Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21228262

Identifier: 21228262

GI number: 21228262

Start: 2563737

End: 2564168

Strand: Direct

Name: 21228262

Synonym: MM_2160

Alternate gene names: NA

Gene position: 2563737-2564168 (Clockwise)

Preceding gene: 21228260

Following gene: 21228267

Centisome position: 62.59

GC content: 34.26

Gene sequence:

>432_bases
GTGATTCGATCAGTAATTGTACCATTACTTGTATCTGCATTGATTCACGTCTTTGCACTATCGGTGTTTATTTTTGATAT
TTTTCACATATTACCGGAACTTTTTGAAGTTCTTATGGTACTGATCAGTATATTTGTATACCCACTAGCCCCTATCTTTT
ACGGATTGCAGACAAAAGATCGAATAGGATCTGTTATAGTTGGAACGGTACCAATATTATGTTTGTTCTACGAATTACAT
CTAAATTCATTTATTGCTGGAAATGTTCCTGAAACAGAGCGGATTCTCGACATTTTTACTTATTTTGGAAGTTTGGCAAT
TATTGGCGGACTAGAAGGGTATTATGCATCAAAAGAGCAGTTTGATTCTCTTATCATTGCAGTAGTTCTTGCGATATTTT
GGATAAGCATATTTCTAAACGGATTAGATTGA

Upstream 100 bases:

>100_bases
GTACACGTCTTTATAAGTTAGAAAATCATGAGTAAAAATTAACCTGCTTGTTGATTTTGACTGCAATGGTTATGTTATTA
TGGAAAAAATGAAGATAAAA

Downstream 100 bases:

>100_bases
AAGTATTTGAGGTTTTGCCAAAATTGATAAAAATTCTCTAAAAGAAGAAAAATGGCACATAATCATTTATTTTGTCAAAA
AATACATCAAATACCTTAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 143; Mature: 143

Protein sequence:

>143_residues
MIRSVIVPLLVSALIHVFALSVFIFDIFHILPELFEVLMVLISIFVYPLAPIFYGLQTKDRIGSVIVGTVPILCLFYELH
LNSFIAGNVPETERILDIFTYFGSLAIIGGLEGYYASKEQFDSLIIAVVLAIFWISIFLNGLD

Sequences:

>Translated_143_residues
MIRSVIVPLLVSALIHVFALSVFIFDIFHILPELFEVLMVLISIFVYPLAPIFYGLQTKDRIGSVIVGTVPILCLFYELH
LNSFIAGNVPETERILDIFTYFGSLAIIGGLEGYYASKEQFDSLIIAVVLAIFWISIFLNGLD
>Mature_143_residues
MIRSVIVPLLVSALIHVFALSVFIFDIFHILPELFEVLMVLISIFVYPLAPIFYGLQTKDRIGSVIVGTVPILCLFYELH
LNSFIAGNVPETERILDIFTYFGSLAIIGGLEGYYASKEQFDSLIIAVVLAIFWISIFLNGLD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16017; Mature: 16017

Theoretical pI: Translated: 4.34; Mature: 4.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRSVIVPLLVSALIHVFALSVFIFDIFHILPELFEVLMVLISIFVYPLAPIFYGLQTKD
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
RIGSVIVGTVPILCLFYELHLNSFIAGNVPETERILDIFTYFGSLAIIGGLEGYYASKEQ
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHCCHHH
FDSLIIAVVLAIFWISIFLNGLD
HHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIRSVIVPLLVSALIHVFALSVFIFDIFHILPELFEVLMVLISIFVYPLAPIFYGLQTKD
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
RIGSVIVGTVPILCLFYELHLNSFIAGNVPETERILDIFTYFGSLAIIGGLEGYYASKEQ
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHCCHHH
FDSLIIAVVLAIFWISIFLNGLD
HHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA