| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21228128
Identifier: 21228128
GI number: 21228128
Start: 2419617
End: 2420204
Strand: Direct
Name: 21228128
Synonym: MM_2026
Alternate gene names: NA
Gene position: 2419617-2420204 (Clockwise)
Preceding gene: 21228127
Following gene: 21228131
Centisome position: 59.07
GC content: 35.2
Gene sequence:
>588_bases TTGATTAGACTAGATGATTCTGAAGGAAGGCTGGGACCTAATACCAAAGTTTTGTTTGGTACTATTTTTGATGAATATGT AAAATCCTCATCGAGAATTATTACTAAAGGAACCGAAAATAATGTTCCAAAATATGTTATTGAAAGTGATCCTTTTATAG ATATCAGAGCTGGACTTTTTTGGATTTCGAATGATGGAACAATCGTTTTTGCTAGAAAAGAGGGTAGAACTTTTGGTTCG AATGCTATAAGTAGAGCGTTGGGTGTGGGTGTCAATCCTATAAAAATTAACATCAAAAAAGTTGCAGATGACTTTACAGA TAACTGGATAGGAAGCATTGTGGGCAGGGAGGGGAATTGGCAGAAAGGAACTTTACACGGTGATAATCTCCGGGCTGATG ATTGTGTTGGTGCAGAGTTTACTGCTTGTGCAAAGAATCAGTTGGGAGGATATACAGGGAATTTTGGCGGAAGCATTAAA TTTAAAGTAACAAAAGAAGGTGTAATTACATTATATACTGATTTAAATGAAGACATTGGAAACTTTTTGCGTTTTGTAAA CGACGAAATTAAAGTTTACTTTGAATGA
Upstream 100 bases:
>100_bases ATTTGAATTGACTGAAGAGCTTAAGGATATAAAGAAATTACGAGATAAATTGGATAATTTCTTCATTGCAAGAACAGAAG ACGGACAAACGTTAAATTCA
Downstream 100 bases:
>100_bases AGAATTTTATATGGGTAATTAATATCCTATGTATTTTCGGATATTATCCATTAAATAATGAGATTCTCCCAATCTTATTT TTATGTTTTGTTTAAAAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 195; Mature: 195
Protein sequence:
>195_residues MIRLDDSEGRLGPNTKVLFGTIFDEYVKSSSRIITKGTENNVPKYVIESDPFIDIRAGLFWISNDGTIVFARKEGRTFGS NAISRALGVGVNPIKINIKKVADDFTDNWIGSIVGREGNWQKGTLHGDNLRADDCVGAEFTACAKNQLGGYTGNFGGSIK FKVTKEGVITLYTDLNEDIGNFLRFVNDEIKVYFE
Sequences:
>Translated_195_residues MIRLDDSEGRLGPNTKVLFGTIFDEYVKSSSRIITKGTENNVPKYVIESDPFIDIRAGLFWISNDGTIVFARKEGRTFGS NAISRALGVGVNPIKINIKKVADDFTDNWIGSIVGREGNWQKGTLHGDNLRADDCVGAEFTACAKNQLGGYTGNFGGSIK FKVTKEGVITLYTDLNEDIGNFLRFVNDEIKVYFE >Mature_195_residues MIRLDDSEGRLGPNTKVLFGTIFDEYVKSSSRIITKGTENNVPKYVIESDPFIDIRAGLFWISNDGTIVFARKEGRTFGS NAISRALGVGVNPIKINIKKVADDFTDNWIGSIVGREGNWQKGTLHGDNLRADDCVGAEFTACAKNQLGGYTGNFGGSIK FKVTKEGVITLYTDLNEDIGNFLRFVNDEIKVYFE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21560; Mature: 21560
Theoretical pI: Translated: 5.37; Mature: 5.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRLDDSEGRLGPNTKVLFGTIFDEYVKSSSRIITKGTENNVPKYVIESDPFIDIRAGLF CEEECCCCCCCCCCCEEEEEHHHHHHHCCCCEEEEECCCCCCCEEEECCCCEEEEEEEEE WISNDGTIVFARKEGRTFGSNAISRALGVGVNPIKINIKKVADDFTDNWIGSIVGREGNW EEECCCEEEEEECCCCCCCHHHHHHHHCCCCCEEEEEEEEHHCHHCCHHHHHHCCCCCCC QKGTLHGDNLRADDCVGAEFTACAKNQLGGYTGNFGGSIKFKVTKEGVITLYTDLNEDIG CCCCEECCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCEEEEEEECCCEEEEEECCCHHHH NFLRFVNDEIKVYFE HHHHHCCCEEEEEEC >Mature Secondary Structure MIRLDDSEGRLGPNTKVLFGTIFDEYVKSSSRIITKGTENNVPKYVIESDPFIDIRAGLF CEEECCCCCCCCCCCEEEEEHHHHHHHCCCCEEEEECCCCCCCEEEECCCCEEEEEEEEE WISNDGTIVFARKEGRTFGSNAISRALGVGVNPIKINIKKVADDFTDNWIGSIVGREGNW EEECCCEEEEEECCCCCCCHHHHHHHHCCCCCEEEEEEEEHHCHHCCHHHHHHCCCCCCC QKGTLHGDNLRADDCVGAEFTACAKNQLGGYTGNFGGSIKFKVTKEGVITLYTDLNEDIG CCCCEECCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCEEEEEEECCCEEEEEECCCHHHH NFLRFVNDEIKVYFE HHHHHCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA