| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is pstS [H]
Identifier: 21228107
GI number: 21228107
Start: 2392304
End: 2393212
Strand: Direct
Name: pstS [H]
Synonym: MM_2005
Alternate gene names: 21228107
Gene position: 2392304-2393212 (Clockwise)
Preceding gene: 21228106
Following gene: 21228108
Centisome position: 58.4
GC content: 46.75
Gene sequence:
>909_bases ATGGTAAATAAATTAAAAACATATGCAATCCTCACGTTACTGGTGTTTGGACTTGTATTTCTGGGAATTGGATGTACCGG AAATGAAAATGGCGAAAGTTCTTCTCAGGGTGAAGAAACCTCTTCAGGGGAAGTTCCCGGGGCTGAATCCCGGAGTATTA CTCTGAAAGGTTCAGATACGGTTCTCCCCCTTGCTCAGGCTGAAGCTGAAGAATTCATGCTTGAAAACCCTGACAAAAGT GTAACTGTCACCGGTGGTGGGTCGGGTGTTGGGATTACAGCTCTCATTGATGGTGAAGTCGACATTGCTGCAGCATCCCG AGAAATTAAAGCCGAAGAAATAGAAGCTGCTCAGTCTAACGGCATCACCCCTGTGGAGACAACAATTGCCTATGACGGCA TTTCAGTTGTTGTTAACCCCGGGAACCCTGTTTCTGAACTTACCTTTGACCAGCTGCGCGGCATCTACAATGGAAGCATC AGCAACTGGAAGGACGTAGGTGGAGAAGACAGGAAGATTGTGGTGATTTCCAGGGACAGCAGTTCAGGTACTTACGAATA TTTCAAGGAAGAGGTTTTACAGGGAGATGAATATAGACCTGATGCACTTACCCAGCCTGCAACAGGGGGAATAGTTGGGG AAGTTTCTCAGAATCCCAATGCAATCGGATATATCGGTGTTGCATACCTTGATCAAAGTGTAAAAGCCTTAAGCCTGGAT GCAGGAAACGGCCCTGAAACCCCAAGTCCTGAAAACATCCTCAGCGGTGCATACCCTCTTTCAAGGTCTCTTTACTTCTA CACCAATGGTGAACCCTCAGGCTTGACAAAGGAGTTCGTTGACTTTGTACTCAGCGAAACAGGACAGAGCCTGGTAACTG AAGTAGGGTACTTCCCTGCAGATCAGTAA
Upstream 100 bases:
>100_bases TTATATATTTCTCTCTTTTTATTACCTCCTGTACGATAAATGATATTGTAGATTATAGATTGTTAGTTTATTGTTATTTG TTTAATGGAGTATGTGTAAC
Downstream 100 bases:
>100_bases TAAAAGCCTACAAGCTGTTACAGTAAAACCACTTTAAGGTAAAAACATGTTTAGCAGGAATTATAAGGAGAAGACGATTG AGTCGGTGCTTTTCTCAGTA
Product: phosphate-binding protein
Products: ADP; phosphate [Cytoplasm]; phosphate [Cytoplasm] [C]
Alternate protein names: PBP [H]
Number of amino acids: Translated: 302; Mature: 302
Protein sequence:
>302_residues MVNKLKTYAILTLLVFGLVFLGIGCTGNENGESSSQGEETSSGEVPGAESRSITLKGSDTVLPLAQAEAEEFMLENPDKS VTVTGGGSGVGITALIDGEVDIAAASREIKAEEIEAAQSNGITPVETTIAYDGISVVVNPGNPVSELTFDQLRGIYNGSI SNWKDVGGEDRKIVVISRDSSSGTYEYFKEEVLQGDEYRPDALTQPATGGIVGEVSQNPNAIGYIGVAYLDQSVKALSLD AGNGPETPSPENILSGAYPLSRSLYFYTNGEPSGLTKEFVDFVLSETGQSLVTEVGYFPADQ
Sequences:
>Translated_302_residues MVNKLKTYAILTLLVFGLVFLGIGCTGNENGESSSQGEETSSGEVPGAESRSITLKGSDTVLPLAQAEAEEFMLENPDKS VTVTGGGSGVGITALIDGEVDIAAASREIKAEEIEAAQSNGITPVETTIAYDGISVVVNPGNPVSELTFDQLRGIYNGSI SNWKDVGGEDRKIVVISRDSSSGTYEYFKEEVLQGDEYRPDALTQPATGGIVGEVSQNPNAIGYIGVAYLDQSVKALSLD AGNGPETPSPENILSGAYPLSRSLYFYTNGEPSGLTKEFVDFVLSETGQSLVTEVGYFPADQ >Mature_302_residues MVNKLKTYAILTLLVFGLVFLGIGCTGNENGESSSQGEETSSGEVPGAESRSITLKGSDTVLPLAQAEAEEFMLENPDKS VTVTGGGSGVGITALIDGEVDIAAASREIKAEEIEAAQSNGITPVETTIAYDGISVVVNPGNPVSELTFDQLRGIYNGSI SNWKDVGGEDRKIVVISRDSSSGTYEYFKEEVLQGDEYRPDALTQPATGGIVGEVSQNPNAIGYIGVAYLDQSVKALSLD AGNGPETPSPENILSGAYPLSRSLYFYTNGEPSGLTKEFVDFVLSETGQSLVTEVGYFPADQ
Specific function: Part of the ABC transporter complex pstSACB involved in phosphate import [H]
COG id: COG0226
COG function: function code P; ABC-type phosphate transport system, periplasmic component
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pstS family [H]
Homologues:
None
Paralogues:
None
Copy number: 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011862 - InterPro: IPR006059 [H]
Pfam domain/function: PF01547 SBP_bac_1 [H]
EC number: NA
Molecular weight: Translated: 31759; Mature: 31759
Theoretical pI: Translated: 3.84; Mature: 3.84
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVNKLKTYAILTLLVFGLVFLGIGCTGNENGESSSQGEETSSGEVPGAESRSITLKGSDT CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCC VLPLAQAEAEEFMLENPDKSVTVTGGGSGVGITALIDGEVDIAAASREIKAEEIEAAQSN EEEHHHHHHHHHHHCCCCCEEEEECCCCCEEEEEEECCCEEEEECCCHHHHHHHHHHHCC GITPVETTIAYDGISVVVNPGNPVSELTFDQLRGIYNGSISNWKDVGGEDRKIVVISRDS CCCCCEEEEEECCEEEEECCCCCHHHHHHHHHHHHHCCCCCCHHHCCCCCCEEEEEECCC SSGTYEYFKEEVLQGDEYRPDALTQPATGGIVGEVSQNPNAIGYIGVAYLDQSVKALSLD CCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCCEEEEEHHHHCCCCEEEEEE AGNGPETPSPENILSGAYPLSRSLYFYTNGEPSGLTKEFVDFVLSETGQSLVTEVGYFPA CCCCCCCCCHHHHHCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCHHHHHHHCCCCC DQ CC >Mature Secondary Structure MVNKLKTYAILTLLVFGLVFLGIGCTGNENGESSSQGEETSSGEVPGAESRSITLKGSDT CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCC VLPLAQAEAEEFMLENPDKSVTVTGGGSGVGITALIDGEVDIAAASREIKAEEIEAAQSN EEEHHHHHHHHHHHCCCCCEEEEECCCCCEEEEEEECCCEEEEECCCHHHHHHHHHHHCC GITPVETTIAYDGISVVVNPGNPVSELTFDQLRGIYNGSISNWKDVGGEDRKIVVISRDS CCCCCEEEEEECCEEEEECCCCCHHHHHHHHHHHHHCCCCCCHHHCCCCCCEEEEEECCC SSGTYEYFKEEVLQGDEYRPDALTQPATGGIVGEVSQNPNAIGYIGVAYLDQSVKALSLD CCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCCEEEEEHHHHCCCCEEEEEE AGNGPETPSPENILSGAYPLSRSLYFYTNGEPSGLTKEFVDFVLSETGQSLVTEVGYFPA CCCCCCCCCHHHHHCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCHHHHHHHCCCCC DQ CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; phosphate [Periplasm]; H2O [C]
Specific reaction: ATP + phosphate [Periplasm] + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8760913; 8969508; 9384377 [H]