Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

Click here to switch to the map view.

The map label for this gene is 21228099

Identifier: 21228099

GI number: 21228099

Start: 2375266

End: 2376840

Strand: Reverse

Name: 21228099

Synonym: MM_1997

Alternate gene names: NA

Gene position: 2376840-2375266 (Counterclockwise)

Preceding gene: 21228100

Following gene: 21228098

Centisome position: 58.02

GC content: 47.24

Gene sequence:

>1575_bases
ATGAAAAACATAGCTTTTATCCTTCTCGTACTGATGCTTGTCTTACAGCCAGCCACAGCCCGGGCGCAGGAGGATTTTGA
ACCAGAAGAGATGACCTCATTTATGATTCAGGTCCCGCACGGCGTGGATGGAAGTGGGCTTGCAGTCGGAGGCAGTAACC
TCTCTGCATACGTCTTTTTTGAGAGCTATTACAGCGGGGATATGAATGTAACACTGGAGCTTGATTTACCTGAGGGTTTC
GTACTCCAGGATACGCCTGTCCATTCTTTTTCGCTTCAGACCGAATATGATGACTGGTACAGGCTCGTGGATATCTATAT
TCCGGAGGATTTGCATTCCGGGACATATGATATAACTGCAACTGCAGTTGTTGATGTTAATGGAAATGAGCATACAATTG
TACGCAGAACCCGGCTCAGGGTTGCTTCAAAAGAGGAAGTTGCAGACGAGATCACAATAACCGGAGTGATCGTCCCTTCA
GATGAGGACGGATATGGTGATCCGAGCCATCCTTCCAATACCCTGGTAATCCGGGAAACATCTCCAGCTCTCAAAAAGCT
TCTTAAGGTTACGGACCTCCGGATCGACAGGAAGGAGCTCACTTCAACCTTTATGGGAGTTGAGGTTTCCAATAAAGGAG
AAAACACAGTCCCTGTCGTTATCACCTATGATATCCTTGATATCAGGACAGGCGAGCCTGTAAAAACCTTCAAGCCCACA
ATTCTGGGAATGAATGCAGATACCTTCTGCTATGCTGCGTTAACACTTCCTCCAGGCTCGAGCTCGCTGGTAAGCCTTCC
ACTCTACGTATCCGATAATGCGATGGGAGGGAACTACCTGTTGAGGGTAAAAGTAAAGATCACAGGAAGCGACTGGGTTG
CAGTAACAGAGGACCAGAAAATAACTGCAGTATCAAGGAAATGGGGACCTATAATGATTACATTTGCCTCCGCACTACTC
GGACTGACCGCAGTTAGCCTCTTTTTCTCAAGGTCAAAGGAGATAATGGACAGGTTCAAAACCCGCAACCTCGTGATGAT
TTCCCTTTTCGGCACCGTTTCTTTTGCAGCCATAAACCTGCCAATGACTATACTGTGGGAGCTGTCGCACGCCATATTCG
GGCCTTTCAGTTTTCTTTTTACCGGGCTCTTTCATGAAGTCCTTCTTTACATGCTCATTGCCTCCCTTGTTGTCCTGATC
CCAAAGCCAGGGGTTATAAGCCTTTTCATGGTGGTCAGGTTCCTTCTCGGGGGCTTTATAACAGGAAGCTTCACCCCGAT
TACTTTTATAACATTATCCCTGAGTGCGGTAATTCTGGAGTCCATGATGTATGTTACTGGCATAACCGGCAAAACCCCGG
ACCCGGAAAACAGGATAAGGATGGGAGTTGTCTGTGGAATTGCGGACATGGTCAGCGGGTATGCGTCATTCAGTGTGTGG
ATGGTGCTTTATCGGCTGTTTTACAGCAACTGGTACATAATGGCTAATATCCTGATCGACGGGTTCCTCTACACCTTCAT
AGGAGCCTGGTTCGGGATAAGCCTTGGAAACAGACTGAAAAAGGTAGCAGAATAA

Upstream 100 bases:

>100_bases
TTCAGGGTGGGTCTGTTGATATCGTGAGTTTTGAAGATGTCCCTGACTGGGACAGGAAAATGCAGGAAATCCGGAAAATC
CTCAGATAAAGGGCTGCGGA

Downstream 100 bases:

>100_bases
GGCGGGAAAATAAAAGTCGCAGAATAGGGCTGTGAAGTGAGAGGATGATAAAGTGAATCAGAACAGGGGCAGTACAATAA
TAGAGATCAGGGACCTGTGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 524; Mature: 524

Protein sequence:

>524_residues
MKNIAFILLVLMLVLQPATARAQEDFEPEEMTSFMIQVPHGVDGSGLAVGGSNLSAYVFFESYYSGDMNVTLELDLPEGF
VLQDTPVHSFSLQTEYDDWYRLVDIYIPEDLHSGTYDITATAVVDVNGNEHTIVRRTRLRVASKEEVADEITITGVIVPS
DEDGYGDPSHPSNTLVIRETSPALKKLLKVTDLRIDRKELTSTFMGVEVSNKGENTVPVVITYDILDIRTGEPVKTFKPT
ILGMNADTFCYAALTLPPGSSSLVSLPLYVSDNAMGGNYLLRVKVKITGSDWVAVTEDQKITAVSRKWGPIMITFASALL
GLTAVSLFFSRSKEIMDRFKTRNLVMISLFGTVSFAAINLPMTILWELSHAIFGPFSFLFTGLFHEVLLYMLIASLVVLI
PKPGVISLFMVVRFLLGGFITGSFTPITFITLSLSAVILESMMYVTGITGKTPDPENRIRMGVVCGIADMVSGYASFSVW
MVLYRLFYSNWYIMANILIDGFLYTFIGAWFGISLGNRLKKVAE

Sequences:

>Translated_524_residues
MKNIAFILLVLMLVLQPATARAQEDFEPEEMTSFMIQVPHGVDGSGLAVGGSNLSAYVFFESYYSGDMNVTLELDLPEGF
VLQDTPVHSFSLQTEYDDWYRLVDIYIPEDLHSGTYDITATAVVDVNGNEHTIVRRTRLRVASKEEVADEITITGVIVPS
DEDGYGDPSHPSNTLVIRETSPALKKLLKVTDLRIDRKELTSTFMGVEVSNKGENTVPVVITYDILDIRTGEPVKTFKPT
ILGMNADTFCYAALTLPPGSSSLVSLPLYVSDNAMGGNYLLRVKVKITGSDWVAVTEDQKITAVSRKWGPIMITFASALL
GLTAVSLFFSRSKEIMDRFKTRNLVMISLFGTVSFAAINLPMTILWELSHAIFGPFSFLFTGLFHEVLLYMLIASLVVLI
PKPGVISLFMVVRFLLGGFITGSFTPITFITLSLSAVILESMMYVTGITGKTPDPENRIRMGVVCGIADMVSGYASFSVW
MVLYRLFYSNWYIMANILIDGFLYTFIGAWFGISLGNRLKKVAE
>Mature_524_residues
MKNIAFILLVLMLVLQPATARAQEDFEPEEMTSFMIQVPHGVDGSGLAVGGSNLSAYVFFESYYSGDMNVTLELDLPEGF
VLQDTPVHSFSLQTEYDDWYRLVDIYIPEDLHSGTYDITATAVVDVNGNEHTIVRRTRLRVASKEEVADEITITGVIVPS
DEDGYGDPSHPSNTLVIRETSPALKKLLKVTDLRIDRKELTSTFMGVEVSNKGENTVPVVITYDILDIRTGEPVKTFKPT
ILGMNADTFCYAALTLPPGSSSLVSLPLYVSDNAMGGNYLLRVKVKITGSDWVAVTEDQKITAVSRKWGPIMITFASALL
GLTAVSLFFSRSKEIMDRFKTRNLVMISLFGTVSFAAINLPMTILWELSHAIFGPFSFLFTGLFHEVLLYMLIASLVVLI
PKPGVISLFMVVRFLLGGFITGSFTPITFITLSLSAVILESMMYVTGITGKTPDPENRIRMGVVCGIADMVSGYASFSVW
MVLYRLFYSNWYIMANILIDGFLYTFIGAWFGISLGNRLKKVAE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 57987; Mature: 57987

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNIAFILLVLMLVLQPATARAQEDFEPEEMTSFMIQVPHGVDGSGLAVGGSNLSAYVFF
CCHHHHHHHHHHHHCCCCCHHHCCCCCHHHHHEEEEECCCCCCCCCEEECCCCCEEEEEE
ESYYSGDMNVTLELDLPEGFVLQDTPVHSFSLQTEYDDWYRLVDIYIPEDLHSGTYDITA
EEECCCCEEEEEEEECCCCEEEECCCCCEEEEECCCCCEEEEEEEEECCCCCCCCEEEEE
TAVVDVNGNEHTIVRRTRLRVASKEEVADEITITGVIVPSDEDGYGDPSHPSNTLVIRET
EEEEEECCCCEEEEEEHHHHHCCHHHHCCEEEEEEEEEECCCCCCCCCCCCCCEEEEEEC
SPALKKLLKVTDLRIDRKELTSTFMGVEVSNKGENTVPVVITYDILDIRTGEPVKTFKPT
CHHHHHHHHHHCCCCCHHHHHHHHHEEEECCCCCCEEEEEEEEEEEEECCCCCCHHCCCE
ILGMNADTFCYAALTLPPGSSSLVSLPLYVSDNAMGGNYLLRVKVKITGSDWVAVTEDQK
EEECCCCCEEEEEEEECCCCCCEEEEEEEEECCCCCCCEEEEEEEEEECCCEEEEECCCE
ITAVSRKWGPIMITFASALLGLTAVSLFFSRSKEIMDRFKTRNLVMISLFGTVSFAAINL
EEEECCCCCCEEEHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCEEEEEEECCCEEEEECC
PMTILWELSHAIFGPFSFLFTGLFHEVLLYMLIASLVVLIPKPGVISLFMVVRFLLGGFI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
TGSFTPITFITLSLSAVILESMMYVTGITGKTPDPENRIRMGVVCGIADMVSGYASFSVW
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHEEEEHEECHHHHHHHHHHHHHH
MVLYRLFYSNWYIMANILIDGFLYTFIGAWFGISLGNRLKKVAE
HHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKNIAFILLVLMLVLQPATARAQEDFEPEEMTSFMIQVPHGVDGSGLAVGGSNLSAYVFF
CCHHHHHHHHHHHHCCCCCHHHCCCCCHHHHHEEEEECCCCCCCCCEEECCCCCEEEEEE
ESYYSGDMNVTLELDLPEGFVLQDTPVHSFSLQTEYDDWYRLVDIYIPEDLHSGTYDITA
EEECCCCEEEEEEEECCCCEEEECCCCCEEEEECCCCCEEEEEEEEECCCCCCCCEEEEE
TAVVDVNGNEHTIVRRTRLRVASKEEVADEITITGVIVPSDEDGYGDPSHPSNTLVIRET
EEEEEECCCCEEEEEEHHHHHCCHHHHCCEEEEEEEEEECCCCCCCCCCCCCCEEEEEEC
SPALKKLLKVTDLRIDRKELTSTFMGVEVSNKGENTVPVVITYDILDIRTGEPVKTFKPT
CHHHHHHHHHHCCCCCHHHHHHHHHEEEECCCCCCEEEEEEEEEEEEECCCCCCHHCCCE
ILGMNADTFCYAALTLPPGSSSLVSLPLYVSDNAMGGNYLLRVKVKITGSDWVAVTEDQK
EEECCCCCEEEEEEEECCCCCCEEEEEEEEECCCCCCCEEEEEEEEEECCCEEEEECCCE
ITAVSRKWGPIMITFASALLGLTAVSLFFSRSKEIMDRFKTRNLVMISLFGTVSFAAINL
EEEECCCCCCEEEHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCEEEEEEECCCEEEEECC
PMTILWELSHAIFGPFSFLFTGLFHEVLLYMLIASLVVLIPKPGVISLFMVVRFLLGGFI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
TGSFTPITFITLSLSAVILESMMYVTGITGKTPDPENRIRMGVVCGIADMVSGYASFSVW
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHEEEEHEECHHHHHHHHHHHHHH
MVLYRLFYSNWYIMANILIDGFLYTFIGAWFGISLGNRLKKVAE
HHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA