| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21228146
Identifier: 21228146
GI number: 21228146
Start: 2440808
End: 2441356
Strand: Reverse
Name: 21228146
Synonym: MM_2044
Alternate gene names: NA
Gene position: 2441356-2440808 (Counterclockwise)
Preceding gene: 21228147
Following gene: 21228144
Centisome position: 59.6
GC content: 36.98
Gene sequence:
>549_bases ATGAACTATAGCAAAATGATAAAGGAAGATTTTGACAGAATTCTTAACTCACGTCTCAATGAAGAAACCCTTCAATCAAT AGTTAATATTCCGGGTGTTTCGGAAATAATATCCAAACATTTCAACAATGATACACTTCTTAAAGAAGAAACTCCCGGGT CAATAATTAATATTCCAGGCGTTTATGAAATCGTATCCAGGCATTTCAATGATGATATTCTTGATGTGTGGGAGTATGAG CAGTACATAAAGGTTAAAGAGATTGTAGAAAGAATCGAATTGTGGAATCCGGAATTCCAGAGAACGATAGTACTGTTAAA TTTACTAAACGAATTAACTGAAATTCTTTACGATACCCTGGATCTAAAACTGGACAAGTATATTAACCTTCGAGCACTTC CGGTCAGGGAGTTCCACAAAGAGGCTGTGGACAAATATGCAGCATACCCTATCTGGACATGTGATTTTGAAGGATCCTGT CTTGTTGGTGCAGAGAAGTTTGAAATAGAATCTATCGATTCAATTCTCCACCGCTTGGGGGATGAGTAA
Upstream 100 bases:
>100_bases TGTTATATTTATGTCATGACCATCCAAAAGAGAAAACTTCATTAAAAATAGATCTTCTCTTTCCGTTGGGATTATTACGC GAGAAATAATGGCGATATAC
Downstream 100 bases:
>100_bases AGGAATGAATAATACTCATTACAAACAAAAGCAAATACACAATGTTATGTAATTCAAAAGATTTCTAATGCTCAAAAGAA GGGGCATTATCATTTGAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 182; Mature: 182
Protein sequence:
>182_residues MNYSKMIKEDFDRILNSRLNEETLQSIVNIPGVSEIISKHFNNDTLLKEETPGSIINIPGVYEIVSRHFNDDILDVWEYE QYIKVKEIVERIELWNPEFQRTIVLLNLLNELTEILYDTLDLKLDKYINLRALPVREFHKEAVDKYAAYPIWTCDFEGSC LVGAEKFEIESIDSILHRLGDE
Sequences:
>Translated_182_residues MNYSKMIKEDFDRILNSRLNEETLQSIVNIPGVSEIISKHFNNDTLLKEETPGSIINIPGVYEIVSRHFNDDILDVWEYE QYIKVKEIVERIELWNPEFQRTIVLLNLLNELTEILYDTLDLKLDKYINLRALPVREFHKEAVDKYAAYPIWTCDFEGSC LVGAEKFEIESIDSILHRLGDE >Mature_182_residues MNYSKMIKEDFDRILNSRLNEETLQSIVNIPGVSEIISKHFNNDTLLKEETPGSIINIPGVYEIVSRHFNDDILDVWEYE QYIKVKEIVERIELWNPEFQRTIVLLNLLNELTEILYDTLDLKLDKYINLRALPVREFHKEAVDKYAAYPIWTCDFEGSC LVGAEKFEIESIDSILHRLGDE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21382; Mature: 21382
Theoretical pI: Translated: 4.32; Mature: 4.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNYSKMIKEDFDRILNSRLNEETLQSIVNIPGVSEIISKHFNNDTLLKEETPGSIINIPG CCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCEEECCH VYEIVSRHFNDDILDVWEYEQYIKVKEIVERIELWNPEFQRTIVLLNLLNELTEILYDTL HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH DLKLDKYINLRALPVREFHKEAVDKYAAYPIWTCDFEGSCLVGAEKFEIESIDSILHRLG HHHHHHHCCCEECCHHHHHHHHHHHHHCCCEEEECCCCCEEECCHHHHHHHHHHHHHHHC DE CC >Mature Secondary Structure MNYSKMIKEDFDRILNSRLNEETLQSIVNIPGVSEIISKHFNNDTLLKEETPGSIINIPG CCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCEEECCH VYEIVSRHFNDDILDVWEYEQYIKVKEIVERIELWNPEFQRTIVLLNLLNELTEILYDTL HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH DLKLDKYINLRALPVREFHKEAVDKYAAYPIWTCDFEGSCLVGAEKFEIESIDSILHRLG HHHHHHHCCCEECCHHHHHHHHHHHHHCCCEEEECCCCCEEECCHHHHHHHHHHHHHHHC DE CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA