Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21228089

Identifier: 21228089

GI number: 21228089

Start: 2366957

End: 2367346

Strand: Reverse

Name: 21228089

Synonym: MM_1987

Alternate gene names: NA

Gene position: 2367346-2366957 (Counterclockwise)

Preceding gene: 21228090

Following gene: 21228083

Centisome position: 57.79

GC content: 33.33

Gene sequence:

>390_bases
TTGAAGAAAAAGGTAAAAAATTATGTAGTTGAAACAGTTCAACGTATCATCTTTGGAGATCCTGATGAGATATTCGAAAT
GCTTGGAGCTGATGCGGATAGTTATATTGGAACTTCTTATGCAGAAAGGATTAACCTTACGATAAGGACATCTCTTGCAA
GATTTATAAGAAAAGGAATGAATTTCAGTAAAACCAAAAGGATGCATCAGAAAGCTATTGATTTATTCCAGGCATGGTAT
AACTTTATAAAACCTCATAAGTCTCTAAGGCTAAAAATAGATTCTGGAAACAGAAAATGGTTTCAAAGGACTCCAGCTAT
GGCAGAAGGAATAACTGATCACATATGGAGTTTAAAGGAACTATTAACATTTAGAGTTCCTGTTCAATAA

Upstream 100 bases:

>100_bases
AAACGTTTATGGTAAAATCGAGTTGCCACAATACAAAGGTATCGGAAGAAAACCGCTACCTAAACTGGTTCCACCTGACG
ATTTAAAATATGTCAAAGTA

Downstream 100 bases:

>100_bases
TATGAGGACACGACCGAAAAATAGAGAGGAGAAAAATAGAGAGGAGAAAAATAGAGAGGAGAAAAATAGAGAGGAGAAAA
ATAGAGAGGAGAAAAATAGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 129; Mature: 129

Protein sequence:

>129_residues
MKKKVKNYVVETVQRIIFGDPDEIFEMLGADADSYIGTSYAERINLTIRTSLARFIRKGMNFSKTKRMHQKAIDLFQAWY
NFIKPHKSLRLKIDSGNRKWFQRTPAMAEGITDHIWSLKELLTFRVPVQ

Sequences:

>Translated_129_residues
MKKKVKNYVVETVQRIIFGDPDEIFEMLGADADSYIGTSYAERINLTIRTSLARFIRKGMNFSKTKRMHQKAIDLFQAWY
NFIKPHKSLRLKIDSGNRKWFQRTPAMAEGITDHIWSLKELLTFRVPVQ
>Mature_129_residues
MKKKVKNYVVETVQRIIFGDPDEIFEMLGADADSYIGTSYAERINLTIRTSLARFIRKGMNFSKTKRMHQKAIDLFQAWY
NFIKPHKSLRLKIDSGNRKWFQRTPAMAEGITDHIWSLKELLTFRVPVQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15183; Mature: 15183

Theoretical pI: Translated: 10.69; Mature: 10.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKKVKNYVVETVQRIIFGDPDEIFEMLGADADSYIGTSYAERINLTIRTSLARFIRKGM
CCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
NFSKTKRMHQKAIDLFQAWYNFIKPHKSLRLKIDSGNRKWFQRTPAMAEGITDHIWSLKE
CHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHCCHHHHHHHHHHHHHHH
LLTFRVPVQ
HHHHCCCCC
>Mature Secondary Structure
MKKKVKNYVVETVQRIIFGDPDEIFEMLGADADSYIGTSYAERINLTIRTSLARFIRKGM
CCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
NFSKTKRMHQKAIDLFQAWYNFIKPHKSLRLKIDSGNRKWFQRTPAMAEGITDHIWSLKE
CHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHCCHHHHHHHHHHHHHHH
LLTFRVPVQ
HHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA