Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21228303

Identifier: 21228303

GI number: 21228303

Start: 2614484

End: 2615443

Strand: Direct

Name: 21228303

Synonym: MM_2201

Alternate gene names: NA

Gene position: 2614484-2615443 (Clockwise)

Preceding gene: 21228302

Following gene: 21228304

Centisome position: 63.82

GC content: 26.56

Gene sequence:

>960_bases
GTGACAATATATATTTTGGAAGGAAATATGAACACATTGATTGAAAACTTGAACCATATTTTGAGAGGTACTATATCAAT
TGTTGTTTATTTCAAGCTTAAAAATGGTGAGGTGAGACTTGCTGATATTAACAACAATGTGTTACCACGCATTTTAACAT
TATATAAAAATAAAATCAGTGAAGAAATTATTAATAAAGAAAATTTGGAATTATTGAAACTTTCAGAGATGGATGAAAGA
AAAAATGTTATTTACAAATATGATTTTGACAAAGATAGAGAACCTTTTTTGAGTATGAAGCAAGTTGTTGAGGATGAAGA
AATAAAAACATTCAGCATCTCCAATGACACATTAGAAAATATCGATGGAATTATTGCTAAAATCAGTAATTCTAATCATG
GCATATTCTTGTATACTAAATTTTACCCTGTAAACTTAATTAAGCCAGGTAAATCAATAAACTTGTTCCCATCAGATCAC
CGTTTAGAAATGTTTGATGGGAAACTAATTCAAATTACGGGCAAATTTGATATTTTAAGATACAACAACGAATATTATAT
CAAAAAACACGAAATACTGGAGAAATTTTACCAATTTAACGATGTAATAACAGAGAGAGCTAAAAGTTACTTTGAAGAGA
TCATAAAAATTAAAATAATTGAGAATGAAGCGAAGTTATTTTCATACCTTGAAAATAATCCTTCACGTGCCCGAAAGTTC
ATAAAAGTAATGGCTTCATCACTTGTTATTAAAAAGAAAATTCCTAAAGAACAGTTAATTTCATTTGTTTCAAATAATCC
TAAATTAAAAGATAATATTGAAACAAGTGAAGACAAGACTAAATTTAAATTAAAAACAAATAATCATTGTAATTTCTTTA
TTAAACTGTTAGATGATGATTTTTTGAAATCAGAATTGACACAAGAAGAATATGAAGCACTTGCTAAGAATAATGTTTAA

Upstream 100 bases:

>100_bases
AGTAGAAAAAAGGAACTAGAGACTGAAACTTATAAAAATATAATCGTGATCACTAAAACAAATATATCATTAAATGATGA
AGTTCAATTATTATTTTTAA

Downstream 100 bases:

>100_bases
ACATGACCATGAATGAGAACAACCTTTCCAGCAACCAGTCAGATTTCATTCTCTACACTTCAAATGATGGGAAAGTAAAG
GTTGATGTTGTACTGAAGGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 319; Mature: 318

Protein sequence:

>319_residues
MTIYILEGNMNTLIENLNHILRGTISIVVYFKLKNGEVRLADINNNVLPRILTLYKNKISEEIINKENLELLKLSEMDER
KNVIYKYDFDKDREPFLSMKQVVEDEEIKTFSISNDTLENIDGIIAKISNSNHGIFLYTKFYPVNLIKPGKSINLFPSDH
RLEMFDGKLIQITGKFDILRYNNEYYIKKHEILEKFYQFNDVITERAKSYFEEIIKIKIIENEAKLFSYLENNPSRARKF
IKVMASSLVIKKKIPKEQLISFVSNNPKLKDNIETSEDKTKFKLKTNNHCNFFIKLLDDDFLKSELTQEEYEALAKNNV

Sequences:

>Translated_319_residues
MTIYILEGNMNTLIENLNHILRGTISIVVYFKLKNGEVRLADINNNVLPRILTLYKNKISEEIINKENLELLKLSEMDER
KNVIYKYDFDKDREPFLSMKQVVEDEEIKTFSISNDTLENIDGIIAKISNSNHGIFLYTKFYPVNLIKPGKSINLFPSDH
RLEMFDGKLIQITGKFDILRYNNEYYIKKHEILEKFYQFNDVITERAKSYFEEIIKIKIIENEAKLFSYLENNPSRARKF
IKVMASSLVIKKKIPKEQLISFVSNNPKLKDNIETSEDKTKFKLKTNNHCNFFIKLLDDDFLKSELTQEEYEALAKNNV
>Mature_318_residues
TIYILEGNMNTLIENLNHILRGTISIVVYFKLKNGEVRLADINNNVLPRILTLYKNKISEEIINKENLELLKLSEMDERK
NVIYKYDFDKDREPFLSMKQVVEDEEIKTFSISNDTLENIDGIIAKISNSNHGIFLYTKFYPVNLIKPGKSINLFPSDHR
LEMFDGKLIQITGKFDILRYNNEYYIKKHEILEKFYQFNDVITERAKSYFEEIIKIKIIENEAKLFSYLENNPSRARKFI
KVMASSLVIKKKIPKEQLISFVSNNPKLKDNIETSEDKTKFKLKTNNHCNFFIKLLDDDFLKSELTQEEYEALAKNNV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37581; Mature: 37450

Theoretical pI: Translated: 8.31; Mature: 8.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIYILEGNMNTLIENLNHILRGTISIVVYFKLKNGEVRLADINNNVLPRILTLYKNKIS
CEEEEEECCHHHHHHHHHHHHHCEEEEEEEEEEECCEEEEEECCCCHHHHHHHHHHHHHH
EEIINKENLELLKLSEMDERKNVIYKYDFDKDREPFLSMKQVVEDEEIKTFSISNDTLEN
HHHHCCCCCEEEEECCCCCCCCEEEEECCCCCCCHHHHHHHHHCCCCCEEEEECCCHHHH
IDGIIAKISNSNHGIFLYTKFYPVNLIKPGKSINLFPSDHRLEMFDGKLIQITGKFDILR
HHHEEEEECCCCCEEEEEEEEEEEEEECCCCCEEECCCCCEEEEECCEEEEEECCEEEEE
YNNEYYIKKHEILEKFYQFNDVITERAKSYFEEIIKIKIIENEAKLFSYLENNPSRARKF
ECCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCHHHHHHHHHCCHHHHHHH
IKVMASSLVIKKKIPKEQLISFVSNNPKLKDNIETSEDKTKFKLKTNNHCNFFIKLLDDD
HHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEEECCCH
FLKSELTQEEYEALAKNNV
HHHHHCCHHHHHHHHCCCC
>Mature Secondary Structure 
TIYILEGNMNTLIENLNHILRGTISIVVYFKLKNGEVRLADINNNVLPRILTLYKNKIS
EEEEEECCHHHHHHHHHHHHHCEEEEEEEEEEECCEEEEEECCCCHHHHHHHHHHHHHH
EEIINKENLELLKLSEMDERKNVIYKYDFDKDREPFLSMKQVVEDEEIKTFSISNDTLEN
HHHHCCCCCEEEEECCCCCCCCEEEEECCCCCCCHHHHHHHHHCCCCCEEEEECCCHHHH
IDGIIAKISNSNHGIFLYTKFYPVNLIKPGKSINLFPSDHRLEMFDGKLIQITGKFDILR
HHHEEEEECCCCCEEEEEEEEEEEEEECCCCCEEECCCCCEEEEECCEEEEEECCEEEEE
YNNEYYIKKHEILEKFYQFNDVITERAKSYFEEIIKIKIIENEAKLFSYLENNPSRARKF
ECCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCHHHHHHHHHCCHHHHHHH
IKVMASSLVIKKKIPKEQLISFVSNNPKLKDNIETSEDKTKFKLKTNNHCNFFIKLLDDD
HHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEEECCCH
FLKSELTQEEYEALAKNNV
HHHHHCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA