| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is ggaA [H]
Identifier: 21228204
GI number: 21228204
Start: 2512591
End: 2513574
Strand: Reverse
Name: ggaA [H]
Synonym: MM_2102
Alternate gene names: 21228204
Gene position: 2513574-2512591 (Counterclockwise)
Preceding gene: 21228205
Following gene: 21228203
Centisome position: 61.36
GC content: 32.01
Gene sequence:
>984_bases ATGCAAAATATTAAAGTAAGTATTGTTATACCTACTAAAAATAGGGCAAGTTCCTTGAAAGAGACCCTAGAATCCCTCTT TGTACAAACTTATCCATCTAATAAATACGAAATAATAGTATGTGACGATAATAGTAGTGACAATACTGAGGAAATTGTAA AGGACTTAATAAACAACACACATAATAATTTAAGATATATTAAAGTAAAAAGCAAAATTGAAGGCCCTGCAAAAGTAAGG AATGCAGGTATAATTGGTTCATCAGGTGAGATAATAGGGTTTACTGATGATGACTGCATTGTTTCAAAAAACTGGATAGA AACTGCAGTTGAATGTTTTAAAAAGCACAAAGAAGCTTGTGGTGTTTATGGCACTGTCATAACAGTCGGAAATTGTAAAA ATAAAATGTTTAGAATCTCTCGAAGAGTAGATGTATCAAGTGATAACGGTTCATATGTAACACCAAATGTGTTTTATAAA AAACAGACATTGTTAGATGTTGGTCTATTTGATACAGACATGAGATACATGCAAGATATCGAACTAGGCTGGAGAGTTAG AAAGAAAGGGCCTATAATTTTCGAACCATCTCTCCTCGTAAATCACAAAATTCTTTGTGCATCAATAAGAACATATTTTA GACGTTTAAAAAGAACAGAGTATTGGGTTTTAATGTATAGTAAGCATCCAGAGCATCTGGGAGAAGACAATTTAATTTTA GGTCACCTTTACAATAAAAGCCCAATTTATATAACATCTATACTTTTATGCACTGGATTCTTTCTGTTAGGATCTGAGTT ATTCGTATTATTCCTGGCATTATCTGTAGCGACATATTTATGGGCACATGTTTTTGTGGACGCTAATTATAAAAAATACC CGATCAGATTTTTAATGTTTCCACGATATTCTGCTACAGATTTCATCAGATTTATCTATTCACTAAAAGCCAGTATAAAA TACAAATGCCTAGTTTTGTTCTGA
Upstream 100 bases:
>100_bases ATATTTAATGAATTTATTTTATTTTCATTCTTTAAAGAAAAAAATTACAGATCAGATAATAACAGAATATATAAATATAT GGATTCATTTGTTTTCCTTC
Downstream 100 bases:
>100_bases GGATTTTAAAAATGAGTAAAGTAGAGCTTATTGCTGAAAATACTGCCTTTTTGTTAGTAGGGAAACTTGCTTCTAAACTA ATAAGCTTATTTAGTGTTAT
Product: glycosyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 327; Mature: 327
Protein sequence:
>327_residues MQNIKVSIVIPTKNRASSLKETLESLFVQTYPSNKYEIIVCDDNSSDNTEEIVKDLINNTHNNLRYIKVKSKIEGPAKVR NAGIIGSSGEIIGFTDDDCIVSKNWIETAVECFKKHKEACGVYGTVITVGNCKNKMFRISRRVDVSSDNGSYVTPNVFYK KQTLLDVGLFDTDMRYMQDIELGWRVRKKGPIIFEPSLLVNHKILCASIRTYFRRLKRTEYWVLMYSKHPEHLGEDNLIL GHLYNKSPIYITSILLCTGFFLLGSELFVLFLALSVATYLWAHVFVDANYKKYPIRFLMFPRYSATDFIRFIYSLKASIK YKCLVLF
Sequences:
>Translated_327_residues MQNIKVSIVIPTKNRASSLKETLESLFVQTYPSNKYEIIVCDDNSSDNTEEIVKDLINNTHNNLRYIKVKSKIEGPAKVR NAGIIGSSGEIIGFTDDDCIVSKNWIETAVECFKKHKEACGVYGTVITVGNCKNKMFRISRRVDVSSDNGSYVTPNVFYK KQTLLDVGLFDTDMRYMQDIELGWRVRKKGPIIFEPSLLVNHKILCASIRTYFRRLKRTEYWVLMYSKHPEHLGEDNLIL GHLYNKSPIYITSILLCTGFFLLGSELFVLFLALSVATYLWAHVFVDANYKKYPIRFLMFPRYSATDFIRFIYSLKASIK YKCLVLF >Mature_327_residues MQNIKVSIVIPTKNRASSLKETLESLFVQTYPSNKYEIIVCDDNSSDNTEEIVKDLINNTHNNLRYIKVKSKIEGPAKVR NAGIIGSSGEIIGFTDDDCIVSKNWIETAVECFKKHKEACGVYGTVITVGNCKNKMFRISRRVDVSSDNGSYVTPNVFYK KQTLLDVGLFDTDMRYMQDIELGWRVRKKGPIIFEPSLLVNHKILCASIRTYFRRLKRTEYWVLMYSKHPEHLGEDNLIL GHLYNKSPIYITSILLCTGFFLLGSELFVLFLALSVATYLWAHVFVDANYKKYPIRFLMFPRYSATDFIRFIYSLKASIK YKCLVLF
Specific function: Involved in the biosynthesis of galactosamine-containing minor teichoic acid, a non-essential cell wall polymer in B.subtilis 168 [H]
COG id: COG0463
COG function: function code M; Glycosyltransferases involved in cell wall biogenesis
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 2 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001173 [H]
Pfam domain/function: PF00535 Glycos_transf_2 [H]
EC number: NA
Molecular weight: Translated: 37712; Mature: 37712
Theoretical pI: Translated: 9.40; Mature: 9.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQNIKVSIVIPTKNRASSLKETLESLFVQTYPSNKYEIIVCDDNSSDNTEEIVKDLINNT CCCEEEEEEEECCCHHHHHHHHHHHHHEEECCCCCEEEEEECCCCCCCHHHHHHHHHHCC HNNLRYIKVKSKIEGPAKVRNAGIIGSSGEIIGFTDDDCIVSKNWIETAVECFKKHKEAC CCCEEEEEEECCCCCCHHHCCCCEECCCCCEEEECCCCCEEECHHHHHHHHHHHHHHHHC GVYGTVITVGNCKNKMFRISRRVDVSSDNGSYVTPNVFYKKQTLLDVGLFDTDMRYMQDI CEEEEEEEECCCCCHHEEEEHEEECCCCCCCEECCCEEEEHHHHEEECCCCHHHHHHHHH ELGWRVRKKGPIIFEPSLLVNHKILCASIRTYFRRLKRTEYWVLMYSKHPEHLGEDNLIL HHCEEEECCCCEEECCHHHHCCHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCEEE GHLYNKSPIYITSILLCTGFFLLGSELFVLFLALSVATYLWAHVFVDANYKKYPIRFLMF EEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCEEEEEE PRYSATDFIRFIYSLKASIKYKCLVLF CCCCHHHHHHHHHHHHCCCEEEEEEEC >Mature Secondary Structure MQNIKVSIVIPTKNRASSLKETLESLFVQTYPSNKYEIIVCDDNSSDNTEEIVKDLINNT CCCEEEEEEEECCCHHHHHHHHHHHHHEEECCCCCEEEEEECCCCCCCHHHHHHHHHHCC HNNLRYIKVKSKIEGPAKVRNAGIIGSSGEIIGFTDDDCIVSKNWIETAVECFKKHKEAC CCCEEEEEEECCCCCCHHHCCCCEECCCCCEEEECCCCCEEECHHHHHHHHHHHHHHHHC GVYGTVITVGNCKNKMFRISRRVDVSSDNGSYVTPNVFYKKQTLLDVGLFDTDMRYMQDI CEEEEEEEECCCCCHHEEEEHEEECCCCCCCEECCCEEEEHHHHEEECCCCHHHHHHHHH ELGWRVRKKGPIIFEPSLLVNHKILCASIRTYFRRLKRTEYWVLMYSKHPEHLGEDNLIL HHCEEEECCCCEEECCHHHHCCHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCEEE GHLYNKSPIYITSILLCTGFFLLGSELFVLFLALSVATYLWAHVFVDANYKKYPIRFLMF EEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCEEEEEE PRYSATDFIRFIYSLKASIKYKCLVLF CCCCHHHHHHHHHHHHCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]