Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

Click here to switch to the map view.

The map label for this gene is 21228128

Identifier: 21228128

GI number: 21228128

Start: 2419617

End: 2420204

Strand: Direct

Name: 21228128

Synonym: MM_2026

Alternate gene names: NA

Gene position: 2419617-2420204 (Clockwise)

Preceding gene: 21228127

Following gene: 21228131

Centisome position: 59.07

GC content: 35.2

Gene sequence:

>588_bases
TTGATTAGACTAGATGATTCTGAAGGAAGGCTGGGACCTAATACCAAAGTTTTGTTTGGTACTATTTTTGATGAATATGT
AAAATCCTCATCGAGAATTATTACTAAAGGAACCGAAAATAATGTTCCAAAATATGTTATTGAAAGTGATCCTTTTATAG
ATATCAGAGCTGGACTTTTTTGGATTTCGAATGATGGAACAATCGTTTTTGCTAGAAAAGAGGGTAGAACTTTTGGTTCG
AATGCTATAAGTAGAGCGTTGGGTGTGGGTGTCAATCCTATAAAAATTAACATCAAAAAAGTTGCAGATGACTTTACAGA
TAACTGGATAGGAAGCATTGTGGGCAGGGAGGGGAATTGGCAGAAAGGAACTTTACACGGTGATAATCTCCGGGCTGATG
ATTGTGTTGGTGCAGAGTTTACTGCTTGTGCAAAGAATCAGTTGGGAGGATATACAGGGAATTTTGGCGGAAGCATTAAA
TTTAAAGTAACAAAAGAAGGTGTAATTACATTATATACTGATTTAAATGAAGACATTGGAAACTTTTTGCGTTTTGTAAA
CGACGAAATTAAAGTTTACTTTGAATGA

Upstream 100 bases:

>100_bases
ATTTGAATTGACTGAAGAGCTTAAGGATATAAAGAAATTACGAGATAAATTGGATAATTTCTTCATTGCAAGAACAGAAG
ACGGACAAACGTTAAATTCA

Downstream 100 bases:

>100_bases
AGAATTTTATATGGGTAATTAATATCCTATGTATTTTCGGATATTATCCATTAAATAATGAGATTCTCCCAATCTTATTT
TTATGTTTTGTTTAAAAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 195; Mature: 195

Protein sequence:

>195_residues
MIRLDDSEGRLGPNTKVLFGTIFDEYVKSSSRIITKGTENNVPKYVIESDPFIDIRAGLFWISNDGTIVFARKEGRTFGS
NAISRALGVGVNPIKINIKKVADDFTDNWIGSIVGREGNWQKGTLHGDNLRADDCVGAEFTACAKNQLGGYTGNFGGSIK
FKVTKEGVITLYTDLNEDIGNFLRFVNDEIKVYFE

Sequences:

>Translated_195_residues
MIRLDDSEGRLGPNTKVLFGTIFDEYVKSSSRIITKGTENNVPKYVIESDPFIDIRAGLFWISNDGTIVFARKEGRTFGS
NAISRALGVGVNPIKINIKKVADDFTDNWIGSIVGREGNWQKGTLHGDNLRADDCVGAEFTACAKNQLGGYTGNFGGSIK
FKVTKEGVITLYTDLNEDIGNFLRFVNDEIKVYFE
>Mature_195_residues
MIRLDDSEGRLGPNTKVLFGTIFDEYVKSSSRIITKGTENNVPKYVIESDPFIDIRAGLFWISNDGTIVFARKEGRTFGS
NAISRALGVGVNPIKINIKKVADDFTDNWIGSIVGREGNWQKGTLHGDNLRADDCVGAEFTACAKNQLGGYTGNFGGSIK
FKVTKEGVITLYTDLNEDIGNFLRFVNDEIKVYFE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21560; Mature: 21560

Theoretical pI: Translated: 5.37; Mature: 5.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRLDDSEGRLGPNTKVLFGTIFDEYVKSSSRIITKGTENNVPKYVIESDPFIDIRAGLF
CEEECCCCCCCCCCCEEEEEHHHHHHHCCCCEEEEECCCCCCCEEEECCCCEEEEEEEEE
WISNDGTIVFARKEGRTFGSNAISRALGVGVNPIKINIKKVADDFTDNWIGSIVGREGNW
EEECCCEEEEEECCCCCCCHHHHHHHHCCCCCEEEEEEEEHHCHHCCHHHHHHCCCCCCC
QKGTLHGDNLRADDCVGAEFTACAKNQLGGYTGNFGGSIKFKVTKEGVITLYTDLNEDIG
CCCCEECCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCEEEEEEECCCEEEEEECCCHHHH
NFLRFVNDEIKVYFE
HHHHHCCCEEEEEEC
>Mature Secondary Structure
MIRLDDSEGRLGPNTKVLFGTIFDEYVKSSSRIITKGTENNVPKYVIESDPFIDIRAGLF
CEEECCCCCCCCCCCEEEEEHHHHHHHCCCCEEEEECCCCCCCEEEECCCCEEEEEEEEE
WISNDGTIVFARKEGRTFGSNAISRALGVGVNPIKINIKKVADDFTDNWIGSIVGREGNW
EEECCCEEEEEECCCCCCCHHHHHHHHCCCCCEEEEEEEEHHCHHCCHHHHHHCCCCCCC
QKGTLHGDNLRADDCVGAEFTACAKNQLGGYTGNFGGSIKFKVTKEGVITLYTDLNEDIG
CCCCEECCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCEEEEEEECCCEEEEEECCCHHHH
NFLRFVNDEIKVYFE
HHHHHCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA