Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21228305

Identifier: 21228305

GI number: 21228305

Start: 2615782

End: 2616816

Strand: Direct

Name: 21228305

Synonym: MM_2203

Alternate gene names: NA

Gene position: 2615782-2616816 (Clockwise)

Preceding gene: 21228304

Following gene: 21228306

Centisome position: 63.86

GC content: 46.57

Gene sequence:

>1035_bases
ATGAATAGAAACCACCTTTCCAGCAACCAGTCAGATTTCATCCTTTACACTTCAAATGACGGGAACGTAAAGGTGGAAGT
CATATTACAGGATGAAACTATCTGGCTGACCCAGAGATCAATCGGGGAGCTGTTCGGGAAATCAAAAGCAACCATTAGCG
AGCATATTAAAAAAATATATGCGGAAGGAGAATTACAGATGGATTCAACTGTTCGGAATTTCCGAACAGTTCAGGTGGAA
GGATCGAGGCAGGTGGAAAGAGACCTGGAATTTTACAACCTTGATGCGATCATTTCGGTCGGGTATCGCGTCAACAGTGT
CCAGGCAACCCAATTCCGCATCTGGGCAACCCGGACACTGAAGGAATACATCATCAAAGGGTTTGTACTGGACGATGAAC
GGCTCAAGCAGGGGAACCGGGTTTTCGGAAAAGATTATTTCGAAGAACTCCTTGAGCGGATCAGGGAAATCCGTGCAAGC
GAGCGTCGGTTCTACCAGAAGATCACTGACATCTACGCCCTCTCTGCGGATTATGACAAAAATGCACCTCAAACAAAGGA
ATTCTTTGCCACGGTCCAGAACAAGCTCCACTGGGCGATCACCGGAAAAACAGCAGCGGAGATCATTTATGATTCCGCAG
ATGCAACAAAATTGCACATGGGACTGACAAACTGGAAACATGCACCTGACGGAAAAATAATGAAATCGGATGTTTCAGTC
GCCAAGAACTACCTGGGAGAAGCCCATATCCGGGAACTGAACCGGCTTGTCTCTGCCTATCTCGACCTTGCAGAAAACAG
GGCGCAACGCCATATCCTGATGAAAATGCAGGACTGGAGTGAATTTCTCCATAACTTTTTGGAACTATCCAGCTATCCGA
TACTAAAGGATAAAGGCAGGGTCAGCGCACTTGAAGCAAAACTGAAAGCCGAACAGGAATACGAAGAATACCGCGTAATA
CAGGACAGGAATTACATCTCCGACTTTGATAAAGAGGTACGGCGCATCAGGGAGAGCACGGATGACTACAACTAA

Upstream 100 bases:

>100_bases
TCAACAGGAAGAATACCGGGTAAAAACTCGCTACAGAACTTCTCAGGAAATCAATTTTTCAATACCACACCAGCAGCTAA
CCATGCGGAGCTAAAGGCCC

Downstream 100 bases:

>100_bases
AATCACCGAGTCCGAAATAGAAAAATTCGCCATCGAACTCCTTGAACGTCAGGGTTACCAGTATATCTACGCCCCGGACA
TTGCTCCGGATAGCGACACT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 344; Mature: 344

Protein sequence:

>344_residues
MNRNHLSSNQSDFILYTSNDGNVKVEVILQDETIWLTQRSIGELFGKSKATISEHIKKIYAEGELQMDSTVRNFRTVQVE
GSRQVERDLEFYNLDAIISVGYRVNSVQATQFRIWATRTLKEYIIKGFVLDDERLKQGNRVFGKDYFEELLERIREIRAS
ERRFYQKITDIYALSADYDKNAPQTKEFFATVQNKLHWAITGKTAAEIIYDSADATKLHMGLTNWKHAPDGKIMKSDVSV
AKNYLGEAHIRELNRLVSAYLDLAENRAQRHILMKMQDWSEFLHNFLELSSYPILKDKGRVSALEAKLKAEQEYEEYRVI
QDRNYISDFDKEVRRIRESTDDYN

Sequences:

>Translated_344_residues
MNRNHLSSNQSDFILYTSNDGNVKVEVILQDETIWLTQRSIGELFGKSKATISEHIKKIYAEGELQMDSTVRNFRTVQVE
GSRQVERDLEFYNLDAIISVGYRVNSVQATQFRIWATRTLKEYIIKGFVLDDERLKQGNRVFGKDYFEELLERIREIRAS
ERRFYQKITDIYALSADYDKNAPQTKEFFATVQNKLHWAITGKTAAEIIYDSADATKLHMGLTNWKHAPDGKIMKSDVSV
AKNYLGEAHIRELNRLVSAYLDLAENRAQRHILMKMQDWSEFLHNFLELSSYPILKDKGRVSALEAKLKAEQEYEEYRVI
QDRNYISDFDKEVRRIRESTDDYN
>Mature_344_residues
MNRNHLSSNQSDFILYTSNDGNVKVEVILQDETIWLTQRSIGELFGKSKATISEHIKKIYAEGELQMDSTVRNFRTVQVE
GSRQVERDLEFYNLDAIISVGYRVNSVQATQFRIWATRTLKEYIIKGFVLDDERLKQGNRVFGKDYFEELLERIREIRAS
ERRFYQKITDIYALSADYDKNAPQTKEFFATVQNKLHWAITGKTAAEIIYDSADATKLHMGLTNWKHAPDGKIMKSDVSV
AKNYLGEAHIRELNRLVSAYLDLAENRAQRHILMKMQDWSEFLHNFLELSSYPILKDKGRVSALEAKLKAEQEYEEYRVI
QDRNYISDFDKEVRRIRESTDDYN

Specific function: Unknown

COG id: COG3943

COG function: function code R; Virulence protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40298; Mature: 40298

Theoretical pI: Translated: 6.74; Mature: 6.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRNHLSSNQSDFILYTSNDGNVKVEVILQDETIWLTQRSIGELFGKSKATISEHIKKIY
CCCCCCCCCCCCEEEEECCCCCEEEEEEEECCEEEEEHHHHHHHHCCCCHHHHHHHHHHH
AEGELQMDSTVRNFRTVQVEGSRQVERDLEFYNLDAIISVGYRVNSVQATQFRIWATRTL
HCCCEEEHHHHHCEEEEEECCCHHHHHCCHHCCCHHHEEECEEECCEEEEEEEEHHHHHH
KEYIIKGFVLDDERLKQGNRVFGKDYFEELLERIREIRASERRFYQKITDIYALSADYDK
HHHHHHCEEECHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCC
NAPQTKEFFATVQNKLHWAITGKTAAEIIYDSADATKLHMGLTNWKHAPDGKIMKSDVSV
CCCHHHHHHHHHHHCEEEEEECCHHHHHEECCCCCEEEEECCCCCCCCCCCCEEHHHHHH
AKNYLGEAHIRELNRLVSAYLDLAENRAQRHILMKMQDWSEFLHNFLELSSYPILKDKGR
HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
VSALEAKLKAEQEYEEYRVIQDRNYISDFDKEVRRIRESTDDYN
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MNRNHLSSNQSDFILYTSNDGNVKVEVILQDETIWLTQRSIGELFGKSKATISEHIKKIY
CCCCCCCCCCCCEEEEECCCCCEEEEEEEECCEEEEEHHHHHHHHCCCCHHHHHHHHHHH
AEGELQMDSTVRNFRTVQVEGSRQVERDLEFYNLDAIISVGYRVNSVQATQFRIWATRTL
HCCCEEEHHHHHCEEEEEECCCHHHHHCCHHCCCHHHEEECEEECCEEEEEEEEHHHHHH
KEYIIKGFVLDDERLKQGNRVFGKDYFEELLERIREIRASERRFYQKITDIYALSADYDK
HHHHHHCEEECHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCC
NAPQTKEFFATVQNKLHWAITGKTAAEIIYDSADATKLHMGLTNWKHAPDGKIMKSDVSV
CCCHHHHHHHHHHHCEEEEEECCHHHHHEECCCCCEEEEECCCCCCCCCCCCEEHHHHHH
AKNYLGEAHIRELNRLVSAYLDLAENRAQRHILMKMQDWSEFLHNFLELSSYPILKDKGR
HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
VSALEAKLKAEQEYEEYRVIQDRNYISDFDKEVRRIRESTDDYN
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA