| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is paaY [C]
Identifier: 21228253
GI number: 21228253
Start: 2553921
End: 2554466
Strand: Reverse
Name: paaY [C]
Synonym: MM_2151
Alternate gene names: 21228253
Gene position: 2554466-2553921 (Counterclockwise)
Preceding gene: 21228261
Following gene: 21228217
Centisome position: 62.36
GC content: 47.99
Gene sequence:
>546_bases ATGCACCTTCCAAACCCCCATAAACAGCACCCGAAAGTCAGTAAAAGGGCATGGATATCAGAAACTGCAGTAATAATCGG AAATGTGAGTATTGCAGATAATGTGTTCGTAGGCCCAAACGCGGTTCTCAGGGCAGATGAGCCCGGGTCATCCATAACAG TTCAGAGCGGCAGCAATGTACAGGACAATGTTGTTGTCCATTCCCTCTCACACTCAGAAGTCCACATAGGCAAAAATACA TCTCTTGCCCACGGGTGCATTGTACACGGGCCCTGCAGGATAGAAGAAAACTGCTTTATAGGGTTTGGAGCAGTGGTGTT TGACTGCAATATAGGGAAAGATACTCTTGTCCTCCACAGGTCCGTAGTCCGCGGAGTAAATATTTCTTCGGGCAAAGTGG TACCTGACGGGAGTGTGGTTACAGGCCAGGGATGTGCTGACACCCTTGAAGGAACCACAAAAGACCTTAATGAGTTTAAA AGGTCCGTAGTCAGGGCAAATGTTGACCTCGTAGAGGGATATATCAGGCTTGGAGAGGAAAGCTGA
Upstream 100 bases:
>100_bases TCGAGATACAGGACATGGAGCCTGACCTGGGAGAACCATAGCAGATTCATAAAAATGATCCGCTAGAAAGCGCTTTCAGG TATCAAAAAGGAGTTTAGAA
Downstream 100 bases:
>100_bases AAACAAAGGGATGCAAACTCTCCGAAATTGTCAAAAACAGAATAATATCATGAACCGAATGGAAATTTCCGGAGACATTC AGGAATCCATGATGAAAGAA
Product: carbonic anhydrase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 181; Mature: 181
Protein sequence:
>181_residues MHLPNPHKQHPKVSKRAWISETAVIIGNVSIADNVFVGPNAVLRADEPGSSITVQSGSNVQDNVVVHSLSHSEVHIGKNT SLAHGCIVHGPCRIEENCFIGFGAVVFDCNIGKDTLVLHRSVVRGVNISSGKVVPDGSVVTGQGCADTLEGTTKDLNEFK RSVVRANVDLVEGYIRLGEES
Sequences:
>Translated_181_residues MHLPNPHKQHPKVSKRAWISETAVIIGNVSIADNVFVGPNAVLRADEPGSSITVQSGSNVQDNVVVHSLSHSEVHIGKNT SLAHGCIVHGPCRIEENCFIGFGAVVFDCNIGKDTLVLHRSVVRGVNISSGKVVPDGSVVTGQGCADTLEGTTKDLNEFK RSVVRANVDLVEGYIRLGEES >Mature_181_residues MHLPNPHKQHPKVSKRAWISETAVIIGNVSIADNVFVGPNAVLRADEPGSSITVQSGSNVQDNVVVHSLSHSEVHIGKNT SLAHGCIVHGPCRIEENCFIGFGAVVFDCNIGKDTLVLHRSVVRGVNISSGKVVPDGSVVTGQGCADTLEGTTKDLNEFK RSVVRANVDLVEGYIRLGEES
Specific function: Reversible hydration of carbon dioxide. Essential to photosynthetic carbon dioxide fixation [H]
COG id: COG0663
COG function: function code R; Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gamma-class carbonic anhydrase family [H]
Homologues:
Organism=Escherichia coli, GI1787667, Length=108, Percent_Identity=38.8888888888889, Blast_Score=77, Evalue=5e-16, Organism=Escherichia coli, GI87081681, Length=115, Percent_Identity=33.9130434782609, Blast_Score=73, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011004 [H]
Pfam domain/function: NA
EC number: =4.2.1.1 [H]
Molecular weight: Translated: 19270; Mature: 19270
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHLPNPHKQHPKVSKRAWISETAVIIGNVSIADNVFVGPNAVLRADEPGSSITVQSGSNV CCCCCCCCCCCCCHHHHHHCCCEEEEEEEEECCCEEECCCEEEEECCCCCEEEEECCCCC QDNVVVHSLSHSEVHIGKNTSLAHGCIVHGPCRIEENCFIGFGAVVFDCNIGKDTLVLHR CCCEEEEECCCCEEEECCCCCCCCCEEEECCEEECCCEEEEECEEEEECCCCCCHHHHHH SVVRGVNISSGKVVPDGSVVTGQGCADTLEGTTKDLNEFKRSVVRANVDLVEGYIRLGEE HHHHCCCCCCCEECCCCCEEECCCCCHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCC S C >Mature Secondary Structure MHLPNPHKQHPKVSKRAWISETAVIIGNVSIADNVFVGPNAVLRADEPGSSITVQSGSNV CCCCCCCCCCCCCHHHHHHCCCEEEEEEEEECCCEEECCCEEEEECCCCCEEEEECCCCC QDNVVVHSLSHSEVHIGKNTSLAHGCIVHGPCRIEENCFIGFGAVVFDCNIGKDTLVLHR CCCEEEEECCCCEEEECCCCCCCCCEEEECCEEECCCEEEEECEEEEECCCCCCHHHHHH SVVRGVNISSGKVVPDGSVVTGQGCADTLEGTTKDLNEFKRSVVRANVDLVEGYIRLGEE HHHHCCCCCCCEECCCCCEEECCCCCHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCC S C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8041719; 8665839; 10924115 [H]