| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is hisC [H]
Identifier: 21228162
GI number: 21228162
Start: 2454369
End: 2455859
Strand: Reverse
Name: hisC [H]
Synonym: MM_2060
Alternate gene names: 21228162
Gene position: 2455859-2454369 (Counterclockwise)
Preceding gene: 21228169
Following gene: 21228161
Centisome position: 59.95
GC content: 46.55
Gene sequence:
>1491_bases GTGTCAGAGCAAAGAAGTGTACCTTTAAGGGAGCATCTGCTGGCCCTGAAGCCCTGCAGACATGGAGGGCTAATCCAGGA AACTTCGGAGACGTACGGGATCCCCGAAAACGAAATCCTCGACTTCAGTGCAAACTTTAACCCACTGGGAAGTCCCTTTG ACTATCCGGAAAACGGGCTAAACTTTGAAGATATTATCAAGAAGAGTTGTGGAAAACTCCTGGAATACCCTGATAACAGG TATGTAGAGTTCAGGGAAGCTGCTGCAAGGTTTGTAGGACTTGGAGTAACACCGCAGAGCATTGTTCCTGGAAACGGTTC AACGGAAATAGTAAGGCTGGTAGTCGAATCCGTGATAGAAAAGGGAGATAAAGTCCTTTTACCCTGGCCCACTTTCGGAG AATACGAAATGCAGTGCCGGATCACAGGAGCTGAACCCGTATGTCCTTCACAGGAAGAAGTAAATACACTCCCTGATGAG GTGCTGGAAGAAGCAAAAATCCTTTTTATCTGTAATCCTAACAACCCCACAGGAAAACTCCGCACCAGGGAAGAACTTAA AGTCCTTGCGGAACGCTGCAGAGAACATAAGACCCTCCTCTATGTGGATGAAGCATTCATAGAGCTTTCAGACCCTTCAC AGAGTGTTGCAGACCTTCCTGCAGAAAATAATTATGTTTTTGTCATGCGTTCCCTTACAAAAGACTTTGCAATTCCCGGA ATCAGAATGGGCTTCGGAATAGCTCCTCCGGCTATGGCTGATATACTTAACACAGCAAGGCTGTCCTGGAACCTGGGAGC TATTGCAAACAATACAGGAATTGCGCTTCTTAATATCGAAGGCGGAATTGACAGCCCTTACCTGAAAAAAGCAAGGGAAA TGATACTCAAAGAAGGAGAAACCCTCAAAGCCAAAATCGATAGGATAAGGGGTTTTGAAGCCGGAGAAGTGAATGTTAAC TTCATACTGGTTGATGTAAGCAAGTTCATGCTTAATTCAAGCGAATTAACTGCACGCCTTGCAGCACGAGGAGTCCTTGT CCGGGACTGTGTTTCCTTTCACGGCCTTGGAAAGAATTACATACGGGTTGCAGTCAGGACAGAAAAAGAAAACGACAGGC TCATTGCTGCAATCGGGGACGTTATCACCGAATGGGGCAGAGAACAGGCAAAGAACGAACTGCAGCACGTAATCGAAAAA GCCAGTGAAGAAGGCATCGGAGGCAGAAAGACCTGCGAATACTATCCGTGCCATTTCGAAGGCCAGAACTGCACATTCTG CTTCTGTCCGTTTTACCCCTGTGAAAACGAAAAAACCGGAGGGAAATGGATACAGAGTTCAAGAGGAGGCAGGGTATGGA GTTGCGTTGACTGCCACCTTGTCCATAAAAAGGAGATAGCCCAGAAAATCCTTGACTGCCTTATGCACGAAGGGGATACT GACGAACTCGTAAAAGTAGCCTGGAAAGAAGTGATGGAGCCTATCTTATGA
Upstream 100 bases:
>100_bases CGCAATCAAATAACCATAAAGCAAATAAAGGCATGTTTGCACGAGCTAATATAATAAACAACTTAATATACAGGCTTCAC GCTAAATATTTGCGATCAAC
Downstream 100 bases:
>100_bases TCATACCGGACAGCGGGCACCTCGCTCTGGTACTTCTGCTAGCTGCAGTCATAGACATAGTTTTCGGGGAACCTCCTGCT GCTGTCCACCCGGTCGTCTG
Product: histidinol-phosphate aminotransferase
Products: NA
Alternate protein names: Imidazole acetol-phosphate transaminase [H]
Number of amino acids: Translated: 496; Mature: 495
Protein sequence:
>496_residues MSEQRSVPLREHLLALKPCRHGGLIQETSETYGIPENEILDFSANFNPLGSPFDYPENGLNFEDIIKKSCGKLLEYPDNR YVEFREAAARFVGLGVTPQSIVPGNGSTEIVRLVVESVIEKGDKVLLPWPTFGEYEMQCRITGAEPVCPSQEEVNTLPDE VLEEAKILFICNPNNPTGKLRTREELKVLAERCREHKTLLYVDEAFIELSDPSQSVADLPAENNYVFVMRSLTKDFAIPG IRMGFGIAPPAMADILNTARLSWNLGAIANNTGIALLNIEGGIDSPYLKKAREMILKEGETLKAKIDRIRGFEAGEVNVN FILVDVSKFMLNSSELTARLAARGVLVRDCVSFHGLGKNYIRVAVRTEKENDRLIAAIGDVITEWGREQAKNELQHVIEK ASEEGIGGRKTCEYYPCHFEGQNCTFCFCPFYPCENEKTGGKWIQSSRGGRVWSCVDCHLVHKKEIAQKILDCLMHEGDT DELVKVAWKEVMEPIL
Sequences:
>Translated_496_residues MSEQRSVPLREHLLALKPCRHGGLIQETSETYGIPENEILDFSANFNPLGSPFDYPENGLNFEDIIKKSCGKLLEYPDNR YVEFREAAARFVGLGVTPQSIVPGNGSTEIVRLVVESVIEKGDKVLLPWPTFGEYEMQCRITGAEPVCPSQEEVNTLPDE VLEEAKILFICNPNNPTGKLRTREELKVLAERCREHKTLLYVDEAFIELSDPSQSVADLPAENNYVFVMRSLTKDFAIPG IRMGFGIAPPAMADILNTARLSWNLGAIANNTGIALLNIEGGIDSPYLKKAREMILKEGETLKAKIDRIRGFEAGEVNVN FILVDVSKFMLNSSELTARLAARGVLVRDCVSFHGLGKNYIRVAVRTEKENDRLIAAIGDVITEWGREQAKNELQHVIEK ASEEGIGGRKTCEYYPCHFEGQNCTFCFCPFYPCENEKTGGKWIQSSRGGRVWSCVDCHLVHKKEIAQKILDCLMHEGDT DELVKVAWKEVMEPIL >Mature_495_residues SEQRSVPLREHLLALKPCRHGGLIQETSETYGIPENEILDFSANFNPLGSPFDYPENGLNFEDIIKKSCGKLLEYPDNRY VEFREAAARFVGLGVTPQSIVPGNGSTEIVRLVVESVIEKGDKVLLPWPTFGEYEMQCRITGAEPVCPSQEEVNTLPDEV LEEAKILFICNPNNPTGKLRTREELKVLAERCREHKTLLYVDEAFIELSDPSQSVADLPAENNYVFVMRSLTKDFAIPGI RMGFGIAPPAMADILNTARLSWNLGAIANNTGIALLNIEGGIDSPYLKKAREMILKEGETLKAKIDRIRGFEAGEVNVNF ILVDVSKFMLNSSELTARLAARGVLVRDCVSFHGLGKNYIRVAVRTEKENDRLIAAIGDVITEWGREQAKNELQHVIEKA SEEGIGGRKTCEYYPCHFEGQNCTFCFCPFYPCENEKTGGKWIQSSRGGRVWSCVDCHLVHKKEIAQKILDCLMHEGDTD ELVKVAWKEVMEPIL
Specific function: Histidine biosynthesis; seventh step. [C]
COG id: COG0079
COG function: function code E; Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily [H]
Homologues:
Organism=Escherichia coli, GI1788332, Length=344, Percent_Identity=26.7441860465116, Blast_Score=99, Evalue=5e-22, Organism=Escherichia coli, GI1788627, Length=164, Percent_Identity=28.0487804878049, Blast_Score=65, Evalue=7e-12, Organism=Caenorhabditis elegans, GI17567369, Length=156, Percent_Identity=29.4871794871795, Blast_Score=69, Evalue=8e-12, Organism=Caenorhabditis elegans, GI71994472, Length=154, Percent_Identity=29.8701298701299, Blast_Score=68, Evalue=1e-11, Organism=Caenorhabditis elegans, GI71994476, Length=154, Percent_Identity=29.8701298701299, Blast_Score=68, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6322075, Length=359, Percent_Identity=25.3481894150418, Blast_Score=77, Evalue=6e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004839 - InterPro: IPR005861 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00155 Aminotran_1_2 [H]
EC number: =2.6.1.9 [H]
Molecular weight: Translated: 55532; Mature: 55401
Theoretical pI: Translated: 4.95; Mature: 4.95
Prosite motif: PS00105 AA_TRANSFER_CLASS_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEQRSVPLREHLLALKPCRHGGLIQETSETYGIPENEILDFSANFNPLGSPFDYPENGL CCCCCCCCHHHHHHHHCCCCCCCCEEECHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCC NFEDIIKKSCGKLLEYPDNRYVEFREAAARFVGLGVTPQSIVPGNGSTEIVRLVVESVIE CHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHH KGDKVLLPWPTFGEYEMQCRITGAEPVCPSQEEVNTLPDEVLEEAKILFICNPNNPTGKL CCCEEEECCCCCCCEEEEEEEECCCCCCCCHHHHHCCHHHHHCCCEEEEEECCCCCCCCC RTREELKVLAERCREHKTLLYVDEAFIELSDPSQSVADLPAENNYVFVMRSLTKDFAIPG CCHHHHHHHHHHHHCCCEEEEEEEEEEEECCCCHHHHCCCCCCCEEEEEEHHHHHHCCCC IRMGFGIAPPAMADILNTARLSWNLGAIANNTGIALLNIEGGIDSPYLKKAREMILKEGE EEECCCCCCHHHHHHHHHHHHEEECCEEECCCCEEEEEECCCCCCHHHHHHHHHHHHCCC TLKAKIDRIRGFEAGEVNVNFILVDVSKFMLNSSELTARLAARGVLVRDCVSFHGLGKNY HHHHHHHHHCCCCCCCEEEEEEEEEEHHHHHCCHHHHHHHHHCCHHHHHHHHHHCCCCCE IRVAVRTEKENDRLIAAIGDVITEWGREQAKNELQHVIEKASEEGIGGRKTCEYYPCHFE EEEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCEEC GQNCTFCFCPFYPCENEKTGGKWIQSSRGGRVWSCVDCHLVHKKEIAQKILDCLMHEGDT CCCCEEEEECCCCCCCCCCCCHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCH DELVKVAWKEVMEPIL HHHHHHHHHHHHHHCC >Mature Secondary Structure SEQRSVPLREHLLALKPCRHGGLIQETSETYGIPENEILDFSANFNPLGSPFDYPENGL CCCCCCCHHHHHHHHCCCCCCCCEEECHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCC NFEDIIKKSCGKLLEYPDNRYVEFREAAARFVGLGVTPQSIVPGNGSTEIVRLVVESVIE CHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHH KGDKVLLPWPTFGEYEMQCRITGAEPVCPSQEEVNTLPDEVLEEAKILFICNPNNPTGKL CCCEEEECCCCCCCEEEEEEEECCCCCCCCHHHHHCCHHHHHCCCEEEEEECCCCCCCCC RTREELKVLAERCREHKTLLYVDEAFIELSDPSQSVADLPAENNYVFVMRSLTKDFAIPG CCHHHHHHHHHHHHCCCEEEEEEEEEEEECCCCHHHHCCCCCCCEEEEEEHHHHHHCCCC IRMGFGIAPPAMADILNTARLSWNLGAIANNTGIALLNIEGGIDSPYLKKAREMILKEGE EEECCCCCCHHHHHHHHHHHHEEECCEEECCCCEEEEEECCCCCCHHHHHHHHHHHHCCC TLKAKIDRIRGFEAGEVNVNFILVDVSKFMLNSSELTARLAARGVLVRDCVSFHGLGKNY HHHHHHHHHCCCCCCCEEEEEEEEEEHHHHHCCHHHHHHHHHCCHHHHHHHHHHCCCCCE IRVAVRTEKENDRLIAAIGDVITEWGREQAKNELQHVIEKASEEGIGGRKTCEYYPCHFE EEEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCEEC GQNCTFCFCPFYPCENEKTGGKWIQSSRGGRVWSCVDCHLVHKKEIAQKILDCLMHEGDT CCCCEEEEECCCCCCCCCCCCHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCH DELVKVAWKEVMEPIL HHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9371463 [H]