| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is ubiE [H]
Identifier: 21228051
GI number: 21228051
Start: 2318101
End: 2318901
Strand: Reverse
Name: ubiE [H]
Synonym: MM_1949
Alternate gene names: 21228051
Gene position: 2318901-2318101 (Counterclockwise)
Preceding gene: 21228053
Following gene: 21228049
Centisome position: 56.61
GC content: 45.07
Gene sequence:
>801_bases ATGACCGAGTATGTGCATGGTTATTCGGAAAGAGAGGCTCTCCGCCTTTCAGAACAGGCTGAAACACTTGAAAAACTTCT CCACCATGACACCGTATATCCACCCGGAGCAAAAGTGCTCGAAGCCGGCTGCGGAATAGGAGCCCAGACTGTAATCCTGG CAAAAAACAACCCTGATGCGGAAATTACTTCGATTGACATTTCCCCGGAATCCCTTGAAAAAGCCAGGGAAAATACTGAA AAAAATGGGATTAAAAATGTTAAATTCCTGCAGGCAAATATTTTTTCTCTTCCTTTTGAGGACAGCAGTTTTGACCACAT TTTTGTCTGTTTCGTGCTTGAGCACCTGCAAAGCCCTGAAGAAGCCTTAAAAAGCCTGAAGAAAGTCCTCAAGCCCGGAG GCACGATTACAGTAATCGAAGGAGACCATGGGTCCTGCTACTTCCATCCTGAAGGAAAAAAAGCCATTGAAGCCTGGAAC TGTCTCATCCGGGTTCAGGCTTACATGAAAGGAAACTCCCTGGTCGGCCGCCAGATTTACCCCCTTCTACAGGAGTCCGG GTTTGAAAAAATAAGAGTGGAGCCACGAATGGTCTATATAGATTCCAGCAAACCCGAACTTGTGGACGGCTTCATCCTGA AAACCATCATCCCTATGGTAGAAGGCGTAAAAGAACAGTCCCTGAAAATGCAGATAATTAAAGAAGAAGAATGGGAAAAA GGAATAGAAGAACTCCATAAGACTGCAGAACACGGAGGAACCTTCTGCTATACTTTCTTTAAAGGATGGGGGACAAAATG A
Upstream 100 bases:
>100_bases CGCATCTCAAGGACAGCTGTGGAAAAACTCATTAAAAACAGAAGATGCTGACCAGTGCAAGTTAATATAAATTTAATTCA GAAAAAGGGGATCATAAGAC
Downstream 100 bases:
>100_bases GAACCTAACTTGAGATGGATATCTATCTTAAAAATTCAAAGAGAAAGATGGGCCTGTTTTCAGGACACATTCTTCCAGAA TACTTGCAAAAACCGATTCT
Product: methyltransferase
Products: S-Adenosyl-L-Homocysteine; @OCTA02.txt*2- Polyprenyl-3-Methyl-6-Methoxy-1,4-Benzoquinol!; Menaquinol. [C]
Alternate protein names: NA
Number of amino acids: Translated: 266; Mature: 265
Protein sequence:
>266_residues MTEYVHGYSEREALRLSEQAETLEKLLHHDTVYPPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTE KNGIKNVKFLQANIFSLPFEDSSFDHIFVCFVLEHLQSPEEALKSLKKVLKPGGTITVIEGDHGSCYFHPEGKKAIEAWN CLIRVQAYMKGNSLVGRQIYPLLQESGFEKIRVEPRMVYIDSSKPELVDGFILKTIIPMVEGVKEQSLKMQIIKEEEWEK GIEELHKTAEHGGTFCYTFFKGWGTK
Sequences:
>Translated_266_residues MTEYVHGYSEREALRLSEQAETLEKLLHHDTVYPPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTE KNGIKNVKFLQANIFSLPFEDSSFDHIFVCFVLEHLQSPEEALKSLKKVLKPGGTITVIEGDHGSCYFHPEGKKAIEAWN CLIRVQAYMKGNSLVGRQIYPLLQESGFEKIRVEPRMVYIDSSKPELVDGFILKTIIPMVEGVKEQSLKMQIIKEEEWEK GIEELHKTAEHGGTFCYTFFKGWGTK >Mature_265_residues TEYVHGYSEREALRLSEQAETLEKLLHHDTVYPPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEK NGIKNVKFLQANIFSLPFEDSSFDHIFVCFVLEHLQSPEEALKSLKKVLKPGGTITVIEGDHGSCYFHPEGKKAIEAWNC LIRVQAYMKGNSLVGRQIYPLLQESGFEKIRVEPRMVYIDSSKPELVDGFILKTIIPMVEGVKEQSLKMQIIKEEEWEKG IEELHKTAEHGGTFCYTFFKGWGTK
Specific function: Methyltransferase required for the conversion of dimethylmenaquinone (DMKH2) to menaquinone (MKH2) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methyltransferase superfamily. UbiE family [H]
Homologues:
Organism=Escherichia coli, GI48994983, Length=107, Percent_Identity=35.5140186915888, Blast_Score=66, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004033 [H]
Pfam domain/function: PF01209 Ubie_methyltran [H]
EC number: 2.1.1.- [C]
Molecular weight: Translated: 29974; Mature: 29842
Theoretical pI: Translated: 5.63; Mature: 5.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEYVHGYSEREALRLSEQAETLEKLLHHDTVYPPGAKVLEAGCGIGAQTVILAKNNPDA CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCEEEEEECCCCCC EITSIDISPESLEKARENTEKNGIKNVKFLQANIFSLPFEDSSFDHIFVCFVLEHLQSPE EEEEEECCHHHHHHHHHHHHHCCCCCEEEEEEHHEECCCCCCCCCHHHHHHHHHHHCCHH EALKSLKKVLKPGGTITVIEGDHGSCYFHPEGKKAIEAWNCLIRVQAYMKGNSLVGRQIY HHHHHHHHHHCCCCEEEEEECCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHH PLLQESGFEKIRVEPRMVYIDSSKPELVDGFILKTIIPMVEGVKEQSLKMQIIKEEEWEK HHHHHCCCCEEEECCEEEEEECCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH GIEELHKTAEHGGTFCYTFFKGWGTK HHHHHHHHHHHCCCEEEEEECCCCCC >Mature Secondary Structure TEYVHGYSEREALRLSEQAETLEKLLHHDTVYPPGAKVLEAGCGIGAQTVILAKNNPDA CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCEEEEEECCCCCC EITSIDISPESLEKARENTEKNGIKNVKFLQANIFSLPFEDSSFDHIFVCFVLEHLQSPE EEEEEECCHHHHHHHHHHHHHCCCCCEEEEEEHHEECCCCCCCCCHHHHHHHHHHHCCHH EALKSLKKVLKPGGTITVIEGDHGSCYFHPEGKKAIEAWNCLIRVQAYMKGNSLVGRQIY HHHHHHHHHHCCCCEEEEEECCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHH PLLQESGFEKIRVEPRMVYIDSSKPELVDGFILKTIIPMVEGVKEQSLKMQIIKEEEWEK HHHHHCCCCEEEECCEEEEEECCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH GIEELHKTAEHGGTFCYTFFKGWGTK HHHHHHHHHHHCCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: S-Adenosyl-L-Methionine; 2-Polyprenyl-6- Methoxy-1,4-Benzoquinol; Demethylmenaquinol [C]
Specific reaction: S-Adenosyl-L-Methionine + @OCTA02.txt*2-Polyprenyl-6- Methoxy-1,4-Benzoquinol! = S-Adenosyl-L-Homocysteine + 2- Polyprenyl-3-Methyl-6-Methoxy -1,4-Benzoquinol S-Adenosyl-L-Methionine + Demethylmenaquinol = S-Adenosyl-L-Homocysteine + Menaquinol. [C]
General reaction: Transferring one-carbon groups; Methyltransferases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA