| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21228199
Identifier: 21228199
GI number: 21228199
Start: 2502799
End: 2503362
Strand: Reverse
Name: 21228199
Synonym: MM_2097
Alternate gene names: NA
Gene position: 2503362-2502799 (Counterclockwise)
Preceding gene: 21228200
Following gene: 21228197
Centisome position: 61.11
GC content: 44.33
Gene sequence:
>564_bases ATGAGAAAAAGTATAGTCAGTAAAAGTATAGTCAGCCTAATTACACTAATAGCAATTCTTGCCTTTTTAAGCTCAACTGC AGCAGCTGCATCAAAAGTAACACTTCAGCCGGCATCAAAAAATGTCTATGCAGGGGAAAATATCACATTGAATGTCGTCG TAACTCCGGATACTCAGATCTCAGGCATACAATTTGACCTTGAATATGACGGTTCATTATTCCAGATAGCAGGTGTAACC GAAGGCAACCTGTTCAGCCAGAGCGGTCAGAACACGCTTTTCAGCCCCGGACAGATAGAAAACGGCAAGCTCACTAATGT ATACGGATGTATCCTTGGGAGTTCAAGTGTTTCAACTCCCGAGACCTTTGCAACCGTAACCCTGAAAGCAAACACCGGGG TGCAGGGCACTTCTCAGTTTTACCTGAGAAACGTAACTGTAAGCAGCTCTGCATCAAAGCCTGTGGATGTAAGACTGGTA AACACAGGTATTACAATCTCGGAGCCGGAGGCGAAAAAACCAAGGGGACTGCTGGTGAAACTGATTAAAAGCATTCTGGG TTAA
Upstream 100 bases:
>100_bases TGACAAAAATATTAAGTCGTAAATCATGAAGTAACCTGATTAAAAGGATTAAAAAAATCAAATCGTAACCTTTTAGAAAA ACAAGATGGGAGTGGGATAA
Downstream 100 bases:
>100_bases ATCTGAAGATCTAATTCTTCAGATTCTCAAATTTTCACTTTTGAAATGCCCTGGTTTTTCTAGAATTTTAAAATTTTAAG ACGCTCTAATTTTTTTAACC
Product: hypothetical protein
Products: NA
Alternate protein names: Cellulosome Anchoring Protein; Ig Domain Domain Protein
Number of amino acids: Translated: 187; Mature: 187
Protein sequence:
>187_residues MRKSIVSKSIVSLITLIAILAFLSSTAAAASKVTLQPASKNVYAGENITLNVVVTPDTQISGIQFDLEYDGSLFQIAGVT EGNLFSQSGQNTLFSPGQIENGKLTNVYGCILGSSSVSTPETFATVTLKANTGVQGTSQFYLRNVTVSSSASKPVDVRLV NTGITISEPEAKKPRGLLVKLIKSILG
Sequences:
>Translated_187_residues MRKSIVSKSIVSLITLIAILAFLSSTAAAASKVTLQPASKNVYAGENITLNVVVTPDTQISGIQFDLEYDGSLFQIAGVT EGNLFSQSGQNTLFSPGQIENGKLTNVYGCILGSSSVSTPETFATVTLKANTGVQGTSQFYLRNVTVSSSASKPVDVRLV NTGITISEPEAKKPRGLLVKLIKSILG >Mature_187_residues MRKSIVSKSIVSLITLIAILAFLSSTAAAASKVTLQPASKNVYAGENITLNVVVTPDTQISGIQFDLEYDGSLFQIAGVT EGNLFSQSGQNTLFSPGQIENGKLTNVYGCILGSSSVSTPETFATVTLKANTGVQGTSQFYLRNVTVSSSASKPVDVRLV NTGITISEPEAKKPRGLLVKLIKSILG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19630; Mature: 19630
Theoretical pI: Translated: 9.74; Mature: 9.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKSIVSKSIVSLITLIAILAFLSSTAAAASKVTLQPASKNVYAGENITLNVVVTPDTQI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCEECCCCEEEEEEECCCCCC SGIQFDLEYDGSLFQIAGVTEGNLFSQSGQNTLFSPGQIENGKLTNVYGCILGSSSVSTP CEEEEEEEECCCEEEEECCCCCCEECCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCC ETFATVTLKANTGVQGTSQFYLRNVTVSSSASKPVDVRLVNTGITISEPEAKKPRGLLVK CEEEEEEEEECCCCCCCCEEEEEEEEECCCCCCCEEEEEEECCEEECCCCCCCCHHHHHH LIKSILG HHHHHHC >Mature Secondary Structure MRKSIVSKSIVSLITLIAILAFLSSTAAAASKVTLQPASKNVYAGENITLNVVVTPDTQI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCEECCCCEEEEEEECCCCCC SGIQFDLEYDGSLFQIAGVTEGNLFSQSGQNTLFSPGQIENGKLTNVYGCILGSSSVSTP CEEEEEEEECCCEEEEECCCCCCEECCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCC ETFATVTLKANTGVQGTSQFYLRNVTVSSSASKPVDVRLVNTGITISEPEAKKPRGLLVK CEEEEEEEEECCCCCCCCEEEEEEEEECCCCCCCEEEEEEECCEEECCCCCCCCHHHHHH LIKSILG HHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA