDLKTGRKSDYVFICSAVALLATLLFTIPLSAGAVREGLEMSAMYLSWFQVVYLVIMLTGILLLWG FSSYASKKEMDWKYYPGILILVFGSGLLFLRMFSGEYYAFIIEGMRFFSGKGEYISTIVEAVPLFLTGQGKFTLSGVLGS FGLTFLTALAGLFLLILELKSEKSRPENIFFLVWTLFYAYLALSQRRFTYLFALNVSILTAYLFWVLMESLDFENEIKKL IKRGKGERKVSETALQTEKKSSLKRKSKNRQVTESKSKTDEPDYFKLVSGTALIALIFVSSIWIDVTYAKDGVSIDPGWQ DSLEWLEASTPETSYYLEPSETPEYGVLSWWDYGNWIVYVGKRPAVSNNFQTGVEDSANFLLTDSEEEAKTIVEKLKVKY VMTDTLMAEGKFSSITSLAGKEIGEYYEVETVKGDTGLRTVATPKQALLQTQVYKLHKLDGTSLGHFRLVHESAVNSTDD GNSKENTVKVFEYVKGATLSGTASPNETVMATLELSSNTGRKFTYQKGDVADENGLFEITVPYSTESTGDGVHATSAYSL TSGEKPITSGIQVTEDDILNGNRIEVKAPEGA
Specific function: Unknown
COG id: COG1287
COG function: function code R; Uncharacterized membrane protein, required for N-linked glycosylation
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 92239; Mature: 92239
Theoretical pI: Translated: 5.95; Mature: 5.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIITNNITRISETKKIPKKINLGIISLLIVFMIAFLMRMLSYASLTADGGITFTGYDEFY CEECCCCHHHHHHHHCHHHHCHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEECCHHHHH HMRRILYTTFNFPSFLNFDTYINYPYGFEVGWPPFFDLLGALLAIILGAGQPDVHTVEFA HHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHH GAILPVLLGVLTIIPVYVIAASIFNRKTGLVGALVFAVLPAHVYISRFGTVDHHVAEVFL HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH STVAYAFFILALKQAGESKLSSGSLKNISSDKKPVKPLVYSAVSGLFFSLLIFTWVGAPA HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHH FVSFIVLYALIQATLDLKTGRKSDYVFICSAVALLATLLFTIPLSAGAVREGLEMSAMYL HHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHCCCCHHHHHCHHHHHHHH SWFQVVYLVIMLTGILLLWGFSSYASKKEMDWKYYPGILILVFGSGLLFLRMFSGEYYAF HHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCEECCCEEEEECCCCHHHHHHHCCCEEEH IIEGMRFFSGKGEYISTIVEAVPLFLTGQGKFTLSGVLGSFGLTFLTALAGLFLLILELK HHHHHHHHCCCCHHHHHHHHHHCEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHH SEKSRPENIFFLVWTLFYAYLALSQRRFTYLFALNVSILTAYLFWVLMESLDFENEIKKL HCCCCCCCEEHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHCCHHHHHHHH IKRGKGERKVSETALQTEKKSSLKRKSKNRQVTESKSKTDEPDYFKLVSGTALIALIFVS HHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHH SIWIDVTYAKDGVSIDPGWQDSLEWLEASTPETSYYLEPSETPEYGVLSWWDYGNWIVYV HHHEEEEEECCCCCCCCCCHHHHHHHHCCCCCCEEEECCCCCCCCCCEEEEECCCEEEEE GKRPAVSNNFQTGVEDSANFLLTDSEEEAKTIVEKLKVKYVMTDTLMAEGKFSSITSLAG CCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHEEHHHHHCCCCHHHHHHHHH KEIGEYYEVETVKGDTGLRTVATPKQALLQTQVYKLHKLDGTSLGHFRLVHESAVNSTDD HHHCCCEEEEEEECCCCCEECCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHCCCCCC GNSKENTVKVFEYVKGATLSGTASPNETVMATLELSSNTGRKFTYQKGDVADENGLFEIT CCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCCEEEECCCCCCCCCCEEEEE VPYSTESTGDGVHATSAYSLTSGEKPITSGIQVTEDDILNGNRIEVKAPEGA ECCCCCCCCCCCCCCCEEEECCCCCCCCCCCEECCCCCCCCCEEEEECCCCC >Mature Secondary Structure MIITNNITRISETKKIPKKINLGIISLLIVFMIAFLMRMLSYASLTADGGITFTGYDEFY CEECCCCHHHHHHHHCHHHHCHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEECCHHHHH HMRRILYTTFNFPSFLNFDTYINYPYGFEVGWPPFFDLLGALLAIILGAGQPDVHTVEFA HHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHH GAILPVLLGVLTIIPVYVIAASIFNRKTGLVGALVFAVLPAHVYISRFGTVDHHVAEVFL HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH STVAYAFFILALKQAGESKLSSGSLKNISSDKKPVKPLVYSAVSGLFFSLLIFTWVGAPA HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHH FVSFIVLYALIQATLDLKTGRKSDYVFICSAVALLATLLFTIPLSAGAVREGLEMSAMYL HHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHCCCCHHHHHCHHHHHHHH SWFQVVYLVIMLTGILLLWGFSSYASKKEMDWKYYPGILILVFGSGLLFLRMFSGEYYAF HHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCEECCCEEEEECCCCHHHHHHHCCCEEEH IIEGMRFFSGKGEYISTIVEAVPLFLTGQGKFTLSGVLGSFGLTFLTALAGLFLLILELK HHHHHHHHCCCCHHHHHHHHHHCEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHH SEKSRPENIFFLVWTLFYAYLALSQRRFTYLFALNVSILTAYLFWVLMESLDFENEIKKL HCCCCCCCEEHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHCCHHHHHHHH IKRGKGERKVSETALQTEKKSSLKRKSKNRQVTESKSKTDEPDYFKLVSGTALIALIFVS HHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHH SIWIDVTYAKDGVSIDPGWQDSLEWLEASTPETSYYLEPSETPEYGVLSWWDYGNWIVYV HHHEEEEEECCCCCCCCCCHHHHHHHHCCCCCCEEEECCCCCCCCCCEEEEECCCEEEEE GKRPAVSNNFQTGVEDSANFLLTDSEEEAKTIVEKLKVKYVMTDTLMAEGKFSSITSLAG CCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHEEHHHHHCCCCHHHHHHHHH KEIGEYYEVETVKGDTGLRTVATPKQALLQTQVYKLHKLDGTSLGHFRLVHESAVNSTDD HHHCCCEEEEEEECCCCCEECCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHCCCCCC GNSKENTVKVFEYVKGATLSGTASPNETVMATLELSSNTGRKFTYQKGDVADENGLFEIT CCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCCEEEECCCCCCCCCCEEEEE VPYSTESTGDGVHATSAYSLTSGEKPITSGIQVTEDDILNGNRIEVKAPEGA ECCCCCCCCCCCCCCCEEEECCCCCCCCCCCEECCCCCCCCCEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA