Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21228210

Identifier: 21228210

GI number: 21228210

Start: 2519608

End: 2521143

Strand: Reverse

Name: 21228210

Synonym: MM_2108

Alternate gene names: NA

Gene position: 2521143-2519608 (Counterclockwise)

Preceding gene: 21228211

Following gene: 21228209

Centisome position: 61.55

GC content: 33.01

Gene sequence:

>1536_bases
ATGGGATTATTGGTAATATTGAATATAGTAATGAGAATTCCCAGCATACCTCATGAGAAGGGTTATGATTCTTTCTTTAT
ACACTCACTTGCAAACTCCGTTGCAAATTTTGGGGTTGCACAGTGGTGGATTAACTGGATGTCTGTCTTTGGGCTGTATC
CTTATTCTTACGCCAGCGCTGTTCCTTTTACACTTTCTGGCATGTCACAACTGACTGGCATAAGGATGGAAATAGTAATA
CTACTTTTCTGCGTACTTCTGGGTCTATTTAGCATATTTGCATCATATTCGTTGGCAACAGTTCTCTATGACAATTTTCT
TCATAGATTTTTATTTGCAGTTATATTTTCTTCGTCTGCAGGCACTCTGAACCTCACAACATGGGAAATAACCACACGTG
CTCAAATCCTGGTTTTCTTTCCATTTTTACTATATTTATTATTTCAAATAATAAAATTTAAAACTAAATTTGTAATGCTT
TTTATTGTGACCGCATTATTGCTACTTGCAACTCACCACTTTGTTTATATGGGATTATTTTATTCAGGCTTGATATTTAT
TGTTGCTCTCATATACAAATTAAATCGAAACCAACCCTTCCAGATTCAAAAAACCCAACTGAGGAACATCAATCTTAATT
ATATGTATATTTCAAGTGTATTTTTTCTCATAATTTTAATTTTCTTATATGGTAGTAAATGGGGTTTAATAACTTCAGGC
TCCAGATATGCCTGGATAATAGATATACTAATGATTACAGGCAGAAATGTGGGATTAACCTTACTACTTTCAATTGGCGC
GCTTATATATTATATATTCAAAAAGGACAAATTGCTGGACGAGTGGGCAATTTTGATTTGTTTAATTCCAACGTTGATAT
TTTCATTTAACCAAACGTATGGATACCTGACCACATATTTATTCGTCACCCTATTAGGGTCCGCAGGACTTTTTAATGTA
ATAAAAAATCAGAAGCAAAATAGAAAAGTTGTAGCTGCTACTGTTGTAATACTTATAATATTAAATATAACATTCTCTAC
TTTTTTTGTTCATTACCGTTTAGGGATAGGGGGAGGAAATAGTGAATGGTATATGAGTGAAGAAACATACAATACAGGAG
AATGGATAAAAGAAAATATTAGCTGGGATAAAAAGGCAGTATCAAATAGCATGCAGGGTAATCGACTGTTTGCGTCTTAT
GGAGGGCAGCCTGTATTATATAGAGATGACATCAGTAATTATATGAATGGATTTGTAACTCTAAATGAGAGTAAAATAGA
GAAAAAGTCACCATTTTCAAAGAGTTTTTATCTAGACAATCCTTATGTTTTAAAATCAGGAACAACTACATCAGGCTTGT
ATAGCTGGATTTCTCAATATCCGATCACTAGTGAAAACTCCCAGAACTTTATAAATGGGAATAATATTTCTTATTTCTAT
GATGATAGTCTAAATTATAATCGTCTGTTTGGCTCATTACCCCAAAGTAAAAATTCAATTTATAACAGTGGAAGAATGCG
GATATGGGAGAATTAA

Upstream 100 bases:

>100_bases
AGGAAAAAACATCTTGAGATCGGAAGATATTATGCAGGAAAATTCAAGTTCAAACTCTGATGTTCAATACAATCCAAGTA
GAAGAACCAAATTTCTGCTA

Downstream 100 bases:

>100_bases
ACTTACGGATGTTTAAAAATGAACTTAATATATTATTATCCAATGGAAAAAGGAGCACCAGCTGAAGTTGGAAGGAATAT
ACTCAAAAAGCTACTTGATC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 511; Mature: 510

Protein sequence:

>511_residues
MGLLVILNIVMRIPSIPHEKGYDSFFIHSLANSVANFGVAQWWINWMSVFGLYPYSYASAVPFTLSGMSQLTGIRMEIVI
LLFCVLLGLFSIFASYSLATVLYDNFLHRFLFAVIFSSSAGTLNLTTWEITTRAQILVFFPFLLYLLFQIIKFKTKFVML
FIVTALLLLATHHFVYMGLFYSGLIFIVALIYKLNRNQPFQIQKTQLRNINLNYMYISSVFFLIILIFLYGSKWGLITSG
SRYAWIIDILMITGRNVGLTLLLSIGALIYYIFKKDKLLDEWAILICLIPTLIFSFNQTYGYLTTYLFVTLLGSAGLFNV
IKNQKQNRKVVAATVVILIILNITFSTFFVHYRLGIGGGNSEWYMSEETYNTGEWIKENISWDKKAVSNSMQGNRLFASY
GGQPVLYRDDISNYMNGFVTLNESKIEKKSPFSKSFYLDNPYVLKSGTTTSGLYSWISQYPITSENSQNFINGNNISYFY
DDSLNYNRLFGSLPQSKNSIYNSGRMRIWEN

Sequences:

>Translated_511_residues
MGLLVILNIVMRIPSIPHEKGYDSFFIHSLANSVANFGVAQWWINWMSVFGLYPYSYASAVPFTLSGMSQLTGIRMEIVI
LLFCVLLGLFSIFASYSLATVLYDNFLHRFLFAVIFSSSAGTLNLTTWEITTRAQILVFFPFLLYLLFQIIKFKTKFVML
FIVTALLLLATHHFVYMGLFYSGLIFIVALIYKLNRNQPFQIQKTQLRNINLNYMYISSVFFLIILIFLYGSKWGLITSG
SRYAWIIDILMITGRNVGLTLLLSIGALIYYIFKKDKLLDEWAILICLIPTLIFSFNQTYGYLTTYLFVTLLGSAGLFNV
IKNQKQNRKVVAATVVILIILNITFSTFFVHYRLGIGGGNSEWYMSEETYNTGEWIKENISWDKKAVSNSMQGNRLFASY
GGQPVLYRDDISNYMNGFVTLNESKIEKKSPFSKSFYLDNPYVLKSGTTTSGLYSWISQYPITSENSQNFINGNNISYFY
DDSLNYNRLFGSLPQSKNSIYNSGRMRIWEN
>Mature_510_residues
GLLVILNIVMRIPSIPHEKGYDSFFIHSLANSVANFGVAQWWINWMSVFGLYPYSYASAVPFTLSGMSQLTGIRMEIVIL
LFCVLLGLFSIFASYSLATVLYDNFLHRFLFAVIFSSSAGTLNLTTWEITTRAQILVFFPFLLYLLFQIIKFKTKFVMLF
IVTALLLLATHHFVYMGLFYSGLIFIVALIYKLNRNQPFQIQKTQLRNINLNYMYISSVFFLIILIFLYGSKWGLITSGS
RYAWIIDILMITGRNVGLTLLLSIGALIYYIFKKDKLLDEWAILICLIPTLIFSFNQTYGYLTTYLFVTLLGSAGLFNVI
KNQKQNRKVVAATVVILIILNITFSTFFVHYRLGIGGGNSEWYMSEETYNTGEWIKENISWDKKAVSNSMQGNRLFASYG
GQPVLYRDDISNYMNGFVTLNESKIEKKSPFSKSFYLDNPYVLKSGTTTSGLYSWISQYPITSENSQNFINGNNISYFYD
DSLNYNRLFGSLPQSKNSIYNSGRMRIWEN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 58667; Mature: 58536

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLLVILNIVMRIPSIPHEKGYDSFFIHSLANSVANFGVAQWWINWMSVFGLYPYSYASA
CHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCC
VPFTLSGMSQLTGIRMEIVILLFCVLLGLFSIFASYSLATVLYDNFLHRFLFAVIFSSSA
CCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
GTLNLTTWEITTRAQILVFFPFLLYLLFQIIKFKTKFVMLFIVTALLLLATHHFVYMGLF
CEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YSGLIFIVALIYKLNRNQPFQIQKTQLRNINLNYMYISSVFFLIILIFLYGSKWGLITSG
HHHHHHHHHHHHHHCCCCCCEEEHHHHHCCCCEEEHHHHHHHHHHHHHHHCCCCCEEECC
SRYAWIIDILMITGRNVGLTLLLSIGALIYYIFKKDKLLDEWAILICLIPTLIFSFNQTY
CCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
GYLTTYLFVTLLGSAGLFNVIKNQKQNRKVVAATVVILIILNITFSTFFVHYRLGIGGGN
HHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCC
SEWYMSEETYNTGEWIKENISWDKKAVSNSMQGNRLFASYGGQPVLYRDDISNYMNGFVT
CCEEECCCCCCCHHHHHHHCCHHHHHHHCCCCCCEEEECCCCCEEEEHHHHHHHCCCEEE
LNESKIEKKSPFSKSFYLDNPYVLKSGTTTSGLYSWISQYPITSENSQNFINGNNISYFY
ECHHHCCCCCCCCCCEECCCCEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEE
DDSLNYNRLFGSLPQSKNSIYNSGRMRIWEN
CCCCCHHHHHCCCCCCHHHHHCCCCEEEECC
>Mature Secondary Structure 
GLLVILNIVMRIPSIPHEKGYDSFFIHSLANSVANFGVAQWWINWMSVFGLYPYSYASA
HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCC
VPFTLSGMSQLTGIRMEIVILLFCVLLGLFSIFASYSLATVLYDNFLHRFLFAVIFSSSA
CCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
GTLNLTTWEITTRAQILVFFPFLLYLLFQIIKFKTKFVMLFIVTALLLLATHHFVYMGLF
CEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YSGLIFIVALIYKLNRNQPFQIQKTQLRNINLNYMYISSVFFLIILIFLYGSKWGLITSG
HHHHHHHHHHHHHHCCCCCCEEEHHHHHCCCCEEEHHHHHHHHHHHHHHHCCCCCEEECC
SRYAWIIDILMITGRNVGLTLLLSIGALIYYIFKKDKLLDEWAILICLIPTLIFSFNQTY
CCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
GYLTTYLFVTLLGSAGLFNVIKNQKQNRKVVAATVVILIILNITFSTFFVHYRLGIGGGN
HHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCC
SEWYMSEETYNTGEWIKENISWDKKAVSNSMQGNRLFASYGGQPVLYRDDISNYMNGFVT
CCEEECCCCCCCHHHHHHHCCHHHHHHHCCCCCCEEEECCCCCEEEEHHHHHHHCCCEEE
LNESKIEKKSPFSKSFYLDNPYVLKSGTTTSGLYSWISQYPITSENSQNFINGNNISYFY
ECHHHCCCCCCCCCCEECCCCEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEE
DDSLNYNRLFGSLPQSKNSIYNSGRMRIWEN
CCCCCHHHHHCCCCCCHHHHHCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA