Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is ggaA [H]

Identifier: 21228204

GI number: 21228204

Start: 2512591

End: 2513574

Strand: Reverse

Name: ggaA [H]

Synonym: MM_2102

Alternate gene names: 21228204

Gene position: 2513574-2512591 (Counterclockwise)

Preceding gene: 21228205

Following gene: 21228203

Centisome position: 61.36

GC content: 32.01

Gene sequence:

>984_bases
ATGCAAAATATTAAAGTAAGTATTGTTATACCTACTAAAAATAGGGCAAGTTCCTTGAAAGAGACCCTAGAATCCCTCTT
TGTACAAACTTATCCATCTAATAAATACGAAATAATAGTATGTGACGATAATAGTAGTGACAATACTGAGGAAATTGTAA
AGGACTTAATAAACAACACACATAATAATTTAAGATATATTAAAGTAAAAAGCAAAATTGAAGGCCCTGCAAAAGTAAGG
AATGCAGGTATAATTGGTTCATCAGGTGAGATAATAGGGTTTACTGATGATGACTGCATTGTTTCAAAAAACTGGATAGA
AACTGCAGTTGAATGTTTTAAAAAGCACAAAGAAGCTTGTGGTGTTTATGGCACTGTCATAACAGTCGGAAATTGTAAAA
ATAAAATGTTTAGAATCTCTCGAAGAGTAGATGTATCAAGTGATAACGGTTCATATGTAACACCAAATGTGTTTTATAAA
AAACAGACATTGTTAGATGTTGGTCTATTTGATACAGACATGAGATACATGCAAGATATCGAACTAGGCTGGAGAGTTAG
AAAGAAAGGGCCTATAATTTTCGAACCATCTCTCCTCGTAAATCACAAAATTCTTTGTGCATCAATAAGAACATATTTTA
GACGTTTAAAAAGAACAGAGTATTGGGTTTTAATGTATAGTAAGCATCCAGAGCATCTGGGAGAAGACAATTTAATTTTA
GGTCACCTTTACAATAAAAGCCCAATTTATATAACATCTATACTTTTATGCACTGGATTCTTTCTGTTAGGATCTGAGTT
ATTCGTATTATTCCTGGCATTATCTGTAGCGACATATTTATGGGCACATGTTTTTGTGGACGCTAATTATAAAAAATACC
CGATCAGATTTTTAATGTTTCCACGATATTCTGCTACAGATTTCATCAGATTTATCTATTCACTAAAAGCCAGTATAAAA
TACAAATGCCTAGTTTTGTTCTGA

Upstream 100 bases:

>100_bases
ATATTTAATGAATTTATTTTATTTTCATTCTTTAAAGAAAAAAATTACAGATCAGATAATAACAGAATATATAAATATAT
GGATTCATTTGTTTTCCTTC

Downstream 100 bases:

>100_bases
GGATTTTAAAAATGAGTAAAGTAGAGCTTATTGCTGAAAATACTGCCTTTTTGTTAGTAGGGAAACTTGCTTCTAAACTA
ATAAGCTTATTTAGTGTTAT

Product: glycosyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 327; Mature: 327

Protein sequence:

>327_residues
MQNIKVSIVIPTKNRASSLKETLESLFVQTYPSNKYEIIVCDDNSSDNTEEIVKDLINNTHNNLRYIKVKSKIEGPAKVR
NAGIIGSSGEIIGFTDDDCIVSKNWIETAVECFKKHKEACGVYGTVITVGNCKNKMFRISRRVDVSSDNGSYVTPNVFYK
KQTLLDVGLFDTDMRYMQDIELGWRVRKKGPIIFEPSLLVNHKILCASIRTYFRRLKRTEYWVLMYSKHPEHLGEDNLIL
GHLYNKSPIYITSILLCTGFFLLGSELFVLFLALSVATYLWAHVFVDANYKKYPIRFLMFPRYSATDFIRFIYSLKASIK
YKCLVLF

Sequences:

>Translated_327_residues
MQNIKVSIVIPTKNRASSLKETLESLFVQTYPSNKYEIIVCDDNSSDNTEEIVKDLINNTHNNLRYIKVKSKIEGPAKVR
NAGIIGSSGEIIGFTDDDCIVSKNWIETAVECFKKHKEACGVYGTVITVGNCKNKMFRISRRVDVSSDNGSYVTPNVFYK
KQTLLDVGLFDTDMRYMQDIELGWRVRKKGPIIFEPSLLVNHKILCASIRTYFRRLKRTEYWVLMYSKHPEHLGEDNLIL
GHLYNKSPIYITSILLCTGFFLLGSELFVLFLALSVATYLWAHVFVDANYKKYPIRFLMFPRYSATDFIRFIYSLKASIK
YKCLVLF
>Mature_327_residues
MQNIKVSIVIPTKNRASSLKETLESLFVQTYPSNKYEIIVCDDNSSDNTEEIVKDLINNTHNNLRYIKVKSKIEGPAKVR
NAGIIGSSGEIIGFTDDDCIVSKNWIETAVECFKKHKEACGVYGTVITVGNCKNKMFRISRRVDVSSDNGSYVTPNVFYK
KQTLLDVGLFDTDMRYMQDIELGWRVRKKGPIIFEPSLLVNHKILCASIRTYFRRLKRTEYWVLMYSKHPEHLGEDNLIL
GHLYNKSPIYITSILLCTGFFLLGSELFVLFLALSVATYLWAHVFVDANYKKYPIRFLMFPRYSATDFIRFIYSLKASIK
YKCLVLF

Specific function: Involved in the biosynthesis of galactosamine-containing minor teichoic acid, a non-essential cell wall polymer in B.subtilis 168 [H]

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 37712; Mature: 37712

Theoretical pI: Translated: 9.40; Mature: 9.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQNIKVSIVIPTKNRASSLKETLESLFVQTYPSNKYEIIVCDDNSSDNTEEIVKDLINNT
CCCEEEEEEEECCCHHHHHHHHHHHHHEEECCCCCEEEEEECCCCCCCHHHHHHHHHHCC
HNNLRYIKVKSKIEGPAKVRNAGIIGSSGEIIGFTDDDCIVSKNWIETAVECFKKHKEAC
CCCEEEEEEECCCCCCHHHCCCCEECCCCCEEEECCCCCEEECHHHHHHHHHHHHHHHHC
GVYGTVITVGNCKNKMFRISRRVDVSSDNGSYVTPNVFYKKQTLLDVGLFDTDMRYMQDI
CEEEEEEEECCCCCHHEEEEHEEECCCCCCCEECCCEEEEHHHHEEECCCCHHHHHHHHH
ELGWRVRKKGPIIFEPSLLVNHKILCASIRTYFRRLKRTEYWVLMYSKHPEHLGEDNLIL
HHCEEEECCCCEEECCHHHHCCHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCEEE
GHLYNKSPIYITSILLCTGFFLLGSELFVLFLALSVATYLWAHVFVDANYKKYPIRFLMF
EEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCEEEEEE
PRYSATDFIRFIYSLKASIKYKCLVLF
CCCCHHHHHHHHHHHHCCCEEEEEEEC
>Mature Secondary Structure
MQNIKVSIVIPTKNRASSLKETLESLFVQTYPSNKYEIIVCDDNSSDNTEEIVKDLINNT
CCCEEEEEEEECCCHHHHHHHHHHHHHEEECCCCCEEEEEECCCCCCCHHHHHHHHHHCC
HNNLRYIKVKSKIEGPAKVRNAGIIGSSGEIIGFTDDDCIVSKNWIETAVECFKKHKEAC
CCCEEEEEEECCCCCCHHHCCCCEECCCCCEEEECCCCCEEECHHHHHHHHHHHHHHHHC
GVYGTVITVGNCKNKMFRISRRVDVSSDNGSYVTPNVFYKKQTLLDVGLFDTDMRYMQDI
CEEEEEEEECCCCCHHEEEEHEEECCCCCCCEECCCEEEEHHHHEEECCCCHHHHHHHHH
ELGWRVRKKGPIIFEPSLLVNHKILCASIRTYFRRLKRTEYWVLMYSKHPEHLGEDNLIL
HHCEEEECCCCEEECCHHHHCCHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCEEE
GHLYNKSPIYITSILLCTGFFLLGSELFVLFLALSVATYLWAHVFVDANYKKYPIRFLMF
EEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCEEEEEE
PRYSATDFIRFIYSLKASIKYKCLVLF
CCCCHHHHHHHHHHHHCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]