| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
Click here to switch to the map view.
The map label for this gene is 21228094
Identifier: 21228094
GI number: 21228094
Start: 2370712
End: 2370921
Strand: Reverse
Name: 21228094
Synonym: MM_1992
Alternate gene names: NA
Gene position: 2370921-2370712 (Counterclockwise)
Preceding gene: 21228095
Following gene: 21228093
Centisome position: 57.88
GC content: 46.19
Gene sequence:
>210_bases TTGAAACCGTTTTATCCGGGATGGAGAATCTCTCCTCCGTCAGGCCGCAGCTATTGTGAAAGCAAAACATATTTTCGTGC AGACCTGTCTCACCCGTGCAGGAGGGGTTATAACTGCATTATCTTGATCGTCACAGCCGGCGAAGAAAAGAGGTCTTCCC TAAAATATGAAAGAGGGATTTGCTCGGAAAAAGCCAAAGTGCAAAGCTAA
Upstream 100 bases:
>100_bases ATGCTTATCATCGGAACGTATCAGTTCCGAAAGGCAGTTGTGTGAAAAAAATTAATTGAAAGACATCCAGCTTGGCTGTA AGATATAATCAGGCAAGAAA
Downstream 100 bases:
>100_bases ATAATTCAATTTTTCATACAATAAGAATAGTTTAATTTTATAAATAAAAATTATGTAAAAATATATTCATGAAAATTCAG AATAATTCTTTTTTGACCAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 69; Mature: 69
Protein sequence:
>69_residues MKPFYPGWRISPPSGRSYCESKTYFRADLSHPCRRGYNCIILIVTAGEEKRSSLKYERGICSEKAKVQS
Sequences:
>Translated_69_residues MKPFYPGWRISPPSGRSYCESKTYFRADLSHPCRRGYNCIILIVTAGEEKRSSLKYERGICSEKAKVQS >Mature_69_residues MKPFYPGWRISPPSGRSYCESKTYFRADLSHPCRRGYNCIILIVTAGEEKRSSLKYERGICSEKAKVQS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7934; Mature: 7934
Theoretical pI: Translated: 9.80; Mature: 9.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.8 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 7.2 %Cys+Met (Translated Protein) 5.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 7.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPFYPGWRISPPSGRSYCESKTYFRADLSHPCRRGYNCIILIVTAGEEKRSSLKYERGI CCCCCCCCEECCCCCCCCCCCCCEEECCCCCHHHCCCCEEEEEEECCCCCHHHCCHHCCC CSEKAKVQS CCCCCCCCC >Mature Secondary Structure MKPFYPGWRISPPSGRSYCESKTYFRADLSHPCRRGYNCIILIVTAGEEKRSSLKYERGI CCCCCCCCEECCCCCCCCCCCCCEEECCCCCHHHCCCCEEEEEEECCCCCHHHCCHHCCC CSEKAKVQS CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA