| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is prs
Identifier: 21228307
GI number: 21228307
Start: 2620308
End: 2621195
Strand: Reverse
Name: prs
Synonym: MM_2205
Alternate gene names: 21228307
Gene position: 2621195-2620308 (Counterclockwise)
Preceding gene: 21228308
Following gene: 21228299
Centisome position: 63.99
GC content: 49.1
Gene sequence:
>888_bases ATGGAATATATCAAGACGGCAACTGAGGTATATATCTTGAAGATCATAGGTGGACCAGCATCACAGTTACTTGCCAGCCG CACAGCCAGAGCTCTGGGGACAGAGCCTGTTCTCTGCGAGTTTAACCGCTTCCCTGACGGGGAACTTTATCTTAGGATAG CAGAGGAAATAGAAAACGAAAAAGTTACCCTCATCCAGAGCACGCCCACTGACTCTGATTTTGTCGCCCTGCTTCAGCTT ATCGATGCCTGTGAAGGGGCAGCCGAAATAAATGTTGTGATCCCTTACATGGGCTATGCCAGGCAGGACAAGAAATTCAA GTCAGGAGAACCCGTAAGTGCCCGTGCAATTGCCCGCTGTATCAATGCTGACAGGGTTTTTACAATAAATATCCATGAAA AGAGCGTGCTTGAACACTTCCCTTGCCCCGCAGAAAATCTTGACGCAGCAGCCCTTATCGGCTCATATGTTGCAGGTTTC GGCCTTGAGCGCCCCATGCTGGTCGCTCCCGATGAAGGAGCACGGGGGCTTGTGAAGAATGTGGCTTCAGGACACGGTTT TGACCATGACCACCTTCAGAAGACAAGGCTCAGCGGAGATACAGTTGTAATCAAAACAAAGAACCTTGATGTAACAGGCA GGCACGTTGTCCTTGTGGACGATATGATTGCAACCGGAGGGACAATGGCTGAGTCGATACGGATGCTTAAATCCCAGGGA GCAATTGATGTCCACCTTGCCTGTGTACACCCTGTCCTTACAAGAAATGCAGCTTTAAGGCTCTTCCATGCAGGTGTAAA AGACATAATAGGAACCGACACGCTTGAAAAAGCCGAAAGCAAACTGAGTGTTGCCCCTCTTATTGCAGAAGCCCTTTCCG GGTACTAA
Upstream 100 bases:
>100_bases GGTGCTTGAGAAGCTAAAGGGTAAAGCTTGAAAAGATAAAAATGGCATTGAAAAGCTAGAGCCTGAAAAGCAGGGTCCAT AAAAATAAGTTTTTTAAAGG
Downstream 100 bases:
>100_bases ACTCTGAGTCAAAAGCTATATCTATGAATCAAAAAAACGTTACTTTATTTAAACGTTTTTTGATCCAACGAAACACAGGT GCTTCCCGCCTGGGAAGTAC
Product: ribose-phosphate pyrophosphokinase
Products: NA
Alternate protein names: RPPK; Phosphoribosyl pyrophosphate synthase; P-Rib-PP synthase; PRPP synthase
Number of amino acids: Translated: 295; Mature: 295
Protein sequence:
>295_residues MEYIKTATEVYILKIIGGPASQLLASRTARALGTEPVLCEFNRFPDGELYLRIAEEIENEKVTLIQSTPTDSDFVALLQL IDACEGAAEINVVIPYMGYARQDKKFKSGEPVSARAIARCINADRVFTINIHEKSVLEHFPCPAENLDAAALIGSYVAGF GLERPMLVAPDEGARGLVKNVASGHGFDHDHLQKTRLSGDTVVIKTKNLDVTGRHVVLVDDMIATGGTMAESIRMLKSQG AIDVHLACVHPVLTRNAALRLFHAGVKDIIGTDTLEKAESKLSVAPLIAEALSGY
Sequences:
>Translated_295_residues MEYIKTATEVYILKIIGGPASQLLASRTARALGTEPVLCEFNRFPDGELYLRIAEEIENEKVTLIQSTPTDSDFVALLQL IDACEGAAEINVVIPYMGYARQDKKFKSGEPVSARAIARCINADRVFTINIHEKSVLEHFPCPAENLDAAALIGSYVAGF GLERPMLVAPDEGARGLVKNVASGHGFDHDHLQKTRLSGDTVVIKTKNLDVTGRHVVLVDDMIATGGTMAESIRMLKSQG AIDVHLACVHPVLTRNAALRLFHAGVKDIIGTDTLEKAESKLSVAPLIAEALSGY >Mature_295_residues MEYIKTATEVYILKIIGGPASQLLASRTARALGTEPVLCEFNRFPDGELYLRIAEEIENEKVTLIQSTPTDSDFVALLQL IDACEGAAEINVVIPYMGYARQDKKFKSGEPVSARAIARCINADRVFTINIHEKSVLEHFPCPAENLDAAALIGSYVAGF GLERPMLVAPDEGARGLVKNVASGHGFDHDHLQKTRLSGDTVVIKTKNLDVTGRHVVLVDDMIATGGTMAESIRMLKSQG AIDVHLACVHPVLTRNAALRLFHAGVKDIIGTDTLEKAESKLSVAPLIAEALSGY
Specific function: Utilized by both the de novo and the salvage pathways by which endogenously formed or exogenously added pyrimidine, purine, or pyridine bases are converted to the corresponding ribonucleoside monophosphates. [C]
COG id: COG0462
COG function: function code FE; Phosphoribosylpyrophosphate synthetase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ribose-phosphate pyrophosphokinase family
Homologues:
Organism=Homo sapiens, GI4506127, Length=297, Percent_Identity=29.2929292929293, Blast_Score=108, Evalue=6e-24, Organism=Homo sapiens, GI4506129, Length=274, Percent_Identity=28.8321167883212, Blast_Score=106, Evalue=2e-23, Organism=Homo sapiens, GI28557709, Length=276, Percent_Identity=28.9855072463768, Blast_Score=104, Evalue=9e-23, Organism=Homo sapiens, GI84875539, Length=277, Percent_Identity=28.8808664259928, Blast_Score=104, Evalue=1e-22, Organism=Escherichia coli, GI1787458, Length=294, Percent_Identity=31.6326530612245, Blast_Score=139, Evalue=2e-34, Organism=Caenorhabditis elegans, GI25149168, Length=277, Percent_Identity=29.6028880866426, Blast_Score=112, Evalue=2e-25, Organism=Caenorhabditis elegans, GI17554702, Length=277, Percent_Identity=29.6028880866426, Blast_Score=111, Evalue=4e-25, Organism=Caenorhabditis elegans, GI71989924, Length=277, Percent_Identity=29.6028880866426, Blast_Score=110, Evalue=6e-25, Organism=Caenorhabditis elegans, GI17554704, Length=275, Percent_Identity=29.4545454545455, Blast_Score=109, Evalue=1e-24, Organism=Saccharomyces cerevisiae, GI6319403, Length=296, Percent_Identity=28.3783783783784, Blast_Score=105, Evalue=6e-24, Organism=Saccharomyces cerevisiae, GI6320946, Length=295, Percent_Identity=28.4745762711864, Blast_Score=104, Evalue=2e-23, Organism=Saccharomyces cerevisiae, GI6321776, Length=286, Percent_Identity=26.2237762237762, Blast_Score=91, Evalue=2e-19, Organism=Saccharomyces cerevisiae, GI6322667, Length=151, Percent_Identity=29.8013245033113, Blast_Score=71, Evalue=2e-13, Organism=Drosophila melanogaster, GI21355239, Length=274, Percent_Identity=27.3722627737226, Blast_Score=101, Evalue=6e-22, Organism=Drosophila melanogaster, GI45551540, Length=295, Percent_Identity=25.4237288135593, Blast_Score=91, Evalue=7e-19,
Paralogues:
None
Copy number: 160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): KPRS_METMA (Q8PUX3)
Other databases:
- EMBL: AE008384 - RefSeq: NP_634229.1 - ProteinModelPortal: Q8PUX3 - SMR: Q8PUX3 - GeneID: 1480547 - GenomeReviews: AE008384_GR - KEGG: mma:MM_2205 - NMPDR: fig|192952.1.peg.2205 - HOGENOM: HBG519284 - OMA: YARQDRT - ProtClustDB: PRK00934 - BioCyc: MMAZ192952:MM2205-MONOMER - BRENDA: 2.7.6.1 - GO: GO:0005737 - HAMAP: MF_00583_A - InterPro: IPR005946 - InterPro: IPR000836 - TIGRFAMs: TIGR01251
Pfam domain/function: PF00156 Pribosyltran
EC number: =2.7.6.1
Molecular weight: Translated: 31877; Mature: 31877
Theoretical pI: Translated: 5.83; Mature: 5.83
Prosite motif: PS00114 PRPP_SYNTHASE; PS00103 PUR_PYR_PR_TRANSFER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEYIKTATEVYILKIIGGPASQLLASRTARALGTEPVLCEFNRFPDGELYLRIAEEIENE CCCHHHHCEEEEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEEHHHCCCC KVTLIQSTPTDSDFVALLQLIDACEGAAEINVVIPYMGYARQDKKFKSGEPVSARAIARC EEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHH INADRVFTINIHEKSVLEHFPCPAENLDAAALIGSYVAGFGLERPMLVAPDEGARGLVKN HCCCEEEEEEECHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCEEECCCCCCHHHHHH VASGHGFDHDHLQKTRLSGDTVVIKTKNLDVTGRHVVLVDDMIATGGTMAESIRMLKSQG HHCCCCCCHHHHHHHHCCCCEEEEEECCCCCCCCEEEEEECHHHCCCHHHHHHHHHHHCC AIDVHLACVHPVLTRNAALRLFHAGVKDIIGTDTLEKAESKLSVAPLIAEALSGY CEEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MEYIKTATEVYILKIIGGPASQLLASRTARALGTEPVLCEFNRFPDGELYLRIAEEIENE CCCHHHHCEEEEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEEHHHCCCC KVTLIQSTPTDSDFVALLQLIDACEGAAEINVVIPYMGYARQDKKFKSGEPVSARAIARC EEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHH INADRVFTINIHEKSVLEHFPCPAENLDAAALIGSYVAGFGLERPMLVAPDEGARGLVKN HCCCEEEEEEECHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCEEECCCCCCHHHHHH VASGHGFDHDHLQKTRLSGDTVVIKTKNLDVTGRHVVLVDDMIATGGTMAESIRMLKSQG HHCCCCCCHHHHHHHHCCCCEEEEEECCCCCCCCEEEEEECHHHCCCHHHHHHHHHHHCC AIDVHLACVHPVLTRNAALRLFHAGVKDIIGTDTLEKAESKLSVAPLIAEALSGY CEEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12125824