Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

Click here to switch to the map view.

The map label for this gene is 21228062

Identifier: 21228062

GI number: 21228062

Start: 2328477

End: 2328791

Strand: Direct

Name: 21228062

Synonym: MM_1960

Alternate gene names: NA

Gene position: 2328477-2328791 (Clockwise)

Preceding gene: 21228061

Following gene: 21228069

Centisome position: 56.84

GC content: 43.81

Gene sequence:

>315_bases
ATGGTTCTTACTTTTGTTTTTTATTTTATTCCGGTGGTAAATTCCGTAGCTCCTCTTCTCGGAGGCTTTCTGGCTGGTTA
TTATGCAGACGGCGGGTTTGAAGGAGGGCTTAAGTCAGGAGTATTGATGACTGTTTTCATGATAATCCCTGTCTTCCTGC
TTGGCGGGGTTCTTGGGACTGTACTGCGCAATTCTCCAGTTCTGGGGGGATTTATAGCAGCCTCTACTTTAATAGTTGCA
CTGGTTGTCATAATTCATACTGCAATAACAGGCATTATTGGTTCTGTAGCAGGAGCTCTTGTAGCTGGAAGATAA

Upstream 100 bases:

>100_bases
CAGTTTATATAATTAAAGTTTATTTAATTTCCAGTTATTCAATCTGTTTTAACGTGGGGGTACAGTAATGGGCAGAACTA
TCAGCGGTGCATTAATAGGT

Downstream 100 bases:

>100_bases
GTTTCGAAATAGTTTGCCGTCAGAATTTAAACACCTTCATTTAAATACTCAGGCTTCGGTGTAAAAATGAAAAATAAAGG
TGAAGAAAAAAATCTTTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 104; Mature: 104

Protein sequence:

>104_residues
MVLTFVFYFIPVVNSVAPLLGGFLAGYYADGGFEGGLKSGVLMTVFMIIPVFLLGGVLGTVLRNSPVLGGFIAASTLIVA
LVVIIHTAITGIIGSVAGALVAGR

Sequences:

>Translated_104_residues
MVLTFVFYFIPVVNSVAPLLGGFLAGYYADGGFEGGLKSGVLMTVFMIIPVFLLGGVLGTVLRNSPVLGGFIAASTLIVA
LVVIIHTAITGIIGSVAGALVAGR
>Mature_104_residues
MVLTFVFYFIPVVNSVAPLLGGFLAGYYADGGFEGGLKSGVLMTVFMIIPVFLLGGVLGTVLRNSPVLGGFIAASTLIVA
LVVIIHTAITGIIGSVAGALVAGR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10542; Mature: 10542

Theoretical pI: Translated: 9.06; Mature: 9.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLTFVFYFIPVVNSVAPLLGGFLAGYYADGGFEGGLKSGVLMTVFMIIPVFLLGGVLGT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
VLRNSPVLGGFIAASTLIVALVVIIHTAITGIIGSVAGALVAGR
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVLTFVFYFIPVVNSVAPLLGGFLAGYYADGGFEGGLKSGVLMTVFMIIPVFLLGGVLGT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
VLRNSPVLGGFIAASTLIVALVVIIHTAITGIIGSVAGALVAGR
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA