| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21228045
Identifier: 21228045
GI number: 21228045
Start: 2311637
End: 2312392
Strand: Direct
Name: 21228045
Synonym: MM_1943
Alternate gene names: NA
Gene position: 2311637-2312392 (Clockwise)
Preceding gene: 21228044
Following gene: 21228046
Centisome position: 56.43
GC content: 44.58
Gene sequence:
>756_bases ATGGAAAACCAGAGTGAAAAGATGTATAATGACAGCCTTATGAGTAGCTATGATTACAGTATAACCATAACAAGCAACAG CACTCTTCAAAATGTAACTCTATATTTGCCTGTTCCGGTTTTTGATAATAAATCCGGGATCGGGCTGGAAATGGTGAATG GAGACTATTACAATAAGCCTTCGGACTGGAATCTCAGCCTTGAAGATACTGAATACGGGTTAATGTTCAAAATAGAAGCT GCCGAAATTCAGCCGGTCTATCATTCTCTTCCTGTGGCTGTGCCAGAGCCTGAGCCCGGGTCTGATGATTTTGAAAATGA AATTCCGGAGGCGGAGCAGATTGTGGAATCTCACGAGTACTCCGAGGAAACTCCGGTTCTCGCCTCAATTGACTTCGGGA CCTCCTTAAAAGCCGACCATCCGATCAATACAAGATTCCCTTATGGCAACGAATCCGTACTTCTGCCCAAACATAATCTC AGGGAATCCGAAGAAAGACCGGAAATACCTTTACCCGATTATATTAATCCCGCATATTTCGATTATGAAAGCATGGTGTA CGCAAATTATGATGCATCTCCTGATGCTGAGGTCCAGATTTTCGTCGAGATGGAGGGCAGAAACGAGTGGTGGATCTACG GCTGGCAATTCAACGAATACACTGATAGGATCTCTATACAGCTAGCAGGCCCGCAGGAAGGCTGGGTTCGGGCGGAAGGA AAACTTACTACAGGAGATGGAATTTACAGAGAATAA
Upstream 100 bases:
>100_bases AGTCTTTAAAGAAGAGGGTCTGCAAATGAATAAATGGATAAAAATTCTTGGAGGGCTCATCTTATTTGTTCTCCTTCTGT TCATTTTGGGTTCCCTGTAC
Downstream 100 bases:
>100_bases CCCTCTTCCCCTTCTTCTTCTTCTTCTTCTTCTTTTTTATTTTTACGAAAACAGGTTTGGTACAAAATGGCTGCCCCGCC AAGTTTCTTATGGCTTTCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 251; Mature: 251
Protein sequence:
>251_residues MENQSEKMYNDSLMSSYDYSITITSNSTLQNVTLYLPVPVFDNKSGIGLEMVNGDYYNKPSDWNLSLEDTEYGLMFKIEA AEIQPVYHSLPVAVPEPEPGSDDFENEIPEAEQIVESHEYSEETPVLASIDFGTSLKADHPINTRFPYGNESVLLPKHNL RESEERPEIPLPDYINPAYFDYESMVYANYDASPDAEVQIFVEMEGRNEWWIYGWQFNEYTDRISIQLAGPQEGWVRAEG KLTTGDGIYRE
Sequences:
>Translated_251_residues MENQSEKMYNDSLMSSYDYSITITSNSTLQNVTLYLPVPVFDNKSGIGLEMVNGDYYNKPSDWNLSLEDTEYGLMFKIEA AEIQPVYHSLPVAVPEPEPGSDDFENEIPEAEQIVESHEYSEETPVLASIDFGTSLKADHPINTRFPYGNESVLLPKHNL RESEERPEIPLPDYINPAYFDYESMVYANYDASPDAEVQIFVEMEGRNEWWIYGWQFNEYTDRISIQLAGPQEGWVRAEG KLTTGDGIYRE >Mature_251_residues MENQSEKMYNDSLMSSYDYSITITSNSTLQNVTLYLPVPVFDNKSGIGLEMVNGDYYNKPSDWNLSLEDTEYGLMFKIEA AEIQPVYHSLPVAVPEPEPGSDDFENEIPEAEQIVESHEYSEETPVLASIDFGTSLKADHPINTRFPYGNESVLLPKHNL RESEERPEIPLPDYINPAYFDYESMVYANYDASPDAEVQIFVEMEGRNEWWIYGWQFNEYTDRISIQLAGPQEGWVRAEG KLTTGDGIYRE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28776; Mature: 28776
Theoretical pI: Translated: 3.84; Mature: 3.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENQSEKMYNDSLMSSYDYSITITSNSTLQNVTLYLPVPVFDNKSGIGLEMVNGDYYNKP CCCCHHHHHHHHHHCCCCEEEEEECCCCEEEEEEEEEEEEECCCCCCEEEEECCCCCCCC SDWNLSLEDTEYGLMFKIEAAEIQPVYHSLPVAVPEPEPGSDDFENEIPEAEQIVESHEY CCCEEEECCCCCEEEEEEEHHHCCCHHHHCCEECCCCCCCCCCHHHCCCHHHHHHHHHCC SEETPVLASIDFGTSLKADHPINTRFPYGNESVLLPKHNLRESEERPEIPLPDYINPAYF CCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCEE DYESMVYANYDASPDAEVQIFVEMEGRNEWWIYGWQFNEYTDRISIQLAGPQEGWVRAEG CCCCEEEEECCCCCCCEEEEEEEECCCCEEEEEEEEECCCCCEEEEEEECCCCCEEEECC KLTTGDGIYRE EEECCCCCCCC >Mature Secondary Structure MENQSEKMYNDSLMSSYDYSITITSNSTLQNVTLYLPVPVFDNKSGIGLEMVNGDYYNKP CCCCHHHHHHHHHHCCCCEEEEEECCCCEEEEEEEEEEEEECCCCCCEEEEECCCCCCCC SDWNLSLEDTEYGLMFKIEAAEIQPVYHSLPVAVPEPEPGSDDFENEIPEAEQIVESHEY CCCEEEECCCCCEEEEEEEHHHCCCHHHHCCEECCCCCCCCCCHHHCCCHHHHHHHHHCC SEETPVLASIDFGTSLKADHPINTRFPYGNESVLLPKHNLRESEERPEIPLPDYINPAYF CCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCEE DYESMVYANYDASPDAEVQIFVEMEGRNEWWIYGWQFNEYTDRISIQLAGPQEGWVRAEG CCCCEEEEECCCCCCCEEEEEEEECCCCEEEEEEEEECCCCCEEEEEEECCCCCEEEECC KLTTGDGIYRE EEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA