Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21228199

Identifier: 21228199

GI number: 21228199

Start: 2502799

End: 2503362

Strand: Reverse

Name: 21228199

Synonym: MM_2097

Alternate gene names: NA

Gene position: 2503362-2502799 (Counterclockwise)

Preceding gene: 21228200

Following gene: 21228197

Centisome position: 61.11

GC content: 44.33

Gene sequence:

>564_bases
ATGAGAAAAAGTATAGTCAGTAAAAGTATAGTCAGCCTAATTACACTAATAGCAATTCTTGCCTTTTTAAGCTCAACTGC
AGCAGCTGCATCAAAAGTAACACTTCAGCCGGCATCAAAAAATGTCTATGCAGGGGAAAATATCACATTGAATGTCGTCG
TAACTCCGGATACTCAGATCTCAGGCATACAATTTGACCTTGAATATGACGGTTCATTATTCCAGATAGCAGGTGTAACC
GAAGGCAACCTGTTCAGCCAGAGCGGTCAGAACACGCTTTTCAGCCCCGGACAGATAGAAAACGGCAAGCTCACTAATGT
ATACGGATGTATCCTTGGGAGTTCAAGTGTTTCAACTCCCGAGACCTTTGCAACCGTAACCCTGAAAGCAAACACCGGGG
TGCAGGGCACTTCTCAGTTTTACCTGAGAAACGTAACTGTAAGCAGCTCTGCATCAAAGCCTGTGGATGTAAGACTGGTA
AACACAGGTATTACAATCTCGGAGCCGGAGGCGAAAAAACCAAGGGGACTGCTGGTGAAACTGATTAAAAGCATTCTGGG
TTAA

Upstream 100 bases:

>100_bases
TGACAAAAATATTAAGTCGTAAATCATGAAGTAACCTGATTAAAAGGATTAAAAAAATCAAATCGTAACCTTTTAGAAAA
ACAAGATGGGAGTGGGATAA

Downstream 100 bases:

>100_bases
ATCTGAAGATCTAATTCTTCAGATTCTCAAATTTTCACTTTTGAAATGCCCTGGTTTTTCTAGAATTTTAAAATTTTAAG
ACGCTCTAATTTTTTTAACC

Product: hypothetical protein

Products: NA

Alternate protein names: Cellulosome Anchoring Protein; Ig Domain Domain Protein

Number of amino acids: Translated: 187; Mature: 187

Protein sequence:

>187_residues
MRKSIVSKSIVSLITLIAILAFLSSTAAAASKVTLQPASKNVYAGENITLNVVVTPDTQISGIQFDLEYDGSLFQIAGVT
EGNLFSQSGQNTLFSPGQIENGKLTNVYGCILGSSSVSTPETFATVTLKANTGVQGTSQFYLRNVTVSSSASKPVDVRLV
NTGITISEPEAKKPRGLLVKLIKSILG

Sequences:

>Translated_187_residues
MRKSIVSKSIVSLITLIAILAFLSSTAAAASKVTLQPASKNVYAGENITLNVVVTPDTQISGIQFDLEYDGSLFQIAGVT
EGNLFSQSGQNTLFSPGQIENGKLTNVYGCILGSSSVSTPETFATVTLKANTGVQGTSQFYLRNVTVSSSASKPVDVRLV
NTGITISEPEAKKPRGLLVKLIKSILG
>Mature_187_residues
MRKSIVSKSIVSLITLIAILAFLSSTAAAASKVTLQPASKNVYAGENITLNVVVTPDTQISGIQFDLEYDGSLFQIAGVT
EGNLFSQSGQNTLFSPGQIENGKLTNVYGCILGSSSVSTPETFATVTLKANTGVQGTSQFYLRNVTVSSSASKPVDVRLV
NTGITISEPEAKKPRGLLVKLIKSILG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19630; Mature: 19630

Theoretical pI: Translated: 9.74; Mature: 9.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKSIVSKSIVSLITLIAILAFLSSTAAAASKVTLQPASKNVYAGENITLNVVVTPDTQI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCEECCCCEEEEEEECCCCCC
SGIQFDLEYDGSLFQIAGVTEGNLFSQSGQNTLFSPGQIENGKLTNVYGCILGSSSVSTP
CEEEEEEEECCCEEEEECCCCCCEECCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCC
ETFATVTLKANTGVQGTSQFYLRNVTVSSSASKPVDVRLVNTGITISEPEAKKPRGLLVK
CEEEEEEEEECCCCCCCCEEEEEEEEECCCCCCCEEEEEEECCEEECCCCCCCCHHHHHH
LIKSILG
HHHHHHC
>Mature Secondary Structure
MRKSIVSKSIVSLITLIAILAFLSSTAAAASKVTLQPASKNVYAGENITLNVVVTPDTQI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCEECCCCEEEEEEECCCCCC
SGIQFDLEYDGSLFQIAGVTEGNLFSQSGQNTLFSPGQIENGKLTNVYGCILGSSSVSTP
CEEEEEEEECCCEEEEECCCCCCEECCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCC
ETFATVTLKANTGVQGTSQFYLRNVTVSSSASKPVDVRLVNTGITISEPEAKKPRGLLVK
CEEEEEEEEECCCCCCCCEEEEEEEEECCCCCCCEEEEEEECCEEECCCCCCCCHHHHHH
LIKSILG
HHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA